RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 FMNL2Q96PY5 1086 aa10.07□□□□□ -0.8
PTPN3-201ENST00000262539 TMEM57Q8N5G2 664 aa10.06□□□□□ -0.8
PTPN3-201ENST00000262539 PHACTR3Q96KR7 559 aa10.06□□□□□ -0.8
PTPN3-201ENST00000262539 KIAA1211Q6ZU35 1233 aa10.06□□□□□ -0.8
PTPN3-201ENST00000262539 CLASRPQ8N2M8 674 aaKnown RBP10.06□□□□□ -0.8
PTPN3-201ENST00000262539 C9orf78Q9NZ63 289 aaPredicted RBP10.06□□□□□ -0.8
PTPN3-201ENST00000262539 AOX1Q06278 1338 aa10.06□□□□□ -0.8
PTPN3-201ENST00000262539 ARHGEF28Q8N1W1 1705 aaKnown RBP10.06□□□□□ -0.8
PTPN3-201ENST00000262539 ELL2O00472 640 aaPredicted RBP10.06□□□□□ -0.8
PTPN3-201ENST00000262539 MTHFSDQ2M296 383 aaKnown RBP10.06□□□□□ -0.8
PTPN3-201ENST00000262539 HSP90AB3PQ58FF7 597 aa10.06□□□□□ -0.8
PTPN3-201ENST00000262539 LINS1Q8NG48 757 aa10.06□□□□□ -0.8
PTPN3-201ENST00000262539 CTDP1Q9Y5B0 961 aaPredicted RBP10.06□□□□□ -0.8
PTPN3-201ENST00000262539 ST18O60284 1047 aa10.05□□□□□ -0.8
PTPN3-201ENST00000262539 COL3A1P02461 1466 aaPredicted RBP10.05□□□□□ -0.8
PTPN3-201ENST00000262539 C1orf167Q5SNV9 1468 aa10.05□□□□□ -0.8
PTPN3-201ENST00000262539 CHAF1AQ13111 956 aaPredicted RBP10.05□□□□□ -0.8
PTPN3-201ENST00000262539 CHD1LQ86WJ1 897 aa10.05□□□□□ -0.8
PTPN3-201ENST00000262539 DNAAF4Q8WXU2 420 aa10.05□□□□□ -0.8
PTPN3-201ENST00000262539 FBXW7Q969H0 707 aa10.05□□□□□ -0.8
PTPN3-201ENST00000262539 DCTPP1Q9H773 170 aa10.05□□□□□ -0.8
PTPN3-201ENST00000262539 ANKRD45Q5TZF3 282 aa10.04□□□□□ -0.8
PTPN3-201ENST00000262539 DRC7Q8IY82 874 aa10.04□□□□□ -0.8
PTPN3-201ENST00000262539 RABEP1Q15276 862 aa10.04□□□□□ -0.8
PTPN3-201ENST00000262539 TRIM34Q9BYJ4 488 aa10.04□□□□□ -0.8
PTPN3-201ENST00000262539 SLC4A10Q6U841 1118 aa10.04□□□□□ -0.8
PTPN3-201ENST00000262539 KIF3AQ9Y496 699 aa10.04□□□□□ -0.8
PTPN3-201ENST00000262539 ERBB3P21860 1342 aa10.04□□□□□ -0.8
PTPN3-201ENST00000262539 SNRPA1P09661 255 aaKnown RBP10.04□□□□□ -0.8
PTPN3-201ENST00000262539 DDX21Q9NR30 783 aaKnown RBP eCLIP10.04□□□□□ -0.8
PTPN3-201ENST00000262539 TOM1O60784 492 aa10.03□□□□□ -0.8
PTPN3-201ENST00000262539 L1TD1Q5T7N2 865 aaKnown RBP10.03□□□□□ -0.8
PTPN3-201ENST00000262539 GBP4Q96PP9 640 aa10.03□□□□□ -0.8
PTPN3-201ENST00000262539 G3BP1Q13283 466 aaKnown RBP eCLIP10.03□□□□□ -0.8
PTPN3-201ENST00000262539 MARCH6O60337 910 aa10.03□□□□□ -0.8
PTPN3-201ENST00000262539 CPDO75976 1380 aa10.03□□□□□ -0.8
PTPN3-201ENST00000262539 KNDC1Q76NI1 1749 aa10.03□□□□□ -0.8
PTPN3-201ENST00000262539 BTBD11A6QL63 1104 aa10.03□□□□□ -0.8
PTPN3-201ENST00000262539 RAD21O60216 631 aa10.03□□□□□ -0.8
PTPN3-201ENST00000262539 KIF1BPQ96EK5 621 aa10.03□□□□□ -0.8
PTPN3-201ENST00000262539 PCDH11XQ9BZA7 1347 aa10.03□□□□□ -0.8
PTPN3-201ENST00000262539 PCDH11YQ9BZA8 1340 aa10.03□□□□□ -0.8
PTPN3-201ENST00000262539 RASSF8Q8NHQ8 419 aa10.02□□□□□ -0.8
PTPN3-201ENST00000262539 FBXO3Q9UK99 471 aa10.02□□□□□ -0.8
PTPN3-201ENST00000262539 SPINK5Q9NQ38 1064 aaPredicted RBP10.02□□□□□ -0.81
PTPN3-201ENST00000262539 SLAIN2Q9P270 581 aa10.02□□□□□ -0.81
PTPN3-201ENST00000262539 IBTKQ9P2D0 1353 aaPredicted RBP10.02□□□□□ -0.81
PTPN3-201ENST00000262539 TOM1L2Q6ZVM7 507 aa10.02□□□□□ -0.81
PTPN3-201ENST00000262539 AEBP1Q8IUX7 1158 aa10.02□□□□□ -0.81
PTPN3-201ENST00000262539 KSR2Q6VAB6 950 aa10.01□□□□□ -0.81
PTPN3-201ENST00000262539 LRRCC1Q9C099 1032 aa10.01□□□□□ -0.81
PTPN3-201ENST00000262539 SPATA31A3Q5VYP0 1347 aa10.01□□□□□ -0.81
PTPN3-201ENST00000262539 NCKAP5LQ9HCH0 1330 aa10.01□□□□□ -0.81
PTPN3-201ENST00000262539 ERVV-2B6SEH9 535 aa10.01□□□□□ -0.81
PTPN3-201ENST00000262539 CABP4P57796 275 aa10.01□□□□□ -0.81
PTPN3-201ENST00000262539 MCM10Q7L590 875 aa10.01□□□□□ -0.81
PTPN3-201ENST00000262539 TCEAL9Q9UHQ7 104 aa10.01□□□□□ -0.81
PTPN3-201ENST00000262539 MFAP1P55081 439 aaKnown RBP10.01□□□□□ -0.81
PTPN3-201ENST00000262539 TOMM22Q9NS69 142 aa10.01□□□□□ -0.81
PTPN3-201ENST00000262539 MST1RQ04912 1400 aa10.01□□□□□ -0.81
PTPN3-201ENST00000262539 TNS3Q68CZ2 1445 aa10.01□□□□□ -0.81
PTPN3-201ENST00000262539 ZBTB7BO15156 539 aaPredicted RBP10□□□□□ -0.81
PTPN3-201ENST00000262539 NUCB1Q02818 461 aa10□□□□□ -0.81
PTPN3-201ENST00000262539 RNF20Q5VTR2 975 aa10□□□□□ -0.81
PTPN3-201ENST00000262539 TSPOAP1O95153 1857 aa10□□□□□ -0.81
PTPN3-201ENST00000262539 GLRX3O76003 335 aaKnown RBP10□□□□□ -0.81
PTPN3-201ENST00000262539 ABCC6O95255 1503 aa10□□□□□ -0.81
PTPN3-201ENST00000262539 C20orf194Q5TEA3 1177 aa10□□□□□ -0.81
PTPN3-201ENST00000262539 SMARCC1Q92922 1105 aaPredicted RBP10□□□□□ -0.81
PTPN3-201ENST00000262539 C22orf23Q9BZE7 217 aa10□□□□□ -0.81
PTPN3-201ENST00000262539 CHMP5Q9NZZ3 219 aa10□□□□□ -0.81
PTPN3-201ENST00000262539 RNMTO43148 476 aaKnown RBP10□□□□□ -0.81
PTPN3-201ENST00000262539 IGSF3O75054 1194 aa10□□□□□ -0.81
PTPN3-201ENST00000262539 ATP8B2P98198 1209 aa10□□□□□ -0.81
PTPN3-201ENST00000262539 ATP6V1DQ9Y5K8 247 aa10□□□□□ -0.81
PTPN3-201ENST00000262539 STARD3NLO95772 234 aa9.99□□□□□ -0.81
PTPN3-201ENST00000262539 IL2RBP14784 551 aa9.99□□□□□ -0.81
PTPN3-201ENST00000262539 SKOR2Q2VWA4 1001 aaPredicted RBP9.99□□□□□ -0.81
PTPN3-201ENST00000262539 C8orf58Q8NAV2 365 aa9.99□□□□□ -0.81
PTPN3-201ENST00000262539 ZRANB1Q9UGI0 708 aa9.99□□□□□ -0.81
PTPN3-201ENST00000262539 ZKSCAN1P17029 563 aaPredicted RBP9.99□□□□□ -0.81
PTPN3-201ENST00000262539 RIC3Q7Z5B4 369 aa9.99□□□□□ -0.81
PTPN3-201ENST00000262539 WDR17Q8IZU2 1322 aa9.99□□□□□ -0.81
PTPN3-201ENST00000262539 ANAPC15P60006 121 aa9.99□□□□□ -0.81
PTPN3-201ENST00000262539 ORAI2Q96SN7 254 aa9.99□□□□□ -0.81
PTPN3-201ENST00000262539 CARD10Q9BWT7 1032 aa9.99□□□□□ -0.81
PTPN3-201ENST00000262539 IFIT2P09913 472 aaKnown RBP9.99□□□□□ -0.81
PTPN3-201ENST00000262539 NUCB2P80303 420 aa9.99□□□□□ -0.81
PTPN3-201ENST00000262539 NUTM2GQ5VZR2 741 aa9.99□□□□□ -0.81
PTPN3-201ENST00000262539 CREBRFQ8IUR6 639 aa9.99□□□□□ -0.81
PTPN3-201ENST00000262539 ZC3H6P61129 1189 aaKnown RBP9.98□□□□□ -0.81
PTPN3-201ENST00000262539 LNPKQ9C0E8 428 aa9.98□□□□□ -0.81
PTPN3-201ENST00000262539 TTC41PQ6P2S7 1318 aa9.98□□□□□ -0.81
PTPN3-201ENST00000262539 VSIG10Q8N0Z9 540 aa9.98□□□□□ -0.81
PTPN3-201ENST00000262539 THUMPD2Q9BTF0 503 aaKnown RBP9.98□□□□□ -0.81
PTPN3-201ENST00000262539 ZCRB1Q8TBF4 217 aaKnown RBP9.98□□□□□ -0.81
PTPN3-201ENST00000262539 SYTL4Q96C24 671 aaPredicted RBP9.98□□□□□ -0.81
PTPN3-201ENST00000262539 DDX11L8A8MPP1 907 aa9.98□□□□□ -0.81
PTPN3-201ENST00000262539 PCDHB15Q9Y5E8 787 aa9.98□□□□□ -0.81
PTPN3-201ENST00000262539 EIF2S2P20042 333 aaKnown RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms