RNA–Protein interactions for RNA: ENST00000263774.8

NDUFS3-201, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDUFS3, Length 958 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-201ENST00000263774 NUDCQ9Y266 331 aa28.84■■■□□ 2.21
NDUFS3-201ENST00000263774 VIRMAQ69YN4 1812 aaKnown RBP28.83■■■□□ 2.21
NDUFS3-201ENST00000263774 ATP6V1AP38606 617 aa28.83■■■□□ 2.21
NDUFS3-201ENST00000263774 COL23A1Q86Y22 540 aaPredicted RBP28.83■■■□□ 2.21
NDUFS3-201ENST00000263774 LGR6Q9HBX8 967 aa28.83■■■□□ 2.21
NDUFS3-201ENST00000263774 ITPK1Q13572 414 aa28.82■■■□□ 2.2
NDUFS3-201ENST00000263774 LINC00116Q8NCU8 138 aa28.82■■■□□ 2.2
NDUFS3-201ENST00000263774 RNMTO43148 476 aaKnown RBP28.81■■■□□ 2.2
NDUFS3-201ENST00000263774 ZEB1P37275 1124 aaPredicted RBP28.8■■■□□ 2.2
NDUFS3-201ENST00000263774 AK7Q96M32 723 aa28.8■■■□□ 2.2
NDUFS3-201ENST00000263774 SLC4A9Q96Q91 983 aa28.8■■■□□ 2.2
NDUFS3-201ENST00000263774 RBM42Q9BTD8 480 aaKnown RBP28.8■■■□□ 2.2
NDUFS3-201ENST00000263774 RSPH6AQ9H0K4 717 aa28.79■■■□□ 2.2
NDUFS3-201ENST00000263774 COL24A1Q17RW2 1714 aa28.79■■■□□ 2.2
NDUFS3-201ENST00000263774 ZNF831Q5JPB2 1677 aa28.79■■■□□ 2.2
NDUFS3-201ENST00000263774 ADAMTS7Q9UKP4 1686 aa28.79■■■□□ 2.2
NDUFS3-201ENST00000263774 UBR3Q6ZT12 1888 aa28.78■■■□□ 2.2
NDUFS3-201ENST00000263774 MSH5O43196 834 aa28.78■■■□□ 2.2
NDUFS3-201ENST00000263774 U2AF1L5P0DN76 240 aaPredicted RBP28.78■■■□□ 2.2
NDUFS3-201ENST00000263774 U2AF1Q01081 240 aaKnown RBP eCLIP28.78■■■□□ 2.2
NDUFS3-201ENST00000263774 SLC52A2Q9HAB3 445 aa28.78■■■□□ 2.2
NDUFS3-201ENST00000263774 PRKAR2BP31323 418 aa28.77■■■□□ 2.2
NDUFS3-201ENST00000263774 AMIGO3Q86WK7 504 aa28.77■■■□□ 2.2
NDUFS3-201ENST00000263774 FLAD1Q8NFF5 587 aa28.77■■■□□ 2.2
NDUFS3-201ENST00000263774 GAS2L2Q8NHY3 880 aa28.77■■■□□ 2.2
NDUFS3-201ENST00000263774 MRC1P22897 1456 aa28.76■■■□□ 2.19
NDUFS3-201ENST00000263774 PHACTR3Q96KR7 559 aa28.75■■■□□ 2.19
NDUFS3-201ENST00000263774 ARXQ96QS3 562 aa28.75■■■□□ 2.19
NDUFS3-201ENST00000263774 PTCD1O75127 700 aaKnown RBP28.73■■■□□ 2.19
NDUFS3-201ENST00000263774 SMIM5Q71RC9 77 aa28.73■■■□□ 2.19
NDUFS3-201ENST00000263774 MAP3K5Q99683 1374 aa28.73■■■□□ 2.19
NDUFS3-201ENST00000263774 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.72■■■□□ 2.19
NDUFS3-201ENST00000263774 GNAT3A8MTJ3 354 aa28.72■■■□□ 2.19
NDUFS3-201ENST00000263774 FCHSD2O94868 740 aa28.72■■■□□ 2.19
NDUFS3-201ENST00000263774 POLD1P28340 1107 aa28.72■■■□□ 2.19
NDUFS3-201ENST00000263774 RALBP1Q15311 655 aa28.72■■■□□ 2.19
NDUFS3-201ENST00000263774 COL5A3P25940 1745 aaPredicted RBP28.72■■■□□ 2.19
NDUFS3-201ENST00000263774 PHF14O94880 888 aa28.71■■■□□ 2.19
NDUFS3-201ENST00000263774 SSFA2P28290 1259 aa28.71■■■□□ 2.19
NDUFS3-201ENST00000263774 FHDC1Q9C0D6 1143 aaPredicted RBP28.71■■■□□ 2.19
NDUFS3-201ENST00000263774 GNPATO15228 680 aa28.7■■■□□ 2.18
NDUFS3-201ENST00000263774 IL17REQ8NFR9 667 aa28.7■■■□□ 2.18
NDUFS3-201ENST00000263774 SLC39A6Q13433 755 aa28.68■■■□□ 2.18
NDUFS3-201ENST00000263774 MSL1Q68DK7 614 aa28.68■■■□□ 2.18
NDUFS3-201ENST00000263774 SYT17Q9BSW7 474 aa28.68■■■□□ 2.18
NDUFS3-201ENST00000263774 RC3H1Q5TC82 1133 aaKnown RBP28.67■■■□□ 2.18
NDUFS3-201ENST00000263774 CNTNAP4Q9C0A0 1308 aa28.67■■■□□ 2.18
NDUFS3-201ENST00000263774 TJP1Q07157 1748 aa28.66■■■□□ 2.18
NDUFS3-201ENST00000263774 MYH14Q7Z406 1995 aaKnown RBP28.66■■■□□ 2.18
NDUFS3-201ENST00000263774 CICQ96RK0 1608 aaPredicted RBP28.65■■■□□ 2.18
NDUFS3-201ENST00000263774 RTCBQ9Y3I0 505 aaKnown RBP28.64■■■□□ 2.18
NDUFS3-201ENST00000263774 SIPA1L3O60292 1781 aaPredicted RBP28.63■■■□□ 2.17
NDUFS3-201ENST00000263774 TEFQ10587 303 aa28.63■■■□□ 2.17
NDUFS3-201ENST00000263774 KCPQ6ZWJ8 1503 aa28.63■■■□□ 2.17
NDUFS3-201ENST00000263774 CEMIPQ8WUJ3 1361 aa28.62■■■□□ 2.17
NDUFS3-201ENST00000263774 RPS6KA4O75676 772 aa28.61■■■□□ 2.17
NDUFS3-201ENST00000263774 DNAJC10Q8IXB1 793 aa28.61■■■□□ 2.17
NDUFS3-201ENST00000263774 CRKLP46109 303 aaKnown RBP28.6■■■□□ 2.17
NDUFS3-201ENST00000263774 TRAPPC3LQ5T215 181 aa28.6■■■□□ 2.17
NDUFS3-201ENST00000263774 MYBBP1AQ9BQG0 1328 aaKnown RBP28.6■■■□□ 2.17
NDUFS3-201ENST00000263774 UBR2Q8IWV8 1755 aa28.6■■■□□ 2.17
NDUFS3-201ENST00000263774 KLHL34Q8N239 644 aa28.59■■■□□ 2.17
NDUFS3-201ENST00000263774 ADRA2BP18089 450 aa28.58■■■□□ 2.17
NDUFS3-201ENST00000263774 TTC5Q8N0Z6 440 aa28.57■■■□□ 2.16
NDUFS3-201ENST00000263774 ARHGEF1Q92888 912 aaKnown RBP28.57■■■□□ 2.16
NDUFS3-201ENST00000263774 PLEKHF1Q96S99 279 aa28.57■■■□□ 2.16
NDUFS3-201ENST00000263774 DCAF8L1A6NGE4 600 aa28.56■■■□□ 2.16
NDUFS3-201ENST00000263774 VSIG10Q8N0Z9 540 aa28.56■■■□□ 2.16
NDUFS3-201ENST00000263774 RTF1Q92541 710 aaKnown RBP28.56■■■□□ 2.16
NDUFS3-201ENST00000263774 NEFMP07197 916 aa28.55■■■□□ 2.16
NDUFS3-201ENST00000263774 INTS5Q6P9B9 1019 aaKnown RBP28.55■■■□□ 2.16
NDUFS3-201ENST00000263774 ZNF790Q6PG37 636 aa28.55■■■□□ 2.16
NDUFS3-201ENST00000263774 MCM10Q7L590 875 aa28.55■■■□□ 2.16
NDUFS3-201ENST00000263774 HTATSF1O43719 755 aaKnown RBP28.54■■■□□ 2.16
NDUFS3-201ENST00000263774 CYP19A1P11511 503 aaPredicted RBP28.54■■■□□ 2.16
NDUFS3-201ENST00000263774 DLG5Q8TDM6 1919 aa28.53■■■□□ 2.16
NDUFS3-201ENST00000263774 DCTN1Q14203 1278 aa28.53■■■□□ 2.16
NDUFS3-201ENST00000263774 ZNF496Q96IT1 587 aaPredicted RBP28.53■■■□□ 2.16
NDUFS3-201ENST00000263774 CCDC87Q9NVE4 849 aa28.53■■■□□ 2.16
NDUFS3-201ENST00000263774 C4AP0C0L4 1744 aa28.52■■■□□ 2.16
NDUFS3-201ENST00000263774 RFC4P35249 363 aa28.52■■■□□ 2.16
NDUFS3-201ENST00000263774 PNNQ9H307 717 aaKnown RBP28.52■■■□□ 2.16
NDUFS3-201ENST00000263774 PRKRIP1Q9H875 184 aaPredicted RBP28.52■■■□□ 2.16
NDUFS3-201ENST00000263774 BTBD11A6QL63 1104 aa28.51■■■□□ 2.15
NDUFS3-201ENST00000263774 NLGN2Q8NFZ4 835 aa28.5■■■□□ 2.15
NDUFS3-201ENST00000263774 HEG1Q9ULI3 1381 aa28.5■■■□□ 2.15
NDUFS3-201ENST00000263774 KCNQ3O43525 872 aa28.49■■■□□ 2.15
NDUFS3-201ENST00000263774 GYS1P13807 737 aa28.48■■■□□ 2.15
NDUFS3-201ENST00000263774 NFE2L2Q16236 605 aa28.48■■■□□ 2.15
NDUFS3-201ENST00000263774 NLGN1Q8N2Q7 840 aa28.48■■■□□ 2.15
NDUFS3-201ENST00000263774 MAPK8IP3Q9UPT6 1336 aa28.47■■■□□ 2.15
NDUFS3-201ENST00000263774 FMNL2Q96PY5 1086 aa28.47■■■□□ 2.15
NDUFS3-201ENST00000263774 SOS1Q07889 1333 aaPredicted RBP28.46■■■□□ 2.15
NDUFS3-201ENST00000263774 MMP10P09238 476 aa28.46■■■□□ 2.15
NDUFS3-201ENST00000263774 ZBTB1Q9Y2K1 713 aa28.46■■■□□ 2.15
NDUFS3-201ENST00000263774 CD2APQ9Y5K6 639 aa28.46■■■□□ 2.15
NDUFS3-201ENST00000263774 STARD3NLO95772 234 aa28.45■■■□□ 2.14
NDUFS3-201ENST00000263774 SRP68Q9UHB9 627 aaKnown RBP28.45■■■□□ 2.14
NDUFS3-201ENST00000263774 USP42Q9H9J4 1324 aaKnown RBP28.44■■■□□ 2.14
NDUFS3-201ENST00000263774 ZNF316A6NFI3 1004 aaPredicted RBP28.44■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms