RNA–Protein interactions for RNA: ENST00000264951.8

XRN1-201, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene XRN1, Length 10,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-201ENST00000264951 VCX3BQ9H321 246 aa6.32□□□□□ -1.4
XRN1-201ENST00000264951 BMP15O95972 392 aa6.32□□□□□ -1.4
XRN1-201ENST00000264951 LARP1Q6PKG0 1096 aaKnown RBP6.32□□□□□ -1.4
XRN1-201ENST00000264951 BLOC1S2Q6QNY1 142 aa6.32□□□□□ -1.4
XRN1-201ENST00000264951 SLU7O95391 586 aaKnown RBP6.32□□□□□ -1.4
XRN1-201ENST00000264951 RBM10P98175 930 aaKnown RBP6.32□□□□□ -1.4
XRN1-201ENST00000264951 POTEDQ86YR6 584 aa6.32□□□□□ -1.4
XRN1-201ENST00000264951 PANK3Q9H999 370 aa6.32□□□□□ -1.4
XRN1-201ENST00000264951 STK26Q9P289 416 aa6.32□□□□□ -1.4
XRN1-201ENST00000264951 HSF2BPO75031 334 aa6.32□□□□□ -1.4
XRN1-201ENST00000264951 SLC4A3P48751 1232 aa6.32□□□□□ -1.4
XRN1-201ENST00000264951 RBM25P49756 843 aaKnown RBP6.32□□□□□ -1.4
XRN1-201ENST00000264951 RIPK4P57078 832 aa6.32□□□□□ -1.4
XRN1-201ENST00000264951 SPC24Q8NBT2 197 aa6.32□□□□□ -1.4
XRN1-201ENST00000264951 CTAGE1Q96RT6 745 aa6.32□□□□□ -1.4
XRN1-201ENST00000264951 IQCGQ9H095 443 aaKnown RBP6.32□□□□□ -1.4
XRN1-201ENST00000264951 GNAI2P04899 355 aa6.32□□□□□ -1.4
XRN1-201ENST00000264951 PIP4K2BP78356 416 aa6.32□□□□□ -1.4
XRN1-201ENST00000264951 CCDC14Q49A88 953 aa6.32□□□□□ -1.4
XRN1-201ENST00000264951 LNPKQ9C0E8 428 aa6.32□□□□□ -1.4
XRN1-201ENST00000264951 CCDC38Q502W7 563 aa6.31□□□□□ -1.4
XRN1-201ENST00000264951 BACH2Q9BYV9 841 aa6.31□□□□□ -1.4
XRN1-201ENST00000264951 SARNPP82979 210 aaKnown RBP6.31□□□□□ -1.4
XRN1-201ENST00000264951 PPP4R3AQ6IN85 833 aa6.31□□□□□ -1.4
XRN1-201ENST00000264951 CACNA2D3Q8IZS8 1091 aa6.31□□□□□ -1.4
XRN1-201ENST00000264951 CEP135Q66GS9 1140 aa6.31□□□□□ -1.4
XRN1-201ENST00000264951 LMNTD2Q8IXW0 634 aa6.31□□□□□ -1.4
XRN1-201ENST00000264951 NDC80O14777 642 aa6.31□□□□□ -1.4
XRN1-201ENST00000264951 MAP7Q14244 749 aa6.31□□□□□ -1.4
XRN1-201ENST00000264951 PIBF1Q8WXW3 757 aa6.31□□□□□ -1.4
XRN1-201ENST00000264951 ATAD2Q6PL18 1390 aa6.31□□□□□ -1.4
XRN1-201ENST00000264951 AMPD3Q01432 767 aa6.31□□□□□ -1.4
XRN1-201ENST00000264951 GBP6Q6ZN66 633 aa6.31□□□□□ -1.4
XRN1-201ENST00000264951 CCDC121Q6ZUS5 278 aa6.31□□□□□ -1.4
XRN1-201ENST00000264951 CCDC69A6NI79 296 aa6.31□□□□□ -1.4
XRN1-201ENST00000264951 PPFIA3O75145 1194 aa6.31□□□□□ -1.4
XRN1-201ENST00000264951 VIMP08670 466 aaKnown RBP6.31□□□□□ -1.4
XRN1-201ENST00000264951 LACTBP83111 547 aaPredicted RBP6.31□□□□□ -1.4
XRN1-201ENST00000264951 IPO4Q8TEX9 1081 aaKnown RBP6.31□□□□□ -1.4
XRN1-201ENST00000264951 CCDC97Q96F63 343 aaPredicted RBP6.31□□□□□ -1.4
XRN1-201ENST00000264951 BCAP29Q9UHQ4 241 aa6.31□□□□□ -1.4
XRN1-201ENST00000264951 BRPF3Q9ULD4 1205 aa6.31□□□□□ -1.4
XRN1-201ENST00000264951 SSX2IPQ9Y2D8 614 aa6.31□□□□□ -1.4
XRN1-201ENST00000264951 PPFIA2O75334 1257 aa6.31□□□□□ -1.4
XRN1-201ENST00000264951 CACNA2D4Q7Z3S7 1137 aa6.31□□□□□ -1.4
XRN1-201ENST00000264951 TCHPQ9BT92 498 aa6.31□□□□□ -1.4
XRN1-201ENST00000264951 RAD21O60216 631 aa6.31□□□□□ -1.4
XRN1-201ENST00000264951 SAFB2Q14151 953 aaKnown RBP eCLIP6.31□□□□□ -1.4
XRN1-201ENST00000264951 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.31□□□□□ -1.45e-8■□□□□ 9.8
XRN1-201ENST00000264951 SKIDA1Q1XH10 827 aa6.3□□□□□ -1.4
XRN1-201ENST00000264951 VCXQ9H320 206 aa6.3□□□□□ -1.4
XRN1-201ENST00000264951 ATP5DP30049 168 aa6.3□□□□□ -1.4
XRN1-201ENST00000264951 SETDB1Q15047 1291 aa6.3□□□□□ -1.4
XRN1-201ENST00000264951 ARHGAP24Q8N264 748 aa6.3□□□□□ -1.4
XRN1-201ENST00000264951 GPATCH11Q8N954 259 aa6.3□□□□□ -1.4
XRN1-201ENST00000264951 AKAP2Q9Y2D5 859 aa6.3□□□□□ -1.4
XRN1-201ENST00000264951 TSNAXIP1Q2TAA8 658 aa6.3□□□□□ -1.4
XRN1-201ENST00000264951 CCDC174Q6PII3 467 aa6.3□□□□□ -1.4
XRN1-201ENST00000264951 PPP1R14CQ8TAE6 165 aa6.3□□□□□ -1.4
XRN1-201ENST00000264951 U3KPZ7 1027 aaPredicted RBP6.3□□□□□ -1.4
XRN1-201ENST00000264951 GIGYF1O75420 1035 aaPredicted RBP6.3□□□□□ -1.4
XRN1-201ENST00000264951 TRAF1Q13077 416 aa6.3□□□□□ -1.4
XRN1-201ENST00000264951 CLUL1Q15846 466 aa6.3□□□□□ -1.4
XRN1-201ENST00000264951 ERCC6LQ2NKX8 1250 aa6.3□□□□□ -1.4
XRN1-201ENST00000264951 NUTM1Q86Y26 1132 aa6.3□□□□□ -1.4
XRN1-201ENST00000264951 APAF1O14727 1248 aa6.3□□□□□ -1.4
XRN1-201ENST00000264951 STX1AQ16623 288 aa6.3□□□□□ -1.4
XRN1-201ENST00000264951 LMBR1Q8WVP7 490 aa6.3□□□□□ -1.4
XRN1-201ENST00000264951 BICRAQ9NZM4 1560 aa6.3□□□□□ -1.4
XRN1-201ENST00000264951 IKQ13123 557 aaPredicted RBP6.3□□□□□ -1.4
XRN1-201ENST00000264951 MVPQ14764 893 aaKnown RBP6.3□□□□□ -1.4
XRN1-201ENST00000264951 KIAA0753Q2KHM9 967 aa6.3□□□□□ -1.4
XRN1-201ENST00000264951 RASSF4Q9H2L5 321 aa6.3□□□□□ -1.4
XRN1-201ENST00000264951 CUX1P39880 1505 aa6.3□□□□□ -1.4
XRN1-201ENST00000264951 TTC31Q49AM3 519 aaPredicted RBP6.3□□□□□ -1.4
XRN1-201ENST00000264951 DHX37Q8IY37 1157 aaKnown RBP6.3□□□□□ -1.4
XRN1-201ENST00000264951 RPGRIP1LQ68CZ1 1315 aa6.3□□□□□ -1.4
XRN1-201ENST00000264951 CUX2O14529 1486 aa6.3□□□□□ -1.4
XRN1-201ENST00000264951 ST20-MTHFSA0A0A6YYL1 179 aa6.3□□□□□ -1.4
XRN1-201ENST00000264951 TNNT1P13805 278 aa6.3□□□□□ -1.4
XRN1-201ENST00000264951 IRX4P78413 519 aa6.3□□□□□ -1.4
XRN1-201ENST00000264951 SEPT14Q6ZU15 432 aa6.3□□□□□ -1.4
XRN1-201ENST00000264951 CCDC12Q8WUD4 166 aaPredicted RBP6.3□□□□□ -1.4
XRN1-201ENST00000264951 RAB3IPQ96QF0 476 aaPredicted RBP6.3□□□□□ -1.4
XRN1-201ENST00000264951 SELENOOQ9BVL4 669 aa6.3□□□□□ -1.4
XRN1-201ENST00000264951 BCL2L13Q9BXK5 485 aa6.3□□□□□ -1.4
XRN1-201ENST00000264951 CCDC113Q9H0I3 377 aa6.3□□□□□ -1.4
XRN1-201ENST00000264951 HDAC9Q9UKV0 1011 aa6.3□□□□□ -1.4
XRN1-201ENST00000264951 CASQ2O14958 399 aaPredicted RBP6.29□□□□□ -1.4
XRN1-201ENST00000264951 ARHGAP25P42331 645 aa6.29□□□□□ -1.4
XRN1-201ENST00000264951 TMEM266Q2M3C6 531 aa6.29□□□□□ -1.4
XRN1-201ENST00000264951 URI1O94763 535 aaPredicted RBP6.29□□□□□ -1.4
XRN1-201ENST00000264951 CLCN1P35523 988 aa6.29□□□□□ -1.4
XRN1-201ENST00000264951 LMAN1P49257 510 aa6.29□□□□□ -1.4
XRN1-201ENST00000264951 SPATS2Q86XZ4 545 aaKnown RBP6.29□□□□□ -1.4
XRN1-201ENST00000264951 RPAP2Q8IXW5 612 aaPredicted RBP6.29□□□□□ -1.4
XRN1-201ENST00000264951 FBXW7Q969H0 707 aa6.29□□□□□ -1.4
XRN1-201ENST00000264951 EHMT1Q9H9B1 1298 aa6.29□□□□□ -1.4
XRN1-201ENST00000264951 VCX3AQ9NNX9 186 aa6.29□□□□□ -1.4
XRN1-201ENST00000264951 A0A1B0GUL7 405 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms