RNA–Protein interactions for RNA: ENST00000265562.4

PTPN23-201, Transcript of protein tyrosine phosphatase, non-receptor type 23, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN23, Length 5,244 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN23-201ENST00000265562 PANK2Q9BZ23 570 aa16.35■□□□□ 0.21
PTPN23-201ENST00000265562 NCOA1Q15788 1441 aa16.35■□□□□ 0.21
PTPN23-201ENST00000265562 HMGXB3Q12766 1538 aa16.35■□□□□ 0.21
PTPN23-201ENST00000265562 GLRX3O76003 335 aaKnown RBP16.35■□□□□ 0.21
PTPN23-201ENST00000265562 TBC1D9Q6ZT07 1266 aa16.35■□□□□ 0.21
PTPN23-201ENST00000265562 GDPD2Q9HCC8 539 aa16.35■□□□□ 0.21
PTPN23-201ENST00000265562 KIF1BPQ96EK5 621 aa16.34■□□□□ 0.21
PTPN23-201ENST00000265562 ARHGAP5Q13017 1502 aa16.34■□□□□ 0.21
PTPN23-201ENST00000265562 DAPK1P53355 1430 aa16.34■□□□□ 0.21
PTPN23-201ENST00000265562 NUP133Q8WUM0 1156 aa16.34■□□□□ 0.21
PTPN23-201ENST00000265562 CDK19Q9BWU1 502 aa16.34■□□□□ 0.21
PTPN23-201ENST00000265562 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.34■□□□□ 0.211e-6■■■■■ 82.6
PTPN23-201ENST00000265562 TOP2BQ02880 1626 aa16.34■□□□□ 0.21
PTPN23-201ENST00000265562 NSD3Q9BZ95 1437 aa16.34■□□□□ 0.21
PTPN23-201ENST00000265562 ZSCAN25Q6NSZ9 544 aa16.34■□□□□ 0.21
PTPN23-201ENST00000265562 TAF4BQ92750 862 aa16.34■□□□□ 0.21
PTPN23-201ENST00000265562 RAB11FIP3O75154 756 aa16.34■□□□□ 0.21
PTPN23-201ENST00000265562 WASF1Q92558 559 aa16.34■□□□□ 0.21
PTPN23-201ENST00000265562 AFAP1Q8N556 730 aa16.33■□□□□ 0.21
PTPN23-201ENST00000265562 TIGD1Q96MW7 591 aa16.33■□□□□ 0.21
PTPN23-201ENST00000265562 ABCC11Q96J66 1382 aa16.33■□□□□ 0.2
PTPN23-201ENST00000265562 CNNM1Q9NRU3 951 aa16.33■□□□□ 0.2
PTPN23-201ENST00000265562 MRC2Q9UBG0 1479 aa16.33■□□□□ 0.2
PTPN23-201ENST00000265562 GPRASP1Q5JY77 1395 aa16.33■□□□□ 0.2
PTPN23-201ENST00000265562 CEP135Q66GS9 1140 aa16.32■□□□□ 0.2
PTPN23-201ENST00000265562 IFT140Q96RY7 1462 aa16.32■□□□□ 0.2
PTPN23-201ENST00000265562 TOPBP1Q92547 1522 aa16.32■□□□□ 0.2
PTPN23-201ENST00000265562 PRG4Q92954 1404 aaPredicted RBP16.32■□□□□ 0.2
PTPN23-201ENST00000265562 POTEB2H3BUK9 544 aa16.32■□□□□ 0.2
PTPN23-201ENST00000265562 KRT222Q8N1A0 295 aa16.32■□□□□ 0.2
PTPN23-201ENST00000265562 ZNF692Q9BU19 519 aaPredicted RBP16.32■□□□□ 0.2
PTPN23-201ENST00000265562 SNW1Q13573 536 aaKnown RBP16.32■□□□□ 0.2
PTPN23-201ENST00000265562 NOLC1Q14978 699 aaKnown RBP eCLIP16.32■□□□□ 0.2
PTPN23-201ENST00000265562 IMMTQ16891 758 aaKnown RBP16.32■□□□□ 0.2
PTPN23-201ENST00000265562 ABTB2Q8N961 1025 aa16.32■□□□□ 0.2
PTPN23-201ENST00000265562 CEP131Q9UPN4 1083 aa16.32■□□□□ 0.2
PTPN23-201ENST00000265562 UBE2HP62256 183 aa16.32■□□□□ 0.2
PTPN23-201ENST00000265562 TRIM27P14373 513 aa16.31■□□□□ 0.2
PTPN23-201ENST00000265562 FKBP4Q02790 459 aaKnown RBP eCLIP16.31■□□□□ 0.2
PTPN23-201ENST00000265562 CCDC57Q2TAC2 916 aa16.31■□□□□ 0.2
PTPN23-201ENST00000265562 ZNF397Q8NF99 534 aaPredicted RBP16.31■□□□□ 0.2
PTPN23-201ENST00000265562 NESP48681 1621 aa16.31■□□□□ 0.2
PTPN23-201ENST00000265562 STX6O43752 255 aa16.31■□□□□ 0.2
PTPN23-201ENST00000265562 SAMD1Q6SPF0 538 aaPredicted RBP16.31■□□□□ 0.2
PTPN23-201ENST00000265562 ZKSCAN5Q9Y2L8 839 aa16.31■□□□□ 0.2
PTPN23-201ENST00000265562 ANKRD18AQ8IVF6 992 aa16.3■□□□□ 0.2
PTPN23-201ENST00000265562 ZNF165P49910 485 aa16.3■□□□□ 0.2
PTPN23-201ENST00000265562 STX1AQ16623 288 aa16.3■□□□□ 0.2
PTPN23-201ENST00000265562 KIF6Q6ZMV9 814 aa16.3■□□□□ 0.2
PTPN23-201ENST00000265562 CAVIN2O95810 425 aa16.3■□□□□ 0.2
PTPN23-201ENST00000265562 SPA17Q15506 151 aa16.3■□□□□ 0.2
PTPN23-201ENST00000265562 HCLS1P14317 486 aaPredicted RBP16.3■□□□□ 0.2
PTPN23-201ENST00000265562 MICALCLQ6ZW33 695 aa16.3■□□□□ 0.2
PTPN23-201ENST00000265562 ANKRD62A6NC57 917 aa16.29■□□□□ 0.2
PTPN23-201ENST00000265562 SMARCC1Q92922 1105 aaPredicted RBP16.29■□□□□ 0.2
PTPN23-201ENST00000265562 IKQ13123 557 aaPredicted RBP16.29■□□□□ 0.2
PTPN23-201ENST00000265562 ZHX3Q9H4I2 956 aa16.29■□□□□ 0.2
PTPN23-201ENST00000265562 TMC6Q7Z403 805 aa16.29■□□□□ 0.2
PTPN23-201ENST00000265562 THUMPD2Q9BTF0 503 aaKnown RBP16.29■□□□□ 0.2
PTPN23-201ENST00000265562 ATAD2Q6PL18 1390 aa16.29■□□□□ 0.2
PTPN23-201ENST00000265562 LMAN1P49257 510 aa16.29■□□□□ 0.2
PTPN23-201ENST00000265562 U3KPZ7 1027 aaPredicted RBP16.29■□□□□ 0.2
PTPN23-201ENST00000265562 CCDC171Q6TFL3 1326 aa16.28■□□□□ 0.2
PTPN23-201ENST00000265562 GOLGA6L9A6NEM1 432 aa16.28■□□□□ 0.2
PTPN23-201ENST00000265562 UBAC1Q9BSL1 405 aa16.28■□□□□ 0.2
PTPN23-201ENST00000265562 GNL3LQ9NVN8 582 aaKnown RBP16.28■□□□□ 0.2
PTPN23-201ENST00000265562 TROQ12816 1431 aaPredicted RBP16.28■□□□□ 0.2
PTPN23-201ENST00000265562 GJB2P29033 226 aa16.28■□□□□ 0.2
PTPN23-201ENST00000265562 C8orf34Q49A92 452 aa16.27■□□□□ 0.2
PTPN23-201ENST00000265562 DDX54Q8TDD1 881 aaKnown RBP16.27■□□□□ 0.2
PTPN23-201ENST00000265562 ZNF830Q96NB3 372 aaPredicted RBP16.27■□□□□ 0.2
PTPN23-201ENST00000265562 FSIP1Q8NA03 581 aa16.27■□□□□ 0.2
PTPN23-201ENST00000265562 BMP2KQ9NSY1 1161 aaPredicted RBP16.27■□□□□ 0.2
PTPN23-201ENST00000265562 RAI14Q9P0K7 980 aa16.27■□□□□ 0.2
PTPN23-201ENST00000265562 SOGA3Q5TF21 947 aa16.27■□□□□ 0.19
PTPN23-201ENST00000265562 ZNF530Q6P9A1 599 aaPredicted RBP16.27■□□□□ 0.19
PTPN23-201ENST00000265562 C8orf76Q96K31 380 aa16.27■□□□□ 0.19
PTPN23-201ENST00000265562 HS1BP3Q53T59 392 aa16.27■□□□□ 0.19
PTPN23-201ENST00000265562 KLHL10Q6JEL2 608 aa16.26■□□□□ 0.19
PTPN23-201ENST00000265562 DYDC1Q8WWB3 177 aa16.26■□□□□ 0.19
PTPN23-201ENST00000265562 CEP126Q9P2H0 1117 aa16.26■□□□□ 0.19
PTPN23-201ENST00000265562 IBSPP21815 317 aaPredicted RBP16.26■□□□□ 0.19
PTPN23-201ENST00000265562 GTPBP4Q9BZE4 634 aaKnown RBP16.26■□□□□ 0.19
PTPN23-201ENST00000265562 TFIP11Q9UBB9 837 aaKnown RBP16.26■□□□□ 0.19
PTPN23-201ENST00000265562 RNF187Q5TA31 235 aaPredicted RBP16.26■□□□□ 0.19
PTPN23-201ENST00000265562 CCDC150Q8NCX0 1101 aa16.26■□□□□ 0.19
PTPN23-201ENST00000265562 HMGB1P09429 215 aaKnown RBP16.26■□□□□ 0.19
PTPN23-201ENST00000265562 RRS1Q15050 365 aaKnown RBP16.26■□□□□ 0.19
PTPN23-201ENST00000265562 GPATCH11Q8N954 259 aa16.26■□□□□ 0.19
PTPN23-201ENST00000265562 SUPT6HQ7KZ85 1726 aaKnown RBP16.26■□□□□ 0.19
PTPN23-201ENST00000265562 MAP2K1Q02750 393 aaPredicted RBP16.25■□□□□ 0.19
PTPN23-201ENST00000265562 CCDC94Q9BW85 323 aaPredicted RBP16.25■□□□□ 0.19
PTPN23-201ENST00000265562 TMX1Q9H3N1 280 aa16.25■□□□□ 0.19
PTPN23-201ENST00000265562 MYL6BP14649 208 aa16.25■□□□□ 0.19
PTPN23-201ENST00000265562 TTC22Q5TAA0 569 aa16.25■□□□□ 0.19
PTPN23-201ENST00000265562 GIMAP6Q6P9H5 292 aa16.25■□□□□ 0.19
PTPN23-201ENST00000265562 SNX21Q969T3 373 aa16.25■□□□□ 0.19
PTPN23-201ENST00000265562 FAM177BA6PVY3 158 aa16.24■□□□□ 0.19
PTPN23-201ENST00000265562 TDO2P48775 406 aa16.24■□□□□ 0.19
PTPN23-201ENST00000265562 SLC26A8Q96RN1 970 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms