RNA–Protein interactions for RNA: ENST00000269468.9

MBD1-201, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene MBD1, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-201ENST00000269468 SPC24Q8NBT2 197 aa17.43■□□□□ 0.38
MBD1-201ENST00000269468 SRCIN1Q9C0H9 1055 aa17.43■□□□□ 0.38
MBD1-201ENST00000269468 A0A0U1RQG5 324 aaPredicted RBP17.43■□□□□ 0.38
MBD1-201ENST00000269468 KIF3AQ9Y496 699 aa17.43■□□□□ 0.38
MBD1-201ENST00000269468 WDR33Q9C0J8 1336 aaKnown RBP17.42■□□□□ 0.38
MBD1-201ENST00000269468 NECTIN2Q92692 538 aa17.42■□□□□ 0.38
MBD1-201ENST00000269468 COG3Q96JB2 828 aa17.42■□□□□ 0.38
MBD1-201ENST00000269468 MX1P20591 662 aa17.42■□□□□ 0.38
MBD1-201ENST00000269468 CHMLP26374 656 aa17.42■□□□□ 0.38
MBD1-201ENST00000269468 HMGN5P82970 282 aaKnown RBP17.42■□□□□ 0.38
MBD1-201ENST00000269468 UNC5CLQ8IV45 518 aa17.42■□□□□ 0.38
MBD1-201ENST00000269468 PRIMPOLQ96LW4 560 aa17.42■□□□□ 0.38
MBD1-201ENST00000269468 PODXL2Q9NZ53 605 aa17.42■□□□□ 0.38
MBD1-201ENST00000269468 RGS12O14924 1447 aa17.41■□□□□ 0.38
MBD1-201ENST00000269468 TCHHQ07283 1943 aa17.41■□□□□ 0.38
MBD1-201ENST00000269468 GIMAP6Q6P9H5 292 aa17.41■□□□□ 0.38
MBD1-201ENST00000269468 INTS4Q96HW7 963 aaKnown RBP17.41■□□□□ 0.38
MBD1-201ENST00000269468 POGZQ7Z3K3 1410 aa17.41■□□□□ 0.38
MBD1-201ENST00000269468 CCDC183Q5T5S1 534 aa17.41■□□□□ 0.38
MBD1-201ENST00000269468 FAM184AQ8NB25 1140 aa17.41■□□□□ 0.38
MBD1-201ENST00000269468 LRRCC1Q9C099 1032 aa17.41■□□□□ 0.38
MBD1-201ENST00000269468 ASXL2Q76L83 1435 aa17.4■□□□□ 0.38
MBD1-201ENST00000269468 ZSCAN20P17040 1043 aaPredicted RBP17.4■□□□□ 0.38
MBD1-201ENST00000269468 ATP2B3Q16720 1220 aa17.4■□□□□ 0.38
MBD1-201ENST00000269468 IL1RAPL2Q9NP60 686 aa17.4■□□□□ 0.38
MBD1-201ENST00000269468 SIGLEC1Q9BZZ2 1709 aa17.4■□□□□ 0.38
MBD1-201ENST00000269468 IL25Q9H293 177 aa17.39■□□□□ 0.38
MBD1-201ENST00000269468 OSBPL3Q9H4L5 887 aa17.39■□□□□ 0.38
MBD1-201ENST00000269468 DLG5Q8TDM6 1919 aa17.39■□□□□ 0.37
MBD1-201ENST00000269468 HAP1P54257 671 aaPredicted RBP17.39■□□□□ 0.37
MBD1-201ENST00000269468 CHMP3Q9Y3E7 222 aa17.39■□□□□ 0.37
MBD1-201ENST00000269468 CDC42BPGQ6DT37 1551 aa17.39■□□□□ 0.37
MBD1-201ENST00000269468 KIF20BQ96Q89 1820 aa17.39■□□□□ 0.37
MBD1-201ENST00000269468 CHL1O00533 1208 aa17.39■□□□□ 0.37
MBD1-201ENST00000269468 IGSF3O75054 1194 aa17.39■□□□□ 0.37
MBD1-201ENST00000269468 GNAI2P04899 355 aa17.39■□□□□ 0.37
MBD1-201ENST00000269468 UVSSAQ2YD98 709 aa17.39■□□□□ 0.37
MBD1-201ENST00000269468 FBXO31Q5XUX0 539 aaPredicted RBP17.39■□□□□ 0.37
MBD1-201ENST00000269468 BCL2L12Q9HB09 334 aa17.39■□□□□ 0.37
MBD1-201ENST00000269468 PTPRCP08575 1304 aa17.39■□□□□ 0.37
MBD1-201ENST00000269468 PNMA6EA0A0J9YXQ4 647 aa17.38■□□□□ 0.37
MBD1-201ENST00000269468 DMTNQ08495 405 aa17.38■□□□□ 0.37
MBD1-201ENST00000269468 YEATS2Q9ULM3 1422 aa17.38■□□□□ 0.37
MBD1-201ENST00000269468 BCL11BQ9C0K0 894 aaPredicted RBP17.38■□□□□ 0.37
MBD1-201ENST00000269468 FRMPD1Q5SYB0 1578 aa17.37■□□□□ 0.37
MBD1-201ENST00000269468 SLC52A1Q9NWF4 448 aa17.37■□□□□ 0.37
MBD1-201ENST00000269468 KDM4AO75164 1064 aa17.37■□□□□ 0.37
MBD1-201ENST00000269468 NUTM1Q86Y26 1132 aa17.37■□□□□ 0.37
MBD1-201ENST00000269468 PYCARDQ9ULZ3 195 aa17.36■□□□□ 0.37
MBD1-201ENST00000269468 CPA1P15085 419 aa17.36■□□□□ 0.37
MBD1-201ENST00000269468 ANAPC15P60006 121 aa17.36■□□□□ 0.37
MBD1-201ENST00000269468 HECW2Q9P2P5 1572 aa17.36■□□□□ 0.37
MBD1-201ENST00000269468 FOXO3O43524 673 aa17.36■□□□□ 0.37
MBD1-201ENST00000269468 FKBP5Q13451 457 aaPredicted RBP17.36■□□□□ 0.37
MBD1-201ENST00000269468 PDCL2Q8N4E4 241 aa17.36■□□□□ 0.37
MBD1-201ENST00000269468 CHAF1AQ13111 956 aaPredicted RBP17.35■□□□□ 0.37
MBD1-201ENST00000269468 TSPYL4Q9UJ04 414 aa17.35■□□□□ 0.37
MBD1-201ENST00000269468 ZSCAN22P10073 491 aaPredicted RBP17.35■□□□□ 0.37
MBD1-201ENST00000269468 RIOK3O14730 519 aaKnown RBP17.34■□□□□ 0.37
MBD1-201ENST00000269468 AP5Z1O43299 807 aa17.34■□□□□ 0.37
MBD1-201ENST00000269468 NPM1P06748 294 aaKnown RBP eCLIP17.34■□□□□ 0.37
MBD1-201ENST00000269468 EIF4A2Q14240 407 aaKnown RBP17.34■□□□□ 0.37
MBD1-201ENST00000269468 SYT1P21579 422 aa17.34■□□□□ 0.37
MBD1-201ENST00000269468 CCT4P50991 539 aaKnown RBP17.34■□□□□ 0.37
MBD1-201ENST00000269468 PIK3C2BO00750 1634 aa17.34■□□□□ 0.37
MBD1-201ENST00000269468 STX6O43752 255 aa17.34■□□□□ 0.37
MBD1-201ENST00000269468 U2AF2P26368 475 aaKnown RBP eCLIP17.34■□□□□ 0.373e-7■■□□□ 12.2
MBD1-201ENST00000269468 UBE2HP62256 183 aa17.34■□□□□ 0.37
MBD1-201ENST00000269468 SMC3Q9UQE7 1217 aa17.34■□□□□ 0.37
MBD1-201ENST00000269468 RPAP1Q9BWH6 1393 aaPredicted RBP17.33■□□□□ 0.37
MBD1-201ENST00000269468 NUTM2FA1L443 756 aa17.33■□□□□ 0.36
MBD1-201ENST00000269468 DDX54Q8TDD1 881 aaKnown RBP17.33■□□□□ 0.36
MBD1-201ENST00000269468 AK2P54819 239 aa17.32■□□□□ 0.36
MBD1-201ENST00000269468 DNM1Q05193 864 aaKnown RBP17.32■□□□□ 0.36
MBD1-201ENST00000269468 KCNF1Q9H3M0 494 aa17.32■□□□□ 0.36
MBD1-201ENST00000269468 LRRFIP2Q9Y608 721 aaKnown RBP17.32■□□□□ 0.36
MBD1-201ENST00000269468 MYO5BQ9ULV0 1848 aa17.32■□□□□ 0.36
MBD1-201ENST00000269468 GTF2F1P35269 517 aaKnown RBP eCLIP17.32■□□□□ 0.361e-8■■■□□ 15.2
MBD1-201ENST00000269468 CPSF1Q10570 1443 aaKnown RBP17.32■□□□□ 0.36
MBD1-201ENST00000269468 STK31Q9BXU1 1019 aa17.32■□□□□ 0.36
MBD1-201ENST00000269468 VPS37CA5D8V6 355 aaPredicted RBP17.31■□□□□ 0.36
MBD1-201ENST00000269468 LETM1O95202 739 aaPredicted RBP17.31■□□□□ 0.36
MBD1-201ENST00000269468 SPTLC3Q9NUV7 552 aa17.31■□□□□ 0.36
MBD1-201ENST00000269468 SALL3Q9BXA9 1300 aa17.31■□□□□ 0.36
MBD1-201ENST00000269468 CDK12Q9NYV4 1490 aaPredicted RBP17.31■□□□□ 0.36
MBD1-201ENST00000269468 HSP90AB2PQ58FF8 381 aa17.31■□□□□ 0.36
MBD1-201ENST00000269468 TXNDC2Q86VQ3 553 aa17.31■□□□□ 0.36
MBD1-201ENST00000269468 KIAA1524Q8TCG1 905 aa17.31■□□□□ 0.36
MBD1-201ENST00000269468 SPG7Q9UQ90 795 aa17.31■□□□□ 0.36
MBD1-201ENST00000269468 F13A1P00488 732 aa17.31■□□□□ 0.36
MBD1-201ENST00000269468 HSPA4P34932 840 aa17.31■□□□□ 0.36
MBD1-201ENST00000269468 CAMK4Q16566 473 aa17.31■□□□□ 0.36
MBD1-201ENST00000269468 UTP14CQ5TAP6 766 aaKnown RBP17.31■□□□□ 0.36
MBD1-201ENST00000269468 CCDC83Q8IWF9 413 aa17.31■□□□□ 0.36
MBD1-201ENST00000269468 RASEFQ8IZ41 740 aa17.31■□□□□ 0.36
MBD1-201ENST00000269468 RTF1Q92541 710 aaKnown RBP17.31■□□□□ 0.36
MBD1-201ENST00000269468 NUDT16Q96DE0 195 aaKnown RBP17.31■□□□□ 0.36
MBD1-201ENST00000269468 DIAPH3Q9NSV4 1193 aa17.3■□□□□ 0.36
MBD1-201ENST00000269468 WASLO00401 505 aaPredicted RBP17.29■□□□□ 0.36
MBD1-201ENST00000269468 SNX14Q9Y5W7 946 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms