RNA–Protein interactions for RNA: ENST00000265085.9

CPEB4-201, Transcript of cytoplasmic polyadenylation element binding protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPEB4, Length 9,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB4-201ENST00000265085 HDXQ7Z353 690 aa9.54□□□□□ -0.88
CPEB4-201ENST00000265085 DNAJC8O75937 253 aaPredicted RBP9.54□□□□□ -0.88
CPEB4-201ENST00000265085 TUBBP07437 444 aa9.54□□□□□ -0.88
CPEB4-201ENST00000265085 RAB3GAP2Q9H2M9 1393 aa9.53□□□□□ -0.88
CPEB4-201ENST00000265085 WDR33Q9C0J8 1336 aaKnown RBP9.53□□□□□ -0.88
CPEB4-201ENST00000265085 CCDC152Q4G0S7 254 aa9.53□□□□□ -0.88
CPEB4-201ENST00000265085 CFAP45Q9UL16 551 aa9.53□□□□□ -0.88
CPEB4-201ENST00000265085 PPP1R1BQ9UD71 204 aaPredicted RBP9.53□□□□□ -0.88
CPEB4-201ENST00000265085 TRIM29Q14134 588 aa9.53□□□□□ -0.88
CPEB4-201ENST00000265085 MAFGO15525 162 aa9.53□□□□□ -0.88
CPEB4-201ENST00000265085 NUCB1Q02818 461 aa9.53□□□□□ -0.88
CPEB4-201ENST00000265085 PDCD7Q8N8D1 485 aaKnown RBP9.53□□□□□ -0.88
CPEB4-201ENST00000265085 ETAA1Q9NY74 926 aa9.53□□□□□ -0.88
CPEB4-201ENST00000265085 TSNAXIP1Q2TAA8 658 aa9.53□□□□□ -0.88
CPEB4-201ENST00000265085 UBA5Q9GZZ9 404 aa9.53□□□□□ -0.88
CPEB4-201ENST00000265085 H3BQV1 296 aa9.52□□□□□ -0.88
CPEB4-201ENST00000265085 HNRNPH2P55795 449 aaKnown RBP9.52□□□□□ -0.88
CPEB4-201ENST00000265085 CCDC27Q2M243 656 aa9.52□□□□□ -0.88
CPEB4-201ENST00000265085 CCDC40Q4G0X9 1142 aa9.52□□□□□ -0.88
CPEB4-201ENST00000265085 IFFO2Q5TF58 517 aa9.52□□□□□ -0.88
CPEB4-201ENST00000265085 HDGFL1Q5TGJ6 251 aa9.52□□□□□ -0.88
CPEB4-201ENST00000265085 MTUS2Q5JR59 1369 aa9.52□□□□□ -0.88
CPEB4-201ENST00000265085 OAS2P29728 719 aaKnown RBP9.52□□□□□ -0.88
CPEB4-201ENST00000265085 TEX11Q8IYF3 940 aa9.52□□□□□ -0.88
CPEB4-201ENST00000265085 TBC1D31Q96DN5 1066 aa9.52□□□□□ -0.89
CPEB4-201ENST00000265085 SETDB1Q15047 1291 aa9.52□□□□□ -0.89
CPEB4-201ENST00000265085 FAM212AQ96EL1 285 aa9.52□□□□□ -0.89
CPEB4-201ENST00000265085 TNMDQ9H2S6 317 aa9.52□□□□□ -0.89
CPEB4-201ENST00000265085 CBFA2T2O43439 604 aa9.52□□□□□ -0.89
CPEB4-201ENST00000265085 CCAR1Q8IX12 1150 aaKnown RBP9.52□□□□□ -0.89
CPEB4-201ENST00000265085 JMYQ8N9B5 988 aa9.52□□□□□ -0.89
CPEB4-201ENST00000265085 TTC14Q96N46 770 aa9.52□□□□□ -0.89
CPEB4-201ENST00000265085 PRPF4BQ13523 1007 aaKnown RBP9.52□□□□□ -0.89
CPEB4-201ENST00000265085 VPS8Q8N3P4 1428 aa9.52□□□□□ -0.89
CPEB4-201ENST00000265085 RNF8O76064 485 aa9.52□□□□□ -0.89
CPEB4-201ENST00000265085 FAM76AQ8TAV0 307 aa9.52□□□□□ -0.89
CPEB4-201ENST00000265085 CARD11Q9BXL7 1154 aa9.52□□□□□ -0.89
CPEB4-201ENST00000265085 ELP1O95163 1332 aa9.52□□□□□ -0.89
CPEB4-201ENST00000265085 AFAP1L1Q8TED9 768 aa9.52□□□□□ -0.89
CPEB4-201ENST00000265085 SMARCE1Q969G3 411 aa9.52□□□□□ -0.89
CPEB4-201ENST00000265085 TAOK3Q9H2K8 898 aa9.52□□□□□ -0.89
CPEB4-201ENST00000265085 URI1O94763 535 aaPredicted RBP9.51□□□□□ -0.89
CPEB4-201ENST00000265085 GNL3LQ9NVN8 582 aaKnown RBP9.51□□□□□ -0.89
CPEB4-201ENST00000265085 INTS3Q68E01 1043 aaKnown RBP9.51□□□□□ -0.89
CPEB4-201ENST00000265085 NBPF7P0C2Y1 421 aaPredicted RBP9.51□□□□□ -0.89
CPEB4-201ENST00000265085 SNCBQ16143 134 aa9.51□□□□□ -0.89
CPEB4-201ENST00000265085 ATP2B3Q16720 1220 aa9.51□□□□□ -0.89
CPEB4-201ENST00000265085 TBC1D22AQ8WUA7 517 aa9.51□□□□□ -0.89
CPEB4-201ENST00000265085 DYNC1I2Q13409 638 aaKnown RBP9.51□□□□□ -0.89
CPEB4-201ENST00000265085 MSL3Q8N5Y2 521 aaKnown RBP9.51□□□□□ -0.89
CPEB4-201ENST00000265085 PDILTQ8N807 584 aa9.51□□□□□ -0.89
CPEB4-201ENST00000265085 KINO60870 393 aaKnown RBP9.51□□□□□ -0.89
CPEB4-201ENST00000265085 CDC45O75419 566 aa9.51□□□□□ -0.89
CPEB4-201ENST00000265085 PSMC4P43686 418 aa9.51□□□□□ -0.89
CPEB4-201ENST00000265085 MXRA7P84157 204 aa9.51□□□□□ -0.89
CPEB4-201ENST00000265085 SF3A1Q15459 793 aaKnown RBP9.51□□□□□ -0.89
CPEB4-201ENST00000265085 CEP57L1Q8IYX8 460 aa9.51□□□□□ -0.89
CPEB4-201ENST00000265085 MPHOSPH6Q99547 160 aaKnown RBP9.51□□□□□ -0.89
CPEB4-201ENST00000265085 CHRM1P11229 460 aaPredicted RBP9.51□□□□□ -0.89
CPEB4-201ENST00000265085 NEUROD2Q15784 382 aa9.51□□□□□ -0.89
CPEB4-201ENST00000265085 TPX2Q9ULW0 747 aaKnown RBP9.5□□□□□ -0.89
CPEB4-201ENST00000265085 RNF217Q8TC41 542 aa9.5□□□□□ -0.89
CPEB4-201ENST00000265085 VCX3BQ9H321 246 aa9.5□□□□□ -0.89
CPEB4-201ENST00000265085 VCX3AQ9NNX9 186 aa9.5□□□□□ -0.89
CPEB4-201ENST00000265085 MMP14P50281 582 aa9.5□□□□□ -0.89
CPEB4-201ENST00000265085 PCK1P35558 622 aa9.5□□□□□ -0.89
CPEB4-201ENST00000265085 MAP3K11Q16584 847 aa9.5□□□□□ -0.89
CPEB4-201ENST00000265085 RABEP2Q9H5N1 569 aa9.5□□□□□ -0.89
CPEB4-201ENST00000265085 TTC12Q9H892 705 aaPredicted RBP9.5□□□□□ -0.89
CPEB4-201ENST00000265085 PPFIA3O75145 1194 aa9.5□□□□□ -0.89
CPEB4-201ENST00000265085 PDRG1Q9NUG6 133 aa9.5□□□□□ -0.89
CPEB4-201ENST00000265085 CAPN7Q9Y6W3 813 aa9.5□□□□□ -0.89
CPEB4-201ENST00000265085 LRRD1A4D1F6 860 aa9.5□□□□□ -0.89
CPEB4-201ENST00000265085 SRGAP3O43295 1099 aa9.5□□□□□ -0.89
CPEB4-201ENST00000265085 GCFC2P16383 781 aaKnown RBP9.5□□□□□ -0.89
CPEB4-201ENST00000265085 ACTN2P35609 894 aa9.5□□□□□ -0.89
CPEB4-201ENST00000265085 KLHL23Q8NBE8 558 aa9.5□□□□□ -0.89
CPEB4-201ENST00000265085 CCDC148Q8NFR7 591 aa9.5□□□□□ -0.89
CPEB4-201ENST00000265085 FRMD3A2A2Y4 597 aa9.49□□□□□ -0.89
CPEB4-201ENST00000265085 CC2D2BQ6DHV5 1058 aa9.49□□□□□ -0.89
CPEB4-201ENST00000265085 SMC3Q9UQE7 1217 aa9.49□□□□□ -0.89
CPEB4-201ENST00000265085 ELF2Q15723 593 aa9.49□□□□□ -0.89
CPEB4-201ENST00000265085 EXOC4Q96A65 974 aa9.49□□□□□ -0.89
CPEB4-201ENST00000265085 TSC22D3Q99576 134 aa9.49□□□□□ -0.89
CPEB4-201ENST00000265085 ACBD5Q5T8D3 534 aaPredicted RBP9.49□□□□□ -0.89
CPEB4-201ENST00000265085 TADA2BQ86TJ2 420 aa9.49□□□□□ -0.89
CPEB4-201ENST00000265085 ITFG2Q969R8 447 aa9.49□□□□□ -0.89
CPEB4-201ENST00000265085 VPS37CA5D8V6 355 aaPredicted RBP9.49□□□□□ -0.89
CPEB4-201ENST00000265085 FAM177A1Q8N128 213 aaPredicted RBP9.49□□□□□ -0.89
CPEB4-201ENST00000265085 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.49□□□□□ -0.89
CPEB4-201ENST00000265085 CCDC57Q2TAC2 916 aa9.49□□□□□ -0.89
CPEB4-201ENST00000265085 GOLGA1Q92805 767 aa9.49□□□□□ -0.89
CPEB4-201ENST00000265085 PRPHP41219 470 aa9.49□□□□□ -0.89
CPEB4-201ENST00000265085 CCDC30Q5VVM6 783 aa9.49□□□□□ -0.89
CPEB4-201ENST00000265085 FAM114A2Q9NRY5 505 aa9.49□□□□□ -0.89
CPEB4-201ENST00000265085 CCDC7Q96M83 1385 aa9.49□□□□□ -0.89
CPEB4-201ENST00000265085 FIBPO43427 364 aa9.49□□□□□ -0.89
CPEB4-201ENST00000265085 CAND2O75155 1236 aa9.49□□□□□ -0.89
CPEB4-201ENST00000265085 IFFO1Q0D2I5 559 aa9.48□□□□□ -0.89
CPEB4-201ENST00000265085 CDK5RAP3Q96JB5 506 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms