RNA–Protein interactions for RNA: ENST00000264720.7

GTF3C2-201, Transcript of general transcription factor IIIC subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C2, Length 3,882 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-201ENST00000264720 VAMP4O75379 141 aa13.24□□□□□ -0.29
GTF3C2-201ENST00000264720 TSPYL4Q9UJ04 414 aa13.24□□□□□ -0.29
GTF3C2-201ENST00000264720 C1orf141Q5JVX7 400 aa13.24□□□□□ -0.29
GTF3C2-201ENST00000264720 DZIP1LQ8IYY4 767 aaKnown RBP13.24□□□□□ -0.29
GTF3C2-201ENST00000264720 PANK1Q8TE04 598 aa13.24□□□□□ -0.29
GTF3C2-201ENST00000264720 AXIN2Q9Y2T1 843 aa13.24□□□□□ -0.29
GTF3C2-201ENST00000264720 MRE11P49959 708 aa13.23□□□□□ -0.29
GTF3C2-201ENST00000264720 RAPGEF4Q8WZA2 1011 aa13.23□□□□□ -0.29
GTF3C2-201ENST00000264720 NCLP19338 710 aaKnown RBP13.23□□□□□ -0.29
GTF3C2-201ENST00000264720 ZNF530Q6P9A1 599 aaPredicted RBP13.23□□□□□ -0.29
GTF3C2-201ENST00000264720 PRDM11Q9NQV5 511 aa13.23□□□□□ -0.29
GTF3C2-201ENST00000264720 BABAM1Q9NWV8 329 aa13.23□□□□□ -0.29
GTF3C2-201ENST00000264720 COG6Q9Y2V7 657 aa13.23□□□□□ -0.29
GTF3C2-201ENST00000264720 KIAA0232Q92628 1395 aa13.23□□□□□ -0.29
GTF3C2-201ENST00000264720 CRB1P82279 1406 aa13.23□□□□□ -0.29
GTF3C2-201ENST00000264720 C8orf34Q49A92 452 aa13.23□□□□□ -0.29
GTF3C2-201ENST00000264720 FOXD4L1Q9NU39 408 aa13.23□□□□□ -0.29
GTF3C2-201ENST00000264720 RGPD2P0DJD1 1756 aa13.23□□□□□ -0.29
GTF3C2-201ENST00000264720 ELL2O00472 640 aaPredicted RBP13.22□□□□□ -0.29
GTF3C2-201ENST00000264720 BRPF1P55201 1214 aaPredicted RBP13.22□□□□□ -0.29
GTF3C2-201ENST00000264720 ATF7IPQ6VMQ6 1270 aa13.22□□□□□ -0.29
GTF3C2-201ENST00000264720 AKAP4Q5JQC9 854 aa13.22□□□□□ -0.29
GTF3C2-201ENST00000264720 RGPD5Q99666 1765 aa13.22□□□□□ -0.29
GTF3C2-201ENST00000264720 NCAPD2Q15021 1401 aa13.22□□□□□ -0.29
GTF3C2-201ENST00000264720 NHSL1Q5SYE7 1610 aa13.22□□□□□ -0.29
GTF3C2-201ENST00000264720 IGSF3O75054 1194 aa13.22□□□□□ -0.29
GTF3C2-201ENST00000264720 DNTTIP2Q5QJE6 756 aaKnown RBP13.22□□□□□ -0.29
GTF3C2-201ENST00000264720 CHRNA2Q15822 529 aa13.21□□□□□ -0.29
GTF3C2-201ENST00000264720 CLUAP1Q96AJ1 413 aa13.21□□□□□ -0.29
GTF3C2-201ENST00000264720 NOB1Q9ULX3 412 aaKnown RBP13.21□□□□□ -0.29
GTF3C2-201ENST00000264720 TATP17735 454 aaPredicted RBP13.21□□□□□ -0.29
GTF3C2-201ENST00000264720 TAF7Q15545 349 aaPredicted RBP13.21□□□□□ -0.29
GTF3C2-201ENST00000264720 C8orf58Q8NAV2 365 aa13.21□□□□□ -0.29
GTF3C2-201ENST00000264720 FAM208AQ9UK61 1670 aaKnown RBP13.21□□□□□ -0.29
GTF3C2-201ENST00000264720 TSPYL6Q8N831 410 aa13.21□□□□□ -0.3
GTF3C2-201ENST00000264720 CRYBG1Q9Y4K1 1723 aa13.2□□□□□ -0.3
GTF3C2-201ENST00000264720 ARHGAP45Q92619 1136 aa13.2□□□□□ -0.3
GTF3C2-201ENST00000264720 CAMTA1Q9Y6Y1 1673 aa13.2□□□□□ -0.3
GTF3C2-201ENST00000264720 SEC24BO95487 1268 aa13.2□□□□□ -0.3
GTF3C2-201ENST00000264720 UQCRHLA0A096LP55 91 aa13.19□□□□□ -0.3
GTF3C2-201ENST00000264720 UQCRHP07919 91 aa13.19□□□□□ -0.3
GTF3C2-201ENST00000264720 MCM4P33991 863 aa13.19□□□□□ -0.3
GTF3C2-201ENST00000264720 TEFQ10587 303 aa13.19□□□□□ -0.3
GTF3C2-201ENST00000264720 MVPQ14764 893 aaKnown RBP13.19□□□□□ -0.3
GTF3C2-201ENST00000264720 CENPQQ7L2Z9 268 aaPredicted RBP13.19□□□□□ -0.3
GTF3C2-201ENST00000264720 COL18A1P39060 1754 aa13.19□□□□□ -0.3
GTF3C2-201ENST00000264720 MRPL50Q8N5N7 158 aaKnown RBP13.19□□□□□ -0.3
GTF3C2-201ENST00000264720 IL17REQ8NFR9 667 aa13.19□□□□□ -0.3
GTF3C2-201ENST00000264720 CHMP4AQ9BY43 222 aa13.19□□□□□ -0.3
GTF3C2-201ENST00000264720 DDX19BQ9UMR2 479 aa13.19□□□□□ -0.3
GTF3C2-201ENST00000264720 SPG7Q9UQ90 795 aa13.19□□□□□ -0.3
GTF3C2-201ENST00000264720 TRIM27P14373 513 aa13.19□□□□□ -0.3
GTF3C2-201ENST00000264720 SOS1Q07889 1333 aaPredicted RBP13.19□□□□□ -0.3
GTF3C2-201ENST00000264720 API5Q9BZZ5 524 aaKnown RBP13.18□□□□□ -0.3
GTF3C2-201ENST00000264720 PLEKHG2Q9H7P9 1386 aa13.18□□□□□ -0.3
GTF3C2-201ENST00000264720 CBX1P83916 185 aa13.18□□□□□ -0.3
GTF3C2-201ENST00000264720 LRRC37A3O60309 1634 aa13.18□□□□□ -0.3
GTF3C2-201ENST00000264720 ITPRIPQ8IWB1 547 aa13.17□□□□□ -0.3
GTF3C2-201ENST00000264720 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.17□□□□□ -0.32e-6■■□□□ 13
GTF3C2-201ENST00000264720 MIS18AQ9NYP9 233 aa13.17□□□□□ -0.3
GTF3C2-201ENST00000264720 LTBP4Q8N2S1 1624 aa13.17□□□□□ -0.3
GTF3C2-201ENST00000264720 RLBP1P12271 317 aa13.17□□□□□ -0.3
GTF3C2-201ENST00000264720 GTF2E1P29083 439 aaPredicted RBP13.16□□□□□ -0.3
GTF3C2-201ENST00000264720 LMO7Q8WWI1 1683 aa13.16□□□□□ -0.3
GTF3C2-201ENST00000264720 STK31Q9BXU1 1019 aa13.16□□□□□ -0.3
GTF3C2-201ENST00000264720 CEMIPQ8WUJ3 1361 aa13.16□□□□□ -0.3
GTF3C2-201ENST00000264720 EVA1CP58658 441 aa13.16□□□□□ -0.3
GTF3C2-201ENST00000264720 TNNQ9UQP3 1299 aa13.16□□□□□ -0.3
GTF3C2-201ENST00000264720 OVOS2A0A0G2JMS6 1433 aa13.16□□□□□ -0.3
GTF3C2-201ENST00000264720 TOM1L2Q6ZVM7 507 aa13.15□□□□□ -0.3
GTF3C2-201ENST00000264720 ROBO1Q9Y6N7 1651 aa13.15□□□□□ -0.3
GTF3C2-201ENST00000264720 WDR17Q8IZU2 1322 aa13.15□□□□□ -0.3
GTF3C2-201ENST00000264720 TOM1O60784 492 aa13.15□□□□□ -0.3
GTF3C2-201ENST00000264720 MPNDQ8N594 471 aa13.15□□□□□ -0.3
GTF3C2-201ENST00000264720 RNMTO43148 476 aaKnown RBP13.15□□□□□ -0.3
GTF3C2-201ENST00000264720 MPRIPQ6WCQ1 1025 aa13.14□□□□□ -0.31
GTF3C2-201ENST00000264720 CCDC30Q5VVM6 783 aa13.14□□□□□ -0.31
GTF3C2-201ENST00000264720 AHDC1Q5TGY3 1603 aaPredicted RBP13.14□□□□□ -0.31
GTF3C2-201ENST00000264720 HSP90AB1P08238 724 aaKnown RBP13.14□□□□□ -0.31
GTF3C2-201ENST00000264720 KRT24Q2M2I5 525 aa13.14□□□□□ -0.31
GTF3C2-201ENST00000264720 ABCA3Q99758 1704 aa13.14□□□□□ -0.31
GTF3C2-201ENST00000264720 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.14□□□□□ -0.31
GTF3C2-201ENST00000264720 IFNL2Q8IZJ0 200 aa13.14□□□□□ -0.31
GTF3C2-201ENST00000264720 TMEM57Q8N5G2 664 aa13.14□□□□□ -0.31
GTF3C2-201ENST00000264720 LGR6Q9HBX8 967 aa13.14□□□□□ -0.31
GTF3C2-201ENST00000264720 RWDD1Q9H446 243 aaPredicted RBP13.13□□□□□ -0.31
GTF3C2-201ENST00000264720 PTPRCP08575 1304 aa13.13□□□□□ -0.31
GTF3C2-201ENST00000264720 BTBD11A6QL63 1104 aa13.13□□□□□ -0.31
GTF3C2-201ENST00000264720 ZBTB22O15209 634 aa13.13□□□□□ -0.31
GTF3C2-201ENST00000264720 KDM2BQ8NHM5 1336 aa13.12□□□□□ -0.31
GTF3C2-201ENST00000264720 MFAP1P55081 439 aaKnown RBP13.12□□□□□ -0.31
GTF3C2-201ENST00000264720 TSC1Q92574 1164 aa13.12□□□□□ -0.31
GTF3C2-201ENST00000264720 CGNQ9P2M7 1197 aaKnown RBP13.12□□□□□ -0.31
GTF3C2-201ENST00000264720 FAM177BA6PVY3 158 aa13.12□□□□□ -0.31
GTF3C2-201ENST00000264720 SLC4A2P04920 1241 aa13.12□□□□□ -0.31
GTF3C2-201ENST00000264720 TPRNQ4KMQ1 711 aa13.12□□□□□ -0.31
GTF3C2-201ENST00000264720 CARD10Q9BWT7 1032 aa13.11□□□□□ -0.31
GTF3C2-201ENST00000264720 TBC1D2Q9BYX2 928 aa13.11□□□□□ -0.31
GTF3C2-201ENST00000264720 STRN4Q9NRL3 753 aa13.11□□□□□ -0.31
GTF3C2-201ENST00000264720 COL5A2P05997 1499 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms