RNA–Protein interactions for RNA: ENST00000264001.8

CKLF-201, Transcript of chemokine like factor, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CKLF, Length 669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-201ENST00000264001 DIAPH1O60610 1272 aaKnown RBP27.33■■□□□ 1.97
CKLF-201ENST00000264001 AK7Q96M32 723 aa27.33■■□□□ 1.97
CKLF-201ENST00000264001 UTRNP46939 3433 aa27.32■■□□□ 1.96
CKLF-201ENST00000264001 FLAD1Q8NFF5 587 aa27.32■■□□□ 1.96
CKLF-201ENST00000264001 HMOX1P09601 288 aa27.31■■□□□ 1.96
CKLF-201ENST00000264001 ATP6V1AP38606 617 aa27.31■■□□□ 1.96
CKLF-201ENST00000264001 LINC00116Q8NCU8 138 aa27.31■■□□□ 1.96
CKLF-201ENST00000264001 CABP4P57796 275 aa27.3■■□□□ 1.96
CKLF-201ENST00000264001 ITPK1Q13572 414 aa27.3■■□□□ 1.96
CKLF-201ENST00000264001 KLHL34Q8N239 644 aa27.3■■□□□ 1.96
CKLF-201ENST00000264001 SCN11AQ9UI33 1791 aa27.3■■□□□ 1.96
CKLF-201ENST00000264001 COL3A1P02461 1466 aaPredicted RBP27.28■■□□□ 1.96
CKLF-201ENST00000264001 AMIGO3Q86WK7 504 aa27.28■■□□□ 1.96
CKLF-201ENST00000264001 MSL1Q68DK7 614 aa27.27■■□□□ 1.96
CKLF-201ENST00000264001 VIRMAQ69YN4 1812 aaKnown RBP27.26■■□□□ 1.95
CKLF-201ENST00000264001 SMIM5Q71RC9 77 aa27.26■■□□□ 1.95
CKLF-201ENST00000264001 ZNF831Q5JPB2 1677 aa27.25■■□□□ 1.95
CKLF-201ENST00000264001 PHF14O94880 888 aa27.25■■□□□ 1.95
CKLF-201ENST00000264001 AKAP4Q5JQC9 854 aa27.25■■□□□ 1.95
CKLF-201ENST00000264001 SLC4A9Q96Q91 983 aa27.25■■□□□ 1.95
CKLF-201ENST00000264001 RBM42Q9BTD8 480 aaKnown RBP27.25■■□□□ 1.95
CKLF-201ENST00000264001 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.24■■□□□ 1.95
CKLF-201ENST00000264001 NFATC2IPQ8NCF5 419 aa27.24■■□□□ 1.95
CKLF-201ENST00000264001 SSFA2P28290 1259 aa27.23■■□□□ 1.95
CKLF-201ENST00000264001 GPR162Q16538 588 aa27.23■■□□□ 1.95
CKLF-201ENST00000264001 GNPATO15228 680 aa27.22■■□□□ 1.95
CKLF-201ENST00000264001 U2SURPO15042 1029 aaKnown RBP27.21■■□□□ 1.95
CKLF-201ENST00000264001 ZNF784Q8NCA9 323 aaPredicted RBP27.21■■□□□ 1.95
CKLF-201ENST00000264001 COL5A3P25940 1745 aaPredicted RBP27.21■■□□□ 1.95
CKLF-201ENST00000264001 MTHFSDQ2M296 383 aaKnown RBP27.2■■□□□ 1.94
CKLF-201ENST00000264001 LGR6Q9HBX8 967 aa27.19■■□□□ 1.94
CKLF-201ENST00000264001 NLGN2Q8NFZ4 835 aa27.18■■□□□ 1.94
CKLF-201ENST00000264001 MYH14Q7Z406 1995 aaKnown RBP27.17■■□□□ 1.94
CKLF-201ENST00000264001 RNMTO43148 476 aaKnown RBP27.17■■□□□ 1.94
CKLF-201ENST00000264001 PTCD1O75127 700 aaKnown RBP27.17■■□□□ 1.94
CKLF-201ENST00000264001 PELP1Q8IZL8 1130 aaKnown RBP27.17■■□□□ 1.94
CKLF-201ENST00000264001 CFAP53Q96M91 514 aa27.16■■□□□ 1.94
CKLF-201ENST00000264001 SLC52A2Q9HAB3 445 aa27.16■■□□□ 1.94
CKLF-201ENST00000264001 ADAMTS7Q9UKP4 1686 aa27.15■■□□□ 1.94
CKLF-201ENST00000264001 MRC1P22897 1456 aa27.15■■□□□ 1.94
CKLF-201ENST00000264001 RC3H1Q5TC82 1133 aaKnown RBP27.15■■□□□ 1.94
CKLF-201ENST00000264001 RTCBQ9Y3I0 505 aaKnown RBP27.15■■□□□ 1.94
CKLF-201ENST00000264001 CNTNAP4Q9C0A0 1308 aa27.15■■□□□ 1.94
CKLF-201ENST00000264001 GOLGB1Q14789 3259 aaKnown RBP27.14■■□□□ 1.94
CKLF-201ENST00000264001 PPP2R1AP30153 589 aa27.14■■□□□ 1.94
CKLF-201ENST00000264001 TJP1Q07157 1748 aa27.13■■□□□ 1.93
CKLF-201ENST00000264001 TRAPPC3LQ5T215 181 aa27.11■■□□□ 1.93
CKLF-201ENST00000264001 CICQ96RK0 1608 aaPredicted RBP27.11■■□□□ 1.93
CKLF-201ENST00000264001 RPS6KA4O75676 772 aa27.09■■□□□ 1.93
CKLF-201ENST00000264001 GAS2L2Q8NHY3 880 aa27.09■■□□□ 1.93
CKLF-201ENST00000264001 CD2APQ9Y5K6 639 aa27.09■■□□□ 1.93
CKLF-201ENST00000264001 ADRA2BP18089 450 aa27.08■■□□□ 1.93
CKLF-201ENST00000264001 SLC39A6Q13433 755 aa27.08■■□□□ 1.93
CKLF-201ENST00000264001 ARHGEF1Q92888 912 aaKnown RBP27.08■■□□□ 1.93
CKLF-201ENST00000264001 NUDCQ9Y266 331 aa27.08■■□□□ 1.93
CKLF-201ENST00000264001 CRKLP46109 303 aaKnown RBP27.07■■□□□ 1.92
CKLF-201ENST00000264001 RSPH6AQ9H0K4 717 aa27.07■■□□□ 1.92
CKLF-201ENST00000264001 PRKAR2BP31323 418 aa27.06■■□□□ 1.92
CKLF-201ENST00000264001 C4AP0C0L4 1744 aa27.06■■□□□ 1.92
CKLF-201ENST00000264001 GNAT3A8MTJ3 354 aa27.05■■□□□ 1.92
CKLF-201ENST00000264001 GRIN3BO60391 1043 aa27.05■■□□□ 1.92
CKLF-201ENST00000264001 KIF13BQ9NQT8 1826 aa27.04■■□□□ 1.92
CKLF-201ENST00000264001 YBX3P16989 372 aaKnown RBP eCLIP27.04■■□□□ 1.921e-7■■■■□ 20.5
CKLF-201ENST00000264001 DNAJC10Q8IXB1 793 aa27.04■■□□□ 1.92
CKLF-201ENST00000264001 PHACTR3Q96KR7 559 aa27.04■■□□□ 1.92
CKLF-201ENST00000264001 KCPQ6ZWJ8 1503 aa27.04■■□□□ 1.92
CKLF-201ENST00000264001 U2AF1L5P0DN76 240 aaPredicted RBP27.03■■□□□ 1.92
CKLF-201ENST00000264001 RFC4P35249 363 aa27.03■■□□□ 1.92
CKLF-201ENST00000264001 U2AF1Q01081 240 aaKnown RBP eCLIP27.03■■□□□ 1.92
CKLF-201ENST00000264001 IL17REQ8NFR9 667 aa27.03■■□□□ 1.92
CKLF-201ENST00000264001 UBR2Q8IWV8 1755 aa27.02■■□□□ 1.92
CKLF-201ENST00000264001 MMP10P09238 476 aa27.02■■□□□ 1.92
CKLF-201ENST00000264001 SIPA1L3O60292 1781 aaPredicted RBP27.02■■□□□ 1.92
CKLF-201ENST00000264001 NLGN1Q8N2Q7 840 aa27.01■■□□□ 1.91
CKLF-201ENST00000264001 GYS1P13807 737 aa27■■□□□ 1.91
CKLF-201ENST00000264001 TEFQ10587 303 aa27■■□□□ 1.91
CKLF-201ENST00000264001 INTS5Q6P9B9 1019 aaKnown RBP27■■□□□ 1.91
CKLF-201ENST00000264001 FCHSD2O94868 740 aa26.98■■□□□ 1.91
CKLF-201ENST00000264001 CCDC87Q9NVE4 849 aa26.98■■□□□ 1.91
CKLF-201ENST00000264001 KIAA1551Q9HCM1 1747 aa26.97■■□□□ 1.91
CKLF-201ENST00000264001 CYP19A1P11511 503 aaPredicted RBP26.97■■□□□ 1.91
CKLF-201ENST00000264001 TTC5Q8N0Z6 440 aa26.97■■□□□ 1.91
CKLF-201ENST00000264001 VSIG10Q8N0Z9 540 aa26.96■■□□□ 1.91
CKLF-201ENST00000264001 SRP68Q9UHB9 627 aaKnown RBP26.96■■□□□ 1.91
CKLF-201ENST00000264001 CEMIPQ8WUJ3 1361 aa26.96■■□□□ 1.91
CKLF-201ENST00000264001 SOS1Q07889 1333 aaPredicted RBP26.94■■□□□ 1.9
CKLF-201ENST00000264001 USP42Q9H9J4 1324 aaKnown RBP26.94■■□□□ 1.9
CKLF-201ENST00000264001 N4BP2Q86UW6 1770 aaPredicted RBP26.94■■□□□ 1.9
CKLF-201ENST00000264001 GIGYF1O75420 1035 aaPredicted RBP26.93■■□□□ 1.9
CKLF-201ENST00000264001 C1QTNF8P60827 252 aa26.93■■□□□ 1.9
CKLF-201ENST00000264001 ZNF790Q6PG37 636 aa26.93■■□□□ 1.9
CKLF-201ENST00000264001 ZNF496Q96IT1 587 aaPredicted RBP26.92■■□□□ 1.9
CKLF-201ENST00000264001 ZBTB1Q9Y2K1 713 aa26.92■■□□□ 1.9
CKLF-201ENST00000264001 PARP3Q9Y6F1 533 aa26.92■■□□□ 1.9
CKLF-201ENST00000264001 BRCA1P38398 1863 aaKnown RBP26.91■■□□□ 1.9
CKLF-201ENST00000264001 HEG1Q9ULI3 1381 aa26.9■■□□□ 1.9
CKLF-201ENST00000264001 FKBP8Q14318 412 aa26.9■■□□□ 1.9
CKLF-201ENST00000264001 WWC3Q9ULE0 1092 aa26.9■■□□□ 1.9
CKLF-201ENST00000264001 C10orf71Q711Q0 1435 aa26.9■■□□□ 1.9
CKLF-201ENST00000264001 ATP10DQ9P241 1426 aa26.9■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms