RNA–Protein interactions for RNA: ENST00000266743.6

SYCP3-201, Transcript of synaptonemal complex protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCP3, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP3-201ENST00000266743 LINC00116Q8NCU8 138 aa14.04□□□□□ -0.16
SYCP3-201ENST00000266743 ROCK2O75116 1388 aaKnown RBP14.04□□□□□ -0.16
SYCP3-201ENST00000266743 PXDNLA1KZ92 1463 aa14.04□□□□□ -0.16
SYCP3-201ENST00000266743 MON2Q7Z3U7 1717 aa14.04□□□□□ -0.16
SYCP3-201ENST00000266743 C19orf67A6NJJ6 358 aa14.03□□□□□ -0.16
SYCP3-201ENST00000266743 RRS1Q15050 365 aaKnown RBP14.03□□□□□ -0.16
SYCP3-201ENST00000266743 C9orf131Q5VYM1 1079 aa14.03□□□□□ -0.16
SYCP3-201ENST00000266743 C16orf71Q8IYS4 520 aaPredicted RBP14.03□□□□□ -0.16
SYCP3-201ENST00000266743 C5P01031 1676 aa14.03□□□□□ -0.16
SYCP3-201ENST00000266743 FAM208AQ9UK61 1670 aaKnown RBP14.03□□□□□ -0.16
SYCP3-201ENST00000266743 EDC4Q6P2E9 1401 aaKnown RBP14.02□□□□□ -0.16
SYCP3-201ENST00000266743 A0A1W2PP64 1363 aa14.02□□□□□ -0.17
SYCP3-201ENST00000266743 DPEP1P16444 411 aa14.02□□□□□ -0.17
SYCP3-201ENST00000266743 VASPP50552 380 aaPredicted RBP14.02□□□□□ -0.17
SYCP3-201ENST00000266743 WDR90Q96KV7 1748 aa14.01□□□□□ -0.17
SYCP3-201ENST00000266743 TOGARAM1Q9Y4F4 1720 aa14.01□□□□□ -0.17
SYCP3-201ENST00000266743 PCNTO95613 3336 aa14.01□□□□□ -0.17
SYCP3-201ENST00000266743 GNPATO15228 680 aa14.01□□□□□ -0.17
SYCP3-201ENST00000266743 CYP27B1O15528 508 aa14.01□□□□□ -0.17
SYCP3-201ENST00000266743 FCHSD2O94868 740 aa14.01□□□□□ -0.17
SYCP3-201ENST00000266743 RAPGEF4Q8WZA2 1011 aa14.01□□□□□ -0.17
SYCP3-201ENST00000266743 PIGBQ92521 554 aa14.01□□□□□ -0.17
SYCP3-201ENST00000266743 RRAGCQ9HB90 399 aa14.01□□□□□ -0.17
SYCP3-201ENST00000266743 C4BP0C0L5 1744 aa14.01□□□□□ -0.17
SYCP3-201ENST00000266743 USP54Q70EL1 1684 aa14.01□□□□□ -0.17
SYCP3-201ENST00000266743 CICQ96RK0 1608 aaPredicted RBP14.01□□□□□ -0.17
SYCP3-201ENST00000266743 HSPA1AP0DMV8 641 aaKnown RBP14□□□□□ -0.17
SYCP3-201ENST00000266743 HSPA1BP0DMV9 641 aaKnown RBP14□□□□□ -0.17
SYCP3-201ENST00000266743 SSFA2P28290 1259 aa14□□□□□ -0.17
SYCP3-201ENST00000266743 ITPK1Q13572 414 aa14□□□□□ -0.17
SYCP3-201ENST00000266743 SIN3AQ96ST3 1273 aa14□□□□□ -0.17
SYCP3-201ENST00000266743 CD44P16070 742 aaKnown RBP13.99□□□□□ -0.17
SYCP3-201ENST00000266743 TATP17735 454 aaPredicted RBP13.99□□□□□ -0.17
SYCP3-201ENST00000266743 MNX1P50219 401 aaPredicted RBP13.99□□□□□ -0.17
SYCP3-201ENST00000266743 FSTL1Q12841 308 aa13.99□□□□□ -0.17
SYCP3-201ENST00000266743 COG3Q96JB2 828 aa13.99□□□□□ -0.17
SYCP3-201ENST00000266743 KCPQ6ZWJ8 1503 aa13.99□□□□□ -0.17
SYCP3-201ENST00000266743 LOC102724428A0A0B4J2F2 783 aa13.98□□□□□ -0.17
SYCP3-201ENST00000266743 SIK1P57059 783 aa13.98□□□□□ -0.17
SYCP3-201ENST00000266743 SMARCC1Q92922 1105 aaPredicted RBP13.98□□□□□ -0.17
SYCP3-201ENST00000266743 TERF2IPQ9NYB0 399 aa13.98□□□□□ -0.17
SYCP3-201ENST00000266743 RGPD2P0DJD1 1756 aa13.98□□□□□ -0.17
SYCP3-201ENST00000266743 PCDH11XQ9BZA7 1347 aa13.97□□□□□ -0.17
SYCP3-201ENST00000266743 PCDH11YQ9BZA8 1340 aa13.97□□□□□ -0.17
SYCP3-201ENST00000266743 TGFB2P61812 414 aa13.97□□□□□ -0.17
SYCP3-201ENST00000266743 ASAP1Q9ULH1 1129 aa13.97□□□□□ -0.17
SYCP3-201ENST00000266743 KCNA3P22001 575 aa13.96□□□□□ -0.17
SYCP3-201ENST00000266743 NEUROD1Q13562 356 aa13.96□□□□□ -0.17
SYCP3-201ENST00000266743 RNF181Q9P0P0 153 aa13.96□□□□□ -0.17
SYCP3-201ENST00000266743 CGNL1Q0VF96 1302 aa13.95□□□□□ -0.18
SYCP3-201ENST00000266743 HSP90AB2PQ58FF8 381 aa13.95□□□□□ -0.18
SYCP3-201ENST00000266743 TAF1LQ8IZX4 1826 aa13.94□□□□□ -0.18
SYCP3-201ENST00000266743 N4BP2Q86UW6 1770 aaPredicted RBP13.94□□□□□ -0.18
SYCP3-201ENST00000266743 ATP6V1AP38606 617 aa13.94□□□□□ -0.18
SYCP3-201ENST00000266743 UBR3Q6ZT12 1888 aa13.94□□□□□ -0.18
SYCP3-201ENST00000266743 C10orf71Q711Q0 1435 aa13.94□□□□□ -0.18
SYCP3-201ENST00000266743 NSD3Q9BZ95 1437 aa13.93□□□□□ -0.18
SYCP3-201ENST00000266743 TMF1P82094 1093 aa13.93□□□□□ -0.18
SYCP3-201ENST00000266743 GGNBP2Q9H3C7 697 aa13.93□□□□□ -0.18
SYCP3-201ENST00000266743 KIAA1551Q9HCM1 1747 aa13.93□□□□□ -0.18
SYCP3-201ENST00000266743 KDM2BQ8NHM5 1336 aa13.92□□□□□ -0.18
SYCP3-201ENST00000266743 SMC1BQ8NDV3 1235 aa13.92□□□□□ -0.18
SYCP3-201ENST00000266743 SP7Q8TDD2 431 aaPredicted RBP13.92□□□□□ -0.18
SYCP3-201ENST00000266743 CCDC87Q9NVE4 849 aa13.92□□□□□ -0.18
SYCP3-201ENST00000266743 SLC34A2O95436 690 aa13.91□□□□□ -0.18
SYCP3-201ENST00000266743 HMGB2P26583 209 aaKnown RBP13.91□□□□□ -0.18
SYCP3-201ENST00000266743 CHRNA5P30532 468 aa13.91□□□□□ -0.18
SYCP3-201ENST00000266743 EVX2Q03828 476 aa13.91□□□□□ -0.18
SYCP3-201ENST00000266743 TRAPPC3LQ5T215 181 aa13.91□□□□□ -0.18
SYCP3-201ENST00000266743 ARHGEF1Q92888 912 aaKnown RBP13.91□□□□□ -0.18
SYCP3-201ENST00000266743 CARD11Q9BXL7 1154 aa13.91□□□□□ -0.18
SYCP3-201ENST00000266743 PLEKHG2Q9H7P9 1386 aa13.91□□□□□ -0.18
SYCP3-201ENST00000266743 GYS1P13807 737 aa13.9□□□□□ -0.18
SYCP3-201ENST00000266743 RASSF7Q02833 373 aa13.9□□□□□ -0.18
SYCP3-201ENST00000266743 NLGN1Q8N2Q7 840 aa13.9□□□□□ -0.18
SYCP3-201ENST00000266743 DCAF5Q96JK2 942 aa13.9□□□□□ -0.18
SYCP3-201ENST00000266743 SLC4A9Q96Q91 983 aa13.9□□□□□ -0.18
SYCP3-201ENST00000266743 ATG3Q9NT62 314 aa13.9□□□□□ -0.18
SYCP3-201ENST00000266743 TMOD3Q9NYL9 352 aa13.9□□□□□ -0.18
SYCP3-201ENST00000266743 RTL1A6NKG5 1358 aa13.9□□□□□ -0.18
SYCP3-201ENST00000266743 DALRD3Q5D0E6 543 aaKnown RBP13.89□□□□□ -0.19
SYCP3-201ENST00000266743 PIM2Q9P1W9 311 aa13.89□□□□□ -0.19
SYCP3-201ENST00000266743 RTCBQ9Y3I0 505 aaKnown RBP13.89□□□□□ -0.19
SYCP3-201ENST00000266743 PARP3Q9Y6F1 533 aa13.89□□□□□ -0.19
SYCP3-201ENST00000266743 SMG6Q86US8 1419 aaKnown RBP13.89□□□□□ -0.19
SYCP3-201ENST00000266743 FYB1O15117 783 aa13.88□□□□□ -0.19
SYCP3-201ENST00000266743 NKX1-1Q15270 411 aaPredicted RBP13.88□□□□□ -0.19
SYCP3-201ENST00000266743 SRP68Q9UHB9 627 aaKnown RBP13.88□□□□□ -0.19
SYCP3-201ENST00000266743 MAP2P11137 1827 aaKnown RBP13.87□□□□□ -0.19
SYCP3-201ENST00000266743 INSRP06213 1382 aa13.86□□□□□ -0.19
SYCP3-201ENST00000266743 RFC4P35249 363 aa13.86□□□□□ -0.19
SYCP3-201ENST00000266743 DDR1Q08345 913 aa13.86□□□□□ -0.19
SYCP3-201ENST00000266743 MKRN1Q9UHC7 482 aaKnown RBP13.86□□□□□ -0.19
SYCP3-201ENST00000266743 EMILIN1Q9Y6C2 1016 aa13.86□□□□□ -0.19
SYCP3-201ENST00000266743 KIF13BQ9NQT8 1826 aa13.85□□□□□ -0.19
SYCP3-201ENST00000266743 FOXN1O15353 648 aa13.84□□□□□ -0.19
SYCP3-201ENST00000266743 SPG7Q9UQ90 795 aa13.84□□□□□ -0.19
SYCP3-201ENST00000266743 ITGB4P16144 1822 aa13.84□□□□□ -0.19
SYCP3-201ENST00000266743 PPM1GO15355 546 aaPredicted RBP13.83□□□□□ -0.2
SYCP3-201ENST00000266743 VEGFAP15692 232 aaPredicted RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms