RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 ZSCAN30Q86W11 494 aa21.07■□□□□ 0.96
COL5A3-201ENST00000264828 ANKLE2Q86XL3 938 aa21.06■□□□□ 0.96
COL5A3-201ENST00000264828 RAI14Q9P0K7 980 aa21.06■□□□□ 0.96
COL5A3-201ENST00000264828 EXOC6BQ9Y2D4 811 aa21.06■□□□□ 0.96
COL5A3-201ENST00000264828 TOM1L2Q6ZVM7 507 aa21.06■□□□□ 0.96
COL5A3-201ENST00000264828 TMCO3Q6UWJ1 677 aa21.06■□□□□ 0.96
COL5A3-201ENST00000264828 USP5P45974 858 aa21.06■□□□□ 0.96
COL5A3-201ENST00000264828 BTBD11A6QL63 1104 aa21.06■□□□□ 0.96
COL5A3-201ENST00000264828 BMP2KQ9NSY1 1161 aaPredicted RBP21.06■□□□□ 0.96
COL5A3-201ENST00000264828 PPP1R1BQ9UD71 204 aaPredicted RBP21.05■□□□□ 0.96
COL5A3-201ENST00000264828 CASQ1P31415 396 aa21.05■□□□□ 0.96
COL5A3-201ENST00000264828 MIS18AQ9NYP9 233 aa21.05■□□□□ 0.96
COL5A3-201ENST00000264828 PTPN14Q15678 1187 aa21.04■□□□□ 0.96
COL5A3-201ENST00000264828 JAKMIP3Q5VZ66 844 aa21.04■□□□□ 0.96
COL5A3-201ENST00000264828 CTNNA3Q9UI47 895 aa21.04■□□□□ 0.96
COL5A3-201ENST00000264828 IDH1O75874 414 aaKnown RBP21.04■□□□□ 0.96
COL5A3-201ENST00000264828 EZRP15311 586 aaKnown RBP21.04■□□□□ 0.96
COL5A3-201ENST00000264828 ZNF76P36508 570 aa21.04■□□□□ 0.96
COL5A3-201ENST00000264828 SLC26A8Q96RN1 970 aa21.04■□□□□ 0.96
COL5A3-201ENST00000264828 CCDC113Q9H0I3 377 aa21.04■□□□□ 0.96
COL5A3-201ENST00000264828 SPG7Q9UQ90 795 aa21.04■□□□□ 0.96
COL5A3-201ENST00000264828 PRPF40BQ6NWY9 871 aaKnown RBP21.04■□□□□ 0.96
COL5A3-201ENST00000264828 XPCQ01831 940 aaPredicted RBP21.03■□□□□ 0.96
COL5A3-201ENST00000264828 KLHL10Q6JEL2 608 aa21.03■□□□□ 0.96
COL5A3-201ENST00000264828 KRT32Q14532 448 aa21.03■□□□□ 0.96
COL5A3-201ENST00000264828 FAM135AQ9P2D6 1515 aa21.03■□□□□ 0.96
COL5A3-201ENST00000264828 CRACR2AQ9BSW2 395 aa21.03■□□□□ 0.96
COL5A3-201ENST00000264828 WDR97A6NE52 1622 aa21.03■□□□□ 0.96
COL5A3-201ENST00000264828 USP8P40818 1118 aa21.02■□□□□ 0.96
COL5A3-201ENST00000264828 IMMTQ16891 758 aaKnown RBP21.02■□□□□ 0.96
COL5A3-201ENST00000264828 ZSCAN29Q8IWY8 852 aaPredicted RBP21.02■□□□□ 0.96
COL5A3-201ENST00000264828 ZNF397Q8NF99 534 aaPredicted RBP21.02■□□□□ 0.96
COL5A3-201ENST00000264828 LRP2BPQ9P2M1 347 aa21.02■□□□□ 0.96
COL5A3-201ENST00000264828 GUCY1B3Q02153 619 aa21.02■□□□□ 0.95
COL5A3-201ENST00000264828 DNA2P51530 1060 aa21.01■□□□□ 0.95
COL5A3-201ENST00000264828 SFPQP23246 707 aaKnown RBP eCLIP21.01■□□□□ 0.95
COL5A3-201ENST00000264828 WASF1Q92558 559 aa21.01■□□□□ 0.95
COL5A3-201ENST00000264828 URI1O94763 535 aaPredicted RBP21.01■□□□□ 0.95
COL5A3-201ENST00000264828 CEP126Q9P2H0 1117 aa21.01■□□□□ 0.95
COL5A3-201ENST00000264828 CCDC183Q5T5S1 534 aa21■□□□□ 0.95
COL5A3-201ENST00000264828 NSD3Q9BZ95 1437 aa21■□□□□ 0.95
COL5A3-201ENST00000264828 AIDAQ96BJ3 306 aa21■□□□□ 0.95
COL5A3-201ENST00000264828 CEP131Q9UPN4 1083 aa21■□□□□ 0.95
COL5A3-201ENST00000264828 ANKRD30BQ9BXX2 1392 aa21■□□□□ 0.95
COL5A3-201ENST00000264828 DYDC1Q8WWB3 177 aa21■□□□□ 0.95
COL5A3-201ENST00000264828 PLB1Q6P1J6 1458 aa21■□□□□ 0.95
COL5A3-201ENST00000264828 ATAD2Q6PL18 1390 aa21■□□□□ 0.95
COL5A3-201ENST00000264828 CLIP2Q9UDT6 1046 aa20.99■□□□□ 0.95
COL5A3-201ENST00000264828 BICRAQ9NZM4 1560 aa20.99■□□□□ 0.95
COL5A3-201ENST00000264828 POLR3GO15318 223 aaPredicted RBP20.99■□□□□ 0.95
COL5A3-201ENST00000264828 CD109Q6YHK3 1445 aa20.99■□□□□ 0.95
COL5A3-201ENST00000264828 SHTN1A0MZ66 631 aa20.99■□□□□ 0.95
COL5A3-201ENST00000264828 MAP2K1Q02750 393 aaPredicted RBP20.99■□□□□ 0.95
COL5A3-201ENST00000264828 BICDL1Q6ZP65 573 aa20.99■□□□□ 0.95
COL5A3-201ENST00000264828 INCENPQ9NQS7 918 aa20.99■□□□□ 0.95
COL5A3-201ENST00000264828 TRMT1Q9NXH9 659 aaKnown RBP20.99■□□□□ 0.95
COL5A3-201ENST00000264828 GRIN2AQ12879 1464 aa20.99■□□□□ 0.95
COL5A3-201ENST00000264828 SSFA2P28290 1259 aa20.99■□□□□ 0.95
COL5A3-201ENST00000264828 SPA17Q15506 151 aa20.99■□□□□ 0.95
COL5A3-201ENST00000264828 TRERF1Q96PN7 1200 aa20.99■□□□□ 0.95
COL5A3-201ENST00000264828 LARP6Q9BRS8 491 aaKnown RBP20.98■□□□□ 0.95
COL5A3-201ENST00000264828 THUMPD2Q9BTF0 503 aaKnown RBP20.98■□□□□ 0.95
COL5A3-201ENST00000264828 ADGRL1O94910 1474 aa20.98■□□□□ 0.95
COL5A3-201ENST00000264828 MPHOSPH10O00566 681 aaKnown RBP20.98■□□□□ 0.95
COL5A3-201ENST00000264828 NEBLO76041 1014 aa20.98■□□□□ 0.95
COL5A3-201ENST00000264828 SLFN5Q08AF3 891 aa20.98■□□□□ 0.95
COL5A3-201ENST00000264828 MX1P20591 662 aa20.98■□□□□ 0.95
COL5A3-201ENST00000264828 RPAP2Q8IXW5 612 aaPredicted RBP20.97■□□□□ 0.95
COL5A3-201ENST00000264828 KIF5CO60282 957 aa20.97■□□□□ 0.95
COL5A3-201ENST00000264828 CCDC178Q5BJE1 867 aa20.97■□□□□ 0.95
COL5A3-201ENST00000264828 GOPCQ9HD26 462 aa20.97■□□□□ 0.95
COL5A3-201ENST00000264828 GOLGA6L10A0A0M3HER8 536 aa20.97■□□□□ 0.95
COL5A3-201ENST00000264828 ZSCAN12O43309 604 aa20.97■□□□□ 0.95
COL5A3-201ENST00000264828 PIP4K2BP78356 416 aa20.97■□□□□ 0.95
COL5A3-201ENST00000264828 CKAP2LQ8IYA6 745 aa20.97■□□□□ 0.95
COL5A3-201ENST00000264828 KIF4BQ2VIQ3 1234 aa20.97■□□□□ 0.95
COL5A3-201ENST00000264828 C20orf194Q5TEA3 1177 aa20.97■□□□□ 0.95
COL5A3-201ENST00000264828 GIMAP7Q8NHV1 300 aa20.96■□□□□ 0.95
COL5A3-201ENST00000264828 ANO10Q9NW15 660 aa20.96■□□□□ 0.95
COL5A3-201ENST00000264828 BCCIPQ9P287 314 aaKnown RBP eCLIP20.96■□□□□ 0.95
COL5A3-201ENST00000264828 TOP1P11387 765 aaKnown RBP20.96■□□□□ 0.95
COL5A3-201ENST00000264828 CPLX3Q8WVH0 158 aa20.96■□□□□ 0.95
COL5A3-201ENST00000264828 ABCF2Q9UG63 623 aa20.96■□□□□ 0.95
COL5A3-201ENST00000264828 GBP3Q9H0R5 595 aa20.96■□□□□ 0.95
COL5A3-201ENST00000264828 BOLA2Q9H3K6 86 aa20.96■□□□□ 0.95
COL5A3-201ENST00000264828 USP25Q9UHP3 1055 aa20.96■□□□□ 0.95
COL5A3-201ENST00000264828 KIF18AQ8NI77 898 aa20.95■□□□□ 0.94
COL5A3-201ENST00000264828 PODXL2Q9NZ53 605 aa20.95■□□□□ 0.94
COL5A3-201ENST00000264828 MCM10Q7L590 875 aa20.95■□□□□ 0.94
COL5A3-201ENST00000264828 TMPOP42166 694 aaKnown RBP20.94■□□□□ 0.94
COL5A3-201ENST00000264828 C16orf45Q96MC5 204 aaPredicted RBP20.94■□□□□ 0.94
COL5A3-201ENST00000264828 MINDY4BA8MYZ0 360 aa20.94■□□□□ 0.94
COL5A3-201ENST00000264828 UBA5Q9GZZ9 404 aa20.93■□□□□ 0.94
COL5A3-201ENST00000264828 TNNT1P13805 278 aa20.93■□□□□ 0.94
COL5A3-201ENST00000264828 NFE2L2Q16236 605 aa20.93■□□□□ 0.94
COL5A3-201ENST00000264828 CCDC82Q8N4S0 544 aa20.93■□□□□ 0.94
COL5A3-201ENST00000264828 NUDT16Q96DE0 195 aaKnown RBP20.93■□□□□ 0.94
COL5A3-201ENST00000264828 METTL24Q5JXM2 366 aa20.93■□□□□ 0.94
COL5A3-201ENST00000264828 CACNA2D4Q7Z3S7 1137 aa20.93■□□□□ 0.94
COL5A3-201ENST00000264828 FKBP15Q5T1M5 1219 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms