RNA–Protein interactions for RNA: ENST00000262304.8

PKD1-201, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PKD1, Length 14,138 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-201ENST00000262304 CKAP2LQ8IYA6 745 aa11.88□□□□□ -0.51
PKD1-201ENST00000262304 NLRP6P59044 892 aa11.88□□□□□ -0.51
PKD1-201ENST00000262304 HMGXB3Q12766 1538 aa11.88□□□□□ -0.51
PKD1-201ENST00000262304 CCDC69A6NI79 296 aa11.88□□□□□ -0.51
PKD1-201ENST00000262304 GUCY1B3Q02153 619 aa11.88□□□□□ -0.51
PKD1-201ENST00000262304 TXLNBQ8N3L3 684 aa11.88□□□□□ -0.51
PKD1-201ENST00000262304 TBC1D2BQ9UPU7 963 aa11.88□□□□□ -0.51
PKD1-201ENST00000262304 DNAAF4Q8WXU2 420 aa11.88□□□□□ -0.51
PKD1-201ENST00000262304 JAKMIP1Q96N16 626 aaKnown RBP11.88□□□□□ -0.51
PKD1-201ENST00000262304 CEP57L1Q8IYX8 460 aa11.88□□□□□ -0.51
PKD1-201ENST00000262304 K7ELQ4 463 aaPredicted RBP11.88□□□□□ -0.51
PKD1-201ENST00000262304 MPHOSPH10O00566 681 aaKnown RBP11.88□□□□□ -0.51
PKD1-201ENST00000262304 ABTB2Q8N961 1025 aa11.88□□□□□ -0.51
PKD1-201ENST00000262304 CFAP57Q96MR6 1250 aa11.88□□□□□ -0.51
PKD1-201ENST00000262304 RUNDC1Q96C34 613 aa11.88□□□□□ -0.51
PKD1-201ENST00000262304 MAP3K11Q16584 847 aa11.88□□□□□ -0.51
PKD1-201ENST00000262304 KIF5CO60282 957 aa11.87□□□□□ -0.51
PKD1-201ENST00000262304 ESCO1Q5FWF5 840 aa11.87□□□□□ -0.51
PKD1-201ENST00000262304 NAP1L3Q99457 506 aaPredicted RBP11.87□□□□□ -0.51
PKD1-201ENST00000262304 SMARCC1Q92922 1105 aaPredicted RBP11.87□□□□□ -0.51
PKD1-201ENST00000262304 DAAM2Q86T65 1068 aa11.87□□□□□ -0.51
PKD1-201ENST00000262304 TSR2Q969E8 191 aaKnown RBP11.87□□□□□ -0.51
PKD1-201ENST00000262304 JMYQ8N9B5 988 aa11.87□□□□□ -0.51
PKD1-201ENST00000262304 EFCAB5A4FU69 1503 aa11.87□□□□□ -0.51
PKD1-201ENST00000262304 KIF18AQ8NI77 898 aa11.87□□□□□ -0.51
PKD1-201ENST00000262304 ZSCAN30Q86W11 494 aa11.87□□□□□ -0.51
PKD1-201ENST00000262304 PDRG1Q9NUG6 133 aa11.87□□□□□ -0.51
PKD1-201ENST00000262304 CCDC85AQ96PX6 553 aaPredicted RBP11.87□□□□□ -0.51
PKD1-201ENST00000262304 RBM5P52756 815 aaKnown RBP eCLIP11.86□□□□□ -0.513e-8■□□□□ 9.1
PKD1-201ENST00000262304 SPA17Q15506 151 aa11.86□□□□□ -0.51
PKD1-201ENST00000262304 SPECC1Q5M775 1068 aa11.86□□□□□ -0.51
PKD1-201ENST00000262304 HECW1Q76N89 1606 aa11.86□□□□□ -0.51
PKD1-201ENST00000262304 EHBP1L1Q8N3D4 1523 aa11.86□□□□□ -0.51
PKD1-201ENST00000262304 ZNF76P36508 570 aa11.86□□□□□ -0.51
PKD1-201ENST00000262304 FKBP4Q02790 459 aaKnown RBP eCLIP11.86□□□□□ -0.51
PKD1-201ENST00000262304 HOOK3Q86VS8 718 aa11.86□□□□□ -0.51
PKD1-201ENST00000262304 MYCNP04198 464 aaPredicted RBP11.86□□□□□ -0.51
PKD1-201ENST00000262304 GGNBP2Q9H3C7 697 aa11.86□□□□□ -0.51
PKD1-201ENST00000262304 TOP2BQ02880 1626 aa11.86□□□□□ -0.51
PKD1-201ENST00000262304 SCAPERQ9BY12 1400 aa11.86□□□□□ -0.51
PKD1-201ENST00000262304 MXRA7P84157 204 aa11.86□□□□□ -0.51
PKD1-201ENST00000262304 PROSER2Q86WR7 435 aaPredicted RBP11.86□□□□□ -0.51
PKD1-201ENST00000262304 GNAI1P63096 354 aa11.86□□□□□ -0.51
PKD1-201ENST00000262304 WDR33Q9C0J8 1336 aaKnown RBP11.86□□□□□ -0.51
PKD1-201ENST00000262304 CLIP2Q9UDT6 1046 aa11.86□□□□□ -0.51
PKD1-201ENST00000262304 PPP1R14CQ8TAE6 165 aa11.86□□□□□ -0.51
PKD1-201ENST00000262304 SFPQP23246 707 aaKnown RBP eCLIP11.86□□□□□ -0.51
PKD1-201ENST00000262304 TRIM21P19474 475 aaKnown RBP11.85□□□□□ -0.51
PKD1-201ENST00000262304 PDE1CQ14123 709 aaPredicted RBP11.85□□□□□ -0.51
PKD1-201ENST00000262304 CWC27Q6UX04 472 aaKnown RBP11.85□□□□□ -0.51
PKD1-201ENST00000262304 CCDC6Q16204 474 aa11.85□□□□□ -0.51
PKD1-201ENST00000262304 TRMT1LQ7Z2T5 733 aaKnown RBP11.85□□□□□ -0.51
PKD1-201ENST00000262304 MAP9Q49MG5 647 aa11.85□□□□□ -0.51
PKD1-201ENST00000262304 LARP1Q6PKG0 1096 aaKnown RBP11.85□□□□□ -0.51
PKD1-201ENST00000262304 NUP88Q99567 741 aaPredicted RBP11.85□□□□□ -0.51
PKD1-201ENST00000262304 SMIM23A6NLE4 172 aa11.85□□□□□ -0.51
PKD1-201ENST00000262304 SMARCA5O60264 1052 aaPredicted RBP11.85□□□□□ -0.51
PKD1-201ENST00000262304 CNNM1Q9NRU3 951 aa11.85□□□□□ -0.51
PKD1-201ENST00000262304 PIP4K2AP48426 406 aaPredicted RBP11.85□□□□□ -0.51
PKD1-201ENST00000262304 GDPD2Q9HCC8 539 aa11.85□□□□□ -0.51
PKD1-201ENST00000262304 PPM1EQ8WY54 764 aa11.84□□□□□ -0.51
PKD1-201ENST00000262304 CASTP20810 708 aaKnown RBP11.84□□□□□ -0.51
PKD1-201ENST00000262304 ZWINTO95229 277 aa11.84□□□□□ -0.51
PKD1-201ENST00000262304 DACH1Q9UI36 760 aa11.84□□□□□ -0.51
PKD1-201ENST00000262304 MCM6Q14566 821 aa11.84□□□□□ -0.51
PKD1-201ENST00000262304 DZIP1Q86YF9 867 aaKnown RBP11.84□□□□□ -0.51
PKD1-201ENST00000262304 TRIM22Q8IYM9 498 aa11.84□□□□□ -0.51
PKD1-201ENST00000262304 CCDC7Q96M83 1385 aa11.84□□□□□ -0.51
PKD1-201ENST00000262304 SF3A3Q12874 501 aaKnown RBP eCLIP11.84□□□□□ -0.511e-6■■■■■ 33.3
PKD1-201ENST00000262304 PRAM1Q96QH2 718 aa11.84□□□□□ -0.51
PKD1-201ENST00000262304 POLA1P09884 1462 aaPredicted RBP11.84□□□□□ -0.51
PKD1-201ENST00000262304 HOMER2Q9NSB8 354 aa11.84□□□□□ -0.51
PKD1-201ENST00000262304 USP25Q9UHP3 1055 aa11.84□□□□□ -0.51
PKD1-201ENST00000262304 MSL1Q68DK7 614 aa11.83□□□□□ -0.51
PKD1-201ENST00000262304 MICALL1Q8N3F8 863 aa11.83□□□□□ -0.51
PKD1-201ENST00000262304 ZNF397Q8NF99 534 aaPredicted RBP11.83□□□□□ -0.51
PKD1-201ENST00000262304 DNMBPQ6XZF7 1577 aa11.83□□□□□ -0.52
PKD1-201ENST00000262304 TOP1P11387 765 aaKnown RBP11.83□□□□□ -0.52
PKD1-201ENST00000262304 TMC6Q7Z403 805 aa11.83□□□□□ -0.52
PKD1-201ENST00000262304 ERC1Q8IUD2 1116 aa11.83□□□□□ -0.52
PKD1-201ENST00000262304 PUF60Q9UHX1 559 aaKnown RBP11.83□□□□□ -0.52
PKD1-201ENST00000262304 PANK2Q9BZ23 570 aa11.83□□□□□ -0.52
PKD1-201ENST00000262304 ARAP1Q96P48 1450 aa11.83□□□□□ -0.52
PKD1-201ENST00000262304 HSP90AA4PQ58FG1 418 aa11.83□□□□□ -0.52
PKD1-201ENST00000262304 SUPT6HQ7KZ85 1726 aaKnown RBP11.83□□□□□ -0.52
PKD1-201ENST00000262304 ARL1P40616 181 aaPredicted RBP11.83□□□□□ -0.52
PKD1-201ENST00000262304 TMEM110-MUSTN1A8MSY1 372 aa11.82□□□□□ -0.52
PKD1-201ENST00000262304 NOP2P46087 812 aaKnown RBP11.82□□□□□ -0.52
PKD1-201ENST00000262304 CFAP70Q5T0N1 1121 aa11.82□□□□□ -0.52
PKD1-201ENST00000262304 MMRN2Q9H8L6 949 aa11.82□□□□□ -0.52
PKD1-201ENST00000262304 FEZ1Q99689 392 aa11.82□□□□□ -0.52
PKD1-201ENST00000262304 RABEP2Q9H5N1 569 aa11.82□□□□□ -0.52
PKD1-201ENST00000262304 THEMISQ8N1K5 641 aaPredicted RBP11.82□□□□□ -0.52
PKD1-201ENST00000262304 TTC36A6NLP5 189 aa11.82□□□□□ -0.52
PKD1-201ENST00000262304 RAB11FIP4Q86YS3 637 aa11.82□□□□□ -0.52
PKD1-201ENST00000262304 TDO2P48775 406 aa11.82□□□□□ -0.52
PKD1-201ENST00000262304 SSFA2P28290 1259 aa11.82□□□□□ -0.52
PKD1-201ENST00000262304 POTEJP0CG39 1038 aa11.82□□□□□ -0.52
PKD1-201ENST00000262304 SEPT14Q6ZU15 432 aa11.82□□□□□ -0.52
PKD1-201ENST00000262304 WASHC2AQ641Q2 1341 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms