RNA–Protein interactions for RNA: ENST00000265379.10

COL6A5-201, Transcript of collagen type VI alpha 5 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A5, Length 9,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-201ENST00000265379 CTNNA3Q9UI47 895 aa9.84□□□□□ -0.83
COL6A5-201ENST00000265379 CNKSR2Q8WXI2 1034 aa9.84□□□□□ -0.83
COL6A5-201ENST00000265379 ZNF771Q7L3S4 317 aaPredicted RBP9.84□□□□□ -0.83
COL6A5-201ENST00000265379 CCAR2Q8N163 923 aaKnown RBP9.84□□□□□ -0.83
COL6A5-201ENST00000265379 PATL2C9JE40 543 aaKnown RBP9.83□□□□□ -0.84
COL6A5-201ENST00000265379 CDR1P51861 262 aa9.83□□□□□ -0.84
COL6A5-201ENST00000265379 SPATA31D1Q6ZQQ2 1576 aa9.83□□□□□ -0.84
COL6A5-201ENST00000265379 C19orf44Q9H6X5 657 aa9.83□□□□□ -0.84
COL6A5-201ENST00000265379 ANKRD20A12PQ8NF67 263 aa9.83□□□□□ -0.84
COL6A5-201ENST00000265379 SART3Q15020 963 aaKnown RBP9.83□□□□□ -0.84
COL6A5-201ENST00000265379 PKNOX2Q96KN3 472 aa9.83□□□□□ -0.84
COL6A5-201ENST00000265379 TOMM22Q9NS69 142 aa9.83□□□□□ -0.84
COL6A5-201ENST00000265379 CCDC47Q96A33 483 aaKnown RBP9.83□□□□□ -0.84
COL6A5-201ENST00000265379 FAM184AQ8NB25 1140 aa9.83□□□□□ -0.84
COL6A5-201ENST00000265379 TECPR2O15040 1411 aa9.83□□□□□ -0.84
COL6A5-201ENST00000265379 SLC3A2P08195 630 aaKnown RBP9.82□□□□□ -0.84
COL6A5-201ENST00000265379 ERBB4Q15303 1308 aa9.82□□□□□ -0.84
COL6A5-201ENST00000265379 MROH2AA6NES4 1674 aa9.82□□□□□ -0.84
COL6A5-201ENST00000265379 A0A087WZG4 1122 aa9.82□□□□□ -0.84
COL6A5-201ENST00000265379 ANAPC15P60006 121 aa9.82□□□□□ -0.84
COL6A5-201ENST00000265379 TBC1D2BQ9UPU7 963 aa9.82□□□□□ -0.84
COL6A5-201ENST00000265379 TULP4Q9NRJ4 1543 aa9.82□□□□□ -0.84
COL6A5-201ENST00000265379 AKAP2Q9Y2D5 859 aa9.82□□□□□ -0.84
COL6A5-201ENST00000265379 ERCC6L2Q5T890 1561 aa9.82□□□□□ -0.84
COL6A5-201ENST00000265379 DIP2BQ9P265 1576 aa9.82□□□□□ -0.84
COL6A5-201ENST00000265379 CCDC66A2RUB6 948 aa9.82□□□□□ -0.84
COL6A5-201ENST00000265379 CHD1LQ86WJ1 897 aa9.82□□□□□ -0.84
COL6A5-201ENST00000265379 BECN2A8MW95 431 aa9.82□□□□□ -0.84
COL6A5-201ENST00000265379 CDKL5O76039 1030 aa9.82□□□□□ -0.84
COL6A5-201ENST00000265379 MAP3K5Q99683 1374 aa9.81□□□□□ -0.84
COL6A5-201ENST00000265379 XBP1P17861 261 aa9.81□□□□□ -0.84
COL6A5-201ENST00000265379 PIP4K2AP48426 406 aaPredicted RBP9.81□□□□□ -0.84
COL6A5-201ENST00000265379 TSPOAP1O95153 1857 aa9.81□□□□□ -0.84
COL6A5-201ENST00000265379 GLRX3O76003 335 aaKnown RBP9.81□□□□□ -0.84
COL6A5-201ENST00000265379 KIF1BPQ96EK5 621 aa9.81□□□□□ -0.84
COL6A5-201ENST00000265379 JMYQ8N9B5 988 aa9.81□□□□□ -0.84
COL6A5-201ENST00000265379 ZNF652Q9Y2D9 606 aa9.81□□□□□ -0.84
COL6A5-201ENST00000265379 SH2B1Q9NRF2 756 aaPredicted RBP9.81□□□□□ -0.84
COL6A5-201ENST00000265379 FYB1O15117 783 aa9.81□□□□□ -0.84
COL6A5-201ENST00000265379 DCTN1Q14203 1278 aa9.81□□□□□ -0.84
COL6A5-201ENST00000265379 GTF2E1P29083 439 aaPredicted RBP9.81□□□□□ -0.84
COL6A5-201ENST00000265379 NAT10Q9H0A0 1025 aaKnown RBP9.81□□□□□ -0.84
COL6A5-201ENST00000265379 STARD3NLO95772 234 aa9.8□□□□□ -0.84
COL6A5-201ENST00000265379 RIC3Q7Z5B4 369 aa9.8□□□□□ -0.84
COL6A5-201ENST00000265379 NCOA3Q9Y6Q9 1424 aa9.8□□□□□ -0.84
COL6A5-201ENST00000265379 CTDP1Q9Y5B0 961 aaPredicted RBP9.8□□□□□ -0.84
COL6A5-201ENST00000265379 KCNA6P17658 529 aa9.8□□□□□ -0.84
COL6A5-201ENST00000265379 PRDM11Q9NQV5 511 aa9.8□□□□□ -0.84
COL6A5-201ENST00000265379 VSIG10Q8N0Z9 540 aa9.8□□□□□ -0.84
COL6A5-201ENST00000265379 NOB1Q9ULX3 412 aaKnown RBP9.8□□□□□ -0.84
COL6A5-201ENST00000265379 FBXO3Q9UK99 471 aa9.8□□□□□ -0.84
COL6A5-201ENST00000265379 GOLGA4Q13439 2230 aaKnown RBP9.8□□□□□ -0.84
COL6A5-201ENST00000265379 CPSF1Q10570 1443 aaKnown RBP9.8□□□□□ -0.84
COL6A5-201ENST00000265379 ACEP12821 1306 aa9.8□□□□□ -0.84
COL6A5-201ENST00000265379 HMG20BQ9P0W2 317 aa9.8□□□□□ -0.84
COL6A5-201ENST00000265379 PPP4R3BQ5MIZ7 849 aa9.8□□□□□ -0.84
COL6A5-201ENST00000265379 GSE1Q14687 1217 aa9.79□□□□□ -0.84
COL6A5-201ENST00000265379 RAD50Q92878 1312 aa9.79□□□□□ -0.84
COL6A5-201ENST00000265379 AK7Q96M32 723 aa9.79□□□□□ -0.84
COL6A5-201ENST00000265379 TRIM34Q9BYJ4 488 aa9.79□□□□□ -0.84
COL6A5-201ENST00000265379 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.79□□□□□ -0.84
COL6A5-201ENST00000265379 CCDC9Q9Y3X0 531 aaKnown RBP9.79□□□□□ -0.84
COL6A5-201ENST00000265379 NT5C2P49902 561 aa9.79□□□□□ -0.84
COL6A5-201ENST00000265379 CAGE1Q8TC20 777 aa9.79□□□□□ -0.84
COL6A5-201ENST00000265379 BRMS1Q9HCU9 246 aa9.79□□□□□ -0.84
COL6A5-201ENST00000265379 HMOX1P09601 288 aa9.79□□□□□ -0.84
COL6A5-201ENST00000265379 HMGN5P82970 282 aaKnown RBP9.79□□□□□ -0.84
COL6A5-201ENST00000265379 TMED8Q6PL24 325 aaPredicted RBP9.79□□□□□ -0.84
COL6A5-201ENST00000265379 PCMTD1Q96MG8 357 aaPredicted RBP9.79□□□□□ -0.84
COL6A5-201ENST00000265379 RUFY1Q96T51 708 aa9.79□□□□□ -0.84
COL6A5-201ENST00000265379 ALKQ9UM73 1620 aa9.79□□□□□ -0.84
COL6A5-201ENST00000265379 WDR33Q9C0J8 1336 aaKnown RBP9.79□□□□□ -0.84
COL6A5-201ENST00000265379 SLC4A2P04920 1241 aa9.79□□□□□ -0.84
COL6A5-201ENST00000265379 TRIM29Q14134 588 aa9.79□□□□□ -0.84
COL6A5-201ENST00000265379 PANK1Q8TE04 598 aa9.79□□□□□ -0.84
COL6A5-201ENST00000265379 SAFBQ15424 915 aaKnown RBP eCLIP9.78□□□□□ -0.84
COL6A5-201ENST00000265379 TTC41PQ6P2S7 1318 aa9.78□□□□□ -0.84
COL6A5-201ENST00000265379 NACAP1Q9BZK3 213 aa9.78□□□□□ -0.84
COL6A5-201ENST00000265379 CCP110O43303 1012 aa9.78□□□□□ -0.84
COL6A5-201ENST00000265379 CERS3Q8IU89 383 aa9.78□□□□□ -0.84
COL6A5-201ENST00000265379 ACBD3Q9H3P7 528 aa9.78□□□□□ -0.84
COL6A5-201ENST00000265379 RIMBP3CA6NJZ7 1639 aa9.78□□□□□ -0.84
COL6A5-201ENST00000265379 RIMBP3BA6NNM3 1639 aa9.78□□□□□ -0.84
COL6A5-201ENST00000265379 RIMBP3Q9UFD9 1639 aa9.78□□□□□ -0.84
COL6A5-201ENST00000265379 SSH2Q76I76 1423 aa9.78□□□□□ -0.84
COL6A5-201ENST00000265379 RALYLQ86SE5 291 aaKnown RBP9.78□□□□□ -0.84
COL6A5-201ENST00000265379 LTV1Q96GA3 475 aaPredicted RBP9.78□□□□□ -0.84
COL6A5-201ENST00000265379 ERICH2A1L162 156 aa9.77□□□□□ -0.84
COL6A5-201ENST00000265379 WASF1Q92558 559 aa9.77□□□□□ -0.84
COL6A5-201ENST00000265379 FMNL2Q96PY5 1086 aa9.77□□□□□ -0.84
COL6A5-201ENST00000265379 CLTCQ00610 1675 aaKnown RBP9.77□□□□□ -0.85
COL6A5-201ENST00000265379 BTBD11A6QL63 1104 aa9.77□□□□□ -0.85
COL6A5-201ENST00000265379 MRE11P49959 708 aa9.77□□□□□ -0.85
COL6A5-201ENST00000265379 AKAP4Q5JQC9 854 aa9.77□□□□□ -0.85
COL6A5-201ENST00000265379 IFNL2Q8IZJ0 200 aa9.77□□□□□ -0.85
COL6A5-201ENST00000265379 ZRSR2Q15696 482 aaKnown RBP9.77□□□□□ -0.85
COL6A5-201ENST00000265379 ZNF287Q9HBT7 754 aa9.77□□□□□ -0.85
COL6A5-201ENST00000265379 SEPT11Q9NVA2 429 aaKnown RBP9.77□□□□□ -0.85
COL6A5-201ENST00000265379 RICTORQ6R327 1708 aa9.77□□□□□ -0.85
COL6A5-201ENST00000265379 CABP4P57796 275 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms