RNA–Protein interactions for RNA: ENST00000263401.9

COMMD9-201, Transcript of COMM domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COMMD9, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-201ENST00000263401 ARHGEF25Q86VW2 580 aa13.03□□□□□ -0.32
COMMD9-201ENST00000263401 HAP1P54257 671 aaPredicted RBP13.02□□□□□ -0.32
COMMD9-201ENST00000263401 CCDC30Q5VVM6 783 aa13.02□□□□□ -0.32
COMMD9-201ENST00000263401 KCNH5Q8NCM2 988 aa13.02□□□□□ -0.33
COMMD9-201ENST00000263401 RBM42Q9BTD8 480 aaKnown RBP13.02□□□□□ -0.33
COMMD9-201ENST00000263401 KIF24Q5T7B8 1368 aa13.02□□□□□ -0.33
COMMD9-201ENST00000263401 PNMA6EA0A0J9YXQ4 647 aa13.02□□□□□ -0.33
COMMD9-201ENST00000263401 HTATSF1O43719 755 aaKnown RBP13.02□□□□□ -0.33
COMMD9-201ENST00000263401 CHPF2Q9P2E5 772 aa13.01□□□□□ -0.33
COMMD9-201ENST00000263401 C1orf167Q5SNV9 1468 aa13.01□□□□□ -0.33
COMMD9-201ENST00000263401 CD2BP2O95400 341 aaKnown RBP13□□□□□ -0.33
COMMD9-201ENST00000263401 CHRNA2Q15822 529 aa13□□□□□ -0.33
COMMD9-201ENST00000263401 RPAP2Q8IXW5 612 aaPredicted RBP13□□□□□ -0.33
COMMD9-201ENST00000263401 FOXD4L1Q9NU39 408 aa13□□□□□ -0.33
COMMD9-201ENST00000263401 LRRFIP2Q9Y608 721 aaKnown RBP13□□□□□ -0.33
COMMD9-201ENST00000263401 STRCP1A6NGW2 1772 aa13□□□□□ -0.33
COMMD9-201ENST00000263401 TMEM94Q12767 1356 aa13□□□□□ -0.33
COMMD9-201ENST00000263401 EIF4A1P60842 406 aaKnown RBP12.99□□□□□ -0.33
COMMD9-201ENST00000263401 ANTXR1Q9H6X2 564 aa12.99□□□□□ -0.33
COMMD9-201ENST00000263401 BTBD11A6QL63 1104 aa12.99□□□□□ -0.33
COMMD9-201ENST00000263401 CCT4P50991 539 aaKnown RBP12.99□□□□□ -0.33
COMMD9-201ENST00000263401 TEFQ10587 303 aa12.99□□□□□ -0.33
COMMD9-201ENST00000263401 C19orf44Q9H6X5 657 aa12.99□□□□□ -0.33
COMMD9-201ENST00000263401 CEMIPQ8WUJ3 1361 aa12.99□□□□□ -0.33
COMMD9-201ENST00000263401 TTC22Q5TAA0 569 aa12.99□□□□□ -0.33
COMMD9-201ENST00000263401 PROSER3Q2NL68 480 aa12.98□□□□□ -0.33
COMMD9-201ENST00000263401 KIF2CQ99661 725 aa12.98□□□□□ -0.33
COMMD9-201ENST00000263401 TRPM3Q9HCF6 1732 aaPredicted RBP12.98□□□□□ -0.33
COMMD9-201ENST00000263401 GNAI2P04899 355 aa12.98□□□□□ -0.33
COMMD9-201ENST00000263401 ATF3P18847 181 aa12.97□□□□□ -0.33
COMMD9-201ENST00000263401 USP35Q9P2H5 1018 aa12.97□□□□□ -0.33
COMMD9-201ENST00000263401 RNMTO43148 476 aaKnown RBP12.97□□□□□ -0.33
COMMD9-201ENST00000263401 SDSP20132 328 aa12.97□□□□□ -0.33
COMMD9-201ENST00000263401 PLEKHO1Q53GL0 409 aaPredicted RBP12.97□□□□□ -0.33
COMMD9-201ENST00000263401 USP44Q9H0E7 712 aa12.97□□□□□ -0.33
COMMD9-201ENST00000263401 NLRP2Q9NX02 1062 aa12.97□□□□□ -0.33
COMMD9-201ENST00000263401 SLC39A6Q13433 755 aa12.96□□□□□ -0.33
COMMD9-201ENST00000263401 AKAP4Q5JQC9 854 aa12.96□□□□□ -0.33
COMMD9-201ENST00000263401 C1orf141Q5JVX7 400 aa12.96□□□□□ -0.33
COMMD9-201ENST00000263401 CDC45O75419 566 aa12.96□□□□□ -0.33
COMMD9-201ENST00000263401 MED1Q15648 1581 aaPredicted RBP12.96□□□□□ -0.34
COMMD9-201ENST00000263401 SLIT3O75094 1523 aa12.96□□□□□ -0.34
COMMD9-201ENST00000263401 PI4KAP2A4QPH2 592 aa12.96□□□□□ -0.34
COMMD9-201ENST00000263401 PI4KAP1Q8N8J0 262 aa12.96□□□□□ -0.34
COMMD9-201ENST00000263401 DNAJC5Q9H3Z4 198 aa12.96□□□□□ -0.34
COMMD9-201ENST00000263401 RBM25P49756 843 aaKnown RBP12.95□□□□□ -0.34
COMMD9-201ENST00000263401 NBPF7P0C2Y1 421 aaPredicted RBP12.95□□□□□ -0.34
COMMD9-201ENST00000263401 IL1RAPL2Q9NP60 686 aa12.95□□□□□ -0.34
COMMD9-201ENST00000263401 PIP4K2AP48426 406 aaPredicted RBP12.94□□□□□ -0.34
COMMD9-201ENST00000263401 HSCBQ8IWL3 235 aa12.94□□□□□ -0.34
COMMD9-201ENST00000263401 ERBB3P21860 1342 aa12.94□□□□□ -0.34
COMMD9-201ENST00000263401 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.94□□□□□ -0.34
COMMD9-201ENST00000263401 MST1RQ04912 1400 aa12.94□□□□□ -0.34
COMMD9-201ENST00000263401 KDM3BQ7LBC6 1761 aa12.94□□□□□ -0.34
COMMD9-201ENST00000263401 HMMRO75330 724 aa12.93□□□□□ -0.34
COMMD9-201ENST00000263401 LMO7Q8WWI1 1683 aa12.93□□□□□ -0.34
COMMD9-201ENST00000263401 UBTFL1P0CB47 393 aaPredicted RBP12.93□□□□□ -0.34
COMMD9-201ENST00000263401 CSB-PGBD3P0DP91 1061 aa12.93□□□□□ -0.34
COMMD9-201ENST00000263401 AIMP1Q12904 312 aaKnown RBP12.93□□□□□ -0.34
COMMD9-201ENST00000263401 GNAI3P08754 354 aa12.92□□□□□ -0.34
COMMD9-201ENST00000263401 PDE1AP54750 535 aa12.92□□□□□ -0.34
COMMD9-201ENST00000263401 CACNA1FO60840 1977 aa12.92□□□□□ -0.34
COMMD9-201ENST00000263401 MAP4K4O95819 1239 aaPredicted RBP12.92□□□□□ -0.34
COMMD9-201ENST00000263401 ATP8B2P98198 1209 aa12.92□□□□□ -0.34
COMMD9-201ENST00000263401 PHRF1Q9P1Y6 1649 aaKnown RBP12.92□□□□□ -0.34
COMMD9-201ENST00000263401 PPP1R42Q7Z4L9 355 aa12.91□□□□□ -0.34
COMMD9-201ENST00000263401 NUTM1Q86Y26 1132 aa12.91□□□□□ -0.34
COMMD9-201ENST00000263401 SRCIN1Q9C0H9 1055 aa12.91□□□□□ -0.34
COMMD9-201ENST00000263401 ALS2Q96Q42 1657 aa12.91□□□□□ -0.34
COMMD9-201ENST00000263401 GSE1Q14687 1217 aa12.91□□□□□ -0.34
COMMD9-201ENST00000263401 CWF19L2Q2TBE0 894 aaKnown RBP12.91□□□□□ -0.34
COMMD9-201ENST00000263401 AMOTQ4VCS5 1084 aa12.91□□□□□ -0.34
COMMD9-201ENST00000263401 ADCY9O60503 1353 aa12.91□□□□□ -0.34
COMMD9-201ENST00000263401 GIGYF1O75420 1035 aaPredicted RBP12.9□□□□□ -0.34
COMMD9-201ENST00000263401 HSP90AB1P08238 724 aaKnown RBP12.9□□□□□ -0.34
COMMD9-201ENST00000263401 UNC5CLQ8IV45 518 aa12.9□□□□□ -0.34
COMMD9-201ENST00000263401 DNAAF4Q8WXU2 420 aa12.9□□□□□ -0.34
COMMD9-201ENST00000263401 LRRCC1Q9C099 1032 aa12.9□□□□□ -0.34
COMMD9-201ENST00000263401 BEND3Q5T5X7 828 aa12.9□□□□□ -0.34
COMMD9-201ENST00000263401 ARXQ96QS3 562 aa12.9□□□□□ -0.34
COMMD9-201ENST00000263401 BABAM1Q9NWV8 329 aa12.9□□□□□ -0.34
COMMD9-201ENST00000263401 MEGF6O75095 1541 aa12.9□□□□□ -0.34
COMMD9-201ENST00000263401 NFATC2IPQ8NCF5 419 aa12.9□□□□□ -0.35
COMMD9-201ENST00000263401 RAPGEF4Q8WZA2 1011 aa12.9□□□□□ -0.35
COMMD9-201ENST00000263401 MAP3K2Q9Y2U5 619 aa12.9□□□□□ -0.35
COMMD9-201ENST00000263401 SRGAP3O43295 1099 aa12.89□□□□□ -0.35
COMMD9-201ENST00000263401 MYL6BP14649 208 aa12.89□□□□□ -0.35
COMMD9-201ENST00000263401 RILPL2Q969X0 211 aa12.89□□□□□ -0.35
COMMD9-201ENST00000263401 AK9Q5TCS8 1911 aa12.89□□□□□ -0.35
COMMD9-201ENST00000263401 SOS1Q07889 1333 aaPredicted RBP12.89□□□□□ -0.35
COMMD9-201ENST00000263401 SURF6O75683 361 aaKnown RBP12.89□□□□□ -0.35
COMMD9-201ENST00000263401 USP26Q9BXU7 913 aa12.89□□□□□ -0.35
COMMD9-201ENST00000263401 KIF1AQ12756 1690 aa12.89□□□□□ -0.35
COMMD9-201ENST00000263401 JARID2Q92833 1246 aaPredicted RBP12.88□□□□□ -0.35
COMMD9-201ENST00000263401 IBTKQ9P2D0 1353 aaPredicted RBP12.88□□□□□ -0.35
COMMD9-201ENST00000263401 TRIM6-TRIM34B2RNG4 842 aa12.88□□□□□ -0.35
COMMD9-201ENST00000263401 MX1P20591 662 aa12.88□□□□□ -0.35
COMMD9-201ENST00000263401 KDM6AO15550 1401 aaPredicted RBP12.88□□□□□ -0.35
COMMD9-201ENST00000263401 NCAPD2Q15021 1401 aa12.88□□□□□ -0.35
COMMD9-201ENST00000263401 SALL3Q9BXA9 1300 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms