RNA–Protein interactions for RNA: ENST00000265245.9

LSG1-201, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSG1, Length 3,572 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-201ENST00000265245 ANKLE2Q86XL3 938 aa12.73□□□□□ -0.37
LSG1-201ENST00000265245 OTUD7AQ8TE49 926 aaPredicted RBP12.73□□□□□ -0.37
LSG1-201ENST00000265245 TAF7Q15545 349 aaPredicted RBP12.73□□□□□ -0.37
LSG1-201ENST00000265245 L1TD1Q5T7N2 865 aaKnown RBP12.72□□□□□ -0.37
LSG1-201ENST00000265245 PDIA4P13667 645 aaKnown RBP12.72□□□□□ -0.37
LSG1-201ENST00000265245 DDIT3P35638 169 aa12.72□□□□□ -0.37
LSG1-201ENST00000265245 SDSP20132 328 aa12.71□□□□□ -0.37
LSG1-201ENST00000265245 RABEP1Q15276 862 aa12.71□□□□□ -0.37
LSG1-201ENST00000265245 IL17REQ8NFR9 667 aa12.71□□□□□ -0.37
LSG1-201ENST00000265245 XIRP1Q702N8 1843 aaKnown RBP12.71□□□□□ -0.37
LSG1-201ENST00000265245 RGPD8O14715 1765 aaPredicted RBP12.71□□□□□ -0.37
LSG1-201ENST00000265245 NECTIN2Q92692 538 aa12.71□□□□□ -0.38
LSG1-201ENST00000265245 GBP4Q96PP9 640 aa12.71□□□□□ -0.38
LSG1-201ENST00000265245 NPHP4O75161 1426 aaPredicted RBP12.7□□□□□ -0.38
LSG1-201ENST00000265245 TRAK2O60296 914 aa12.7□□□□□ -0.38
LSG1-201ENST00000265245 RBM42Q9BTD8 480 aaKnown RBP12.7□□□□□ -0.38
LSG1-201ENST00000265245 REC8O95072 547 aa12.7□□□□□ -0.38
LSG1-201ENST00000265245 CD2BP2O95400 341 aaKnown RBP12.7□□□□□ -0.38
LSG1-201ENST00000265245 IP6K1Q92551 441 aa12.7□□□□□ -0.38
LSG1-201ENST00000265245 PSME1Q06323 249 aa12.69□□□□□ -0.38
LSG1-201ENST00000265245 USHBP1Q8N6Y0 703 aa12.69□□□□□ -0.38
LSG1-201ENST00000265245 USP26Q9BXU7 913 aa12.69□□□□□ -0.38
LSG1-201ENST00000265245 HDGFL1Q5TGJ6 251 aa12.69□□□□□ -0.38
LSG1-201ENST00000265245 KCNH5Q8NCM2 988 aa12.68□□□□□ -0.38
LSG1-201ENST00000265245 TNPO1Q92973 898 aaKnown RBP12.68□□□□□ -0.38
LSG1-201ENST00000265245 CHMP4AQ9BY43 222 aa12.68□□□□□ -0.38
LSG1-201ENST00000265245 OSBPL3Q9H4L5 887 aa12.68□□□□□ -0.38
LSG1-201ENST00000265245 EXOC6BQ9Y2D4 811 aa12.68□□□□□ -0.38
LSG1-201ENST00000265245 PDE1AP54750 535 aa12.68□□□□□ -0.38
LSG1-201ENST00000265245 RAB3GAP1Q15042 981 aa12.68□□□□□ -0.38
LSG1-201ENST00000265245 ESCO1Q5FWF5 840 aa12.68□□□□□ -0.38
LSG1-201ENST00000265245 ARID3AQ99856 593 aa12.68□□□□□ -0.38
LSG1-201ENST00000265245 LRRCC1Q9C099 1032 aa12.68□□□□□ -0.38
LSG1-201ENST00000265245 GZF1Q9H116 711 aaPredicted RBP12.68□□□□□ -0.38
LSG1-201ENST00000265245 FOXD4L1Q9NU39 408 aa12.68□□□□□ -0.38
LSG1-201ENST00000265245 GOLGA6L3A6NEY3 463 aa12.67□□□□□ -0.38
LSG1-201ENST00000265245 LRRC37A3O60309 1634 aa12.67□□□□□ -0.38
LSG1-201ENST00000265245 ZBTB7CA1YPR0 619 aa12.67□□□□□ -0.38
LSG1-201ENST00000265245 FGD1P98174 961 aa12.67□□□□□ -0.38
LSG1-201ENST00000265245 ERC2O15083 957 aa12.66□□□□□ -0.38
LSG1-201ENST00000265245 PTMSP20962 102 aa12.66□□□□□ -0.38
LSG1-201ENST00000265245 ATP8B2P98198 1209 aa12.66□□□□□ -0.38
LSG1-201ENST00000265245 PAXIP1Q6ZW49 1069 aaPredicted RBP12.66□□□□□ -0.38
LSG1-201ENST00000265245 RBM33Q96EV2 1170 aaKnown RBP12.66□□□□□ -0.38
LSG1-201ENST00000265245 UBTFL1P0CB47 393 aaPredicted RBP12.66□□□□□ -0.38
LSG1-201ENST00000265245 ST18O60284 1047 aa12.66□□□□□ -0.38
LSG1-201ENST00000265245 KLHL34Q8N239 644 aa12.66□□□□□ -0.38
LSG1-201ENST00000265245 NBPF6Q5VWK0 638 aa12.65□□□□□ -0.38
LSG1-201ENST00000265245 NBPF4Q96M43 638 aa12.65□□□□□ -0.38
LSG1-201ENST00000265245 LRRFIP2Q9Y608 721 aaKnown RBP12.65□□□□□ -0.38
LSG1-201ENST00000265245 USP54Q70EL1 1684 aa12.65□□□□□ -0.38
LSG1-201ENST00000265245 ADGRL3Q9HAR2 1447 aa12.65□□□□□ -0.38
LSG1-201ENST00000265245 PNMA6EA0A0J9YXQ4 647 aa12.65□□□□□ -0.38
LSG1-201ENST00000265245 MX1P20591 662 aa12.65□□□□□ -0.38
LSG1-201ENST00000265245 NAP1L5Q96NT1 182 aaPredicted RBP12.65□□□□□ -0.38
LSG1-201ENST00000265245 CEMIPQ8WUJ3 1361 aa12.65□□□□□ -0.38
LSG1-201ENST00000265245 GOLGA6L22H0YM25 854 aa12.64□□□□□ -0.39
LSG1-201ENST00000265245 TEFQ10587 303 aa12.64□□□□□ -0.39
LSG1-201ENST00000265245 PXDNLA1KZ92 1463 aa12.64□□□□□ -0.39
LSG1-201ENST00000265245 HOXB7P09629 217 aa12.64□□□□□ -0.39
LSG1-201ENST00000265245 IBTKQ9P2D0 1353 aaPredicted RBP12.64□□□□□ -0.39
LSG1-201ENST00000265245 EIF2S2P20042 333 aaKnown RBP12.64□□□□□ -0.39
LSG1-201ENST00000265245 SKOR2Q2VWA4 1001 aaPredicted RBP12.64□□□□□ -0.39
LSG1-201ENST00000265245 USP44Q9H0E7 712 aa12.64□□□□□ -0.39
LSG1-201ENST00000265245 SRCIN1Q9C0H9 1055 aa12.63□□□□□ -0.39
LSG1-201ENST00000265245 MARF1Q9Y4F3 1742 aaKnown RBP12.63□□□□□ -0.39
LSG1-201ENST00000265245 PLEKHO1Q53GL0 409 aaPredicted RBP12.63□□□□□ -0.39
LSG1-201ENST00000265245 ZNF530Q6P9A1 599 aaPredicted RBP12.63□□□□□ -0.39
LSG1-201ENST00000265245 FSD2A1L4K1 749 aa12.63□□□□□ -0.39
LSG1-201ENST00000265245 EIF4A1P60842 406 aaKnown RBP12.63□□□□□ -0.39
LSG1-201ENST00000265245 PHAXQ9H814 394 aaKnown RBP12.63□□□□□ -0.39
LSG1-201ENST00000265245 FAM208AQ9UK61 1670 aaKnown RBP12.62□□□□□ -0.39
LSG1-201ENST00000265245 NFAT5O94916 1531 aa12.62□□□□□ -0.39
LSG1-201ENST00000265245 AMOTQ4VCS5 1084 aa12.62□□□□□ -0.39
LSG1-201ENST00000265245 AKAP4Q5JQC9 854 aa12.62□□□□□ -0.39
LSG1-201ENST00000265245 LGR6Q9HBX8 967 aa12.62□□□□□ -0.39
LSG1-201ENST00000265245 SALL3Q9BXA9 1300 aa12.62□□□□□ -0.39
LSG1-201ENST00000265245 NUCB2P80303 420 aa12.61□□□□□ -0.39
LSG1-201ENST00000265245 TSHZ3Q63HK5 1081 aa12.61□□□□□ -0.39
LSG1-201ENST00000265245 ISY1Q9ULR0 285 aaKnown RBP12.61□□□□□ -0.39
LSG1-201ENST00000265245 TRIM6-TRIM34B2RNG4 842 aa12.61□□□□□ -0.39
LSG1-201ENST00000265245 GCP02774 474 aa12.61□□□□□ -0.39
LSG1-201ENST00000265245 MCCP23508 829 aa12.61□□□□□ -0.39
LSG1-201ENST00000265245 SSFA2P28290 1259 aa12.61□□□□□ -0.39
LSG1-201ENST00000265245 C1orf141Q5JVX7 400 aa12.61□□□□□ -0.39
LSG1-201ENST00000265245 LMOD2Q6P5Q4 547 aa12.61□□□□□ -0.39
LSG1-201ENST00000265245 BTBD11A6QL63 1104 aa12.6□□□□□ -0.39
LSG1-201ENST00000265245 SSH3Q8TE77 659 aa12.6□□□□□ -0.39
LSG1-201ENST00000265245 RILPL2Q969X0 211 aa12.6□□□□□ -0.39
LSG1-201ENST00000265245 LRRC59Q96AG4 307 aaKnown RBP12.6□□□□□ -0.39
LSG1-201ENST00000265245 CWC22Q9HCG8 908 aaKnown RBP12.6□□□□□ -0.39
LSG1-201ENST00000265245 STAP2Q9UGK3 403 aa12.6□□□□□ -0.39
LSG1-201ENST00000265245 LTBP4Q8N2S1 1624 aa12.6□□□□□ -0.39
LSG1-201ENST00000265245 HSP90AA2PQ14568 343 aaPredicted RBP12.6□□□□□ -0.39
LSG1-201ENST00000265245 CHPF2Q9P2E5 772 aa12.6□□□□□ -0.39
LSG1-201ENST00000265245 RAB11FIP3O75154 756 aa12.6□□□□□ -0.39
LSG1-201ENST00000265245 XRCC6P12956 609 aaKnown RBP eCLIP12.6□□□□□ -0.39
LSG1-201ENST00000265245 MRE11P49959 708 aa12.6□□□□□ -0.39
LSG1-201ENST00000265245 DNAAF4Q8WXU2 420 aa12.6□□□□□ -0.39
LSG1-201ENST00000265245 ESYT1Q9BSJ8 1104 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms