RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 MBIPQ9NS73 344 aa35.76■■■■□ 3.31
SMARCD3-201ENST00000262188 FANCIQ9NVI1 1328 aa35.76■■■■□ 3.31
SMARCD3-201ENST00000262188 CALD1Q05682 793 aaKnown RBP35.75■■■■□ 3.31
SMARCD3-201ENST00000262188 NFATC2IPQ8NCF5 419 aa35.75■■■■□ 3.31
SMARCD3-201ENST00000262188 CFAP44Q96MT7 982 aa35.75■■■■□ 3.31
SMARCD3-201ENST00000262188 IFT57Q9NWB7 429 aa35.75■■■■□ 3.31
SMARCD3-201ENST00000262188 RXRBP28702 533 aa35.73■■■■□ 3.31
SMARCD3-201ENST00000262188 GNAI1P63096 354 aa35.73■■■■□ 3.31
SMARCD3-201ENST00000262188 TAF7Q15545 349 aaPredicted RBP35.72■■■■□ 3.31
SMARCD3-201ENST00000262188 SLC52A2Q9HAB3 445 aa35.72■■■■□ 3.31
SMARCD3-201ENST00000262188 CHL1O00533 1208 aa35.71■■■■□ 3.31
SMARCD3-201ENST00000262188 ACSBG1Q96GR2 724 aa35.71■■■■□ 3.31
SMARCD3-201ENST00000262188 CABP4P57796 275 aa35.71■■■■□ 3.31
SMARCD3-201ENST00000262188 MYH16Q9H6N6 1097 aa35.71■■■■□ 3.31
SMARCD3-201ENST00000262188 KAT6BQ8WYB5 2073 aa35.7■■■■□ 3.31
SMARCD3-201ENST00000262188 TSPYL4Q9UJ04 414 aa35.7■■■■□ 3.31
SMARCD3-201ENST00000262188 KCNQ3O43525 872 aa35.69■■■■□ 3.3
SMARCD3-201ENST00000262188 BRWD3Q6RI45 1802 aa35.69■■■■□ 3.3
SMARCD3-201ENST00000262188 SIPA1L3O60292 1781 aaPredicted RBP35.68■■■■□ 3.3
SMARCD3-201ENST00000262188 KRT24Q2M2I5 525 aa35.68■■■■□ 3.3
SMARCD3-201ENST00000262188 BTBD11A6QL63 1104 aa35.67■■■■□ 3.3
SMARCD3-201ENST00000262188 SLC39A6Q13433 755 aa35.67■■■■□ 3.3
SMARCD3-201ENST00000262188 DOT1LQ8TEK3 1739 aa35.67■■■■□ 3.3
SMARCD3-201ENST00000262188 SYTL4Q96C24 671 aaPredicted RBP35.67■■■■□ 3.3
SMARCD3-201ENST00000262188 MRC1P22897 1456 aa35.66■■■■□ 3.3
SMARCD3-201ENST00000262188 EXOSC9Q06265 439 aaKnown RBP35.66■■■■□ 3.3
SMARCD3-201ENST00000262188 ERVV-2B6SEH9 535 aa35.64■■■■□ 3.3
SMARCD3-201ENST00000262188 PRIM1P49642 420 aaKnown RBP35.64■■■■□ 3.3
SMARCD3-201ENST00000262188 RGS12O14924 1447 aa35.64■■■■□ 3.3
SMARCD3-201ENST00000262188 ELL2O00472 640 aaPredicted RBP35.63■■■■□ 3.29
SMARCD3-201ENST00000262188 EP400Q96L91 3159 aa35.63■■■■□ 3.29
SMARCD3-201ENST00000262188 ITGB4P16144 1822 aa35.62■■■■□ 3.29
SMARCD3-201ENST00000262188 KCNQ2O43526 872 aa35.62■■■■□ 3.29
SMARCD3-201ENST00000262188 TSPYL6Q8N831 410 aa35.61■■■■□ 3.29
SMARCD3-201ENST00000262188 PIGBQ92521 554 aa35.61■■■■□ 3.29
SMARCD3-201ENST00000262188 TMOD3Q9NYL9 352 aa35.61■■■■□ 3.29
SMARCD3-201ENST00000262188 PTF1AQ7RTS3 328 aa35.6■■■■□ 3.29
SMARCD3-201ENST00000262188 KRT27Q7Z3Y8 459 aa35.6■■■■□ 3.29
SMARCD3-201ENST00000262188 C8orf58Q8NAV2 365 aa35.6■■■■□ 3.29
SMARCD3-201ENST00000262188 KDM3BQ7LBC6 1761 aa35.59■■■■□ 3.29
SMARCD3-201ENST00000262188 ZNF790Q6PG37 636 aa35.55■■■■□ 3.28
SMARCD3-201ENST00000262188 ASAP1Q9ULH1 1129 aa35.54■■■■□ 3.28
SMARCD3-201ENST00000262188 BCL9O00512 1426 aa35.53■■■■□ 3.28
SMARCD3-201ENST00000262188 EIF4A1P60842 406 aaKnown RBP35.53■■■■□ 3.28
SMARCD3-201ENST00000262188 BABAM1Q9NWV8 329 aa35.52■■■■□ 3.28
SMARCD3-201ENST00000262188 PRAMEF22A3QJZ6 481 aa35.49■■■■□ 3.27
SMARCD3-201ENST00000262188 TWISTNBQ3B726 338 aaPredicted RBP35.49■■■■□ 3.27
SMARCD3-201ENST00000262188 ZNF496Q96IT1 587 aaPredicted RBP35.49■■■■□ 3.27
SMARCD3-201ENST00000262188 ATG3Q9NT62 314 aa35.49■■■■□ 3.27
SMARCD3-201ENST00000262188 TCERG1O14776 1098 aaKnown RBP35.48■■■■□ 3.27
SMARCD3-201ENST00000262188 TTC5Q8N0Z6 440 aa35.48■■■■□ 3.27
SMARCD3-201ENST00000262188 PTCD1O75127 700 aaKnown RBP35.47■■■■□ 3.27
SMARCD3-201ENST00000262188 PAPPAQ13219 1627 aa35.47■■■■□ 3.27
SMARCD3-201ENST00000262188 BCL2L13Q9BXK5 485 aa35.46■■■■□ 3.27
SMARCD3-201ENST00000262188 RCAN3Q9UKA8 241 aa35.46■■■■□ 3.27
SMARCD3-201ENST00000262188 VAMP4O75379 141 aa35.45■■■■□ 3.27
SMARCD3-201ENST00000262188 SBF2Q86WG5 1849 aa35.45■■■■□ 3.27
SMARCD3-201ENST00000262188 NECTIN2Q92692 538 aa35.45■■■■□ 3.27
SMARCD3-201ENST00000262188 KCPQ6ZWJ8 1503 aa35.42■■■■□ 3.26
SMARCD3-201ENST00000262188 FAM196AQ6ZSG2 479 aa35.42■■■■□ 3.26
SMARCD3-201ENST00000262188 NHSQ6T4R5 1651 aa35.42■■■■□ 3.26
SMARCD3-201ENST00000262188 BCAR3O75815 825 aa35.4■■■■□ 3.26
SMARCD3-201ENST00000262188 TRIM37O94972 964 aa35.4■■■■□ 3.26
SMARCD3-201ENST00000262188 RBM42Q9BTD8 480 aaKnown RBP35.4■■■■□ 3.26
SMARCD3-201ENST00000262188 UBR2Q8IWV8 1755 aa35.4■■■■□ 3.26
SMARCD3-201ENST00000262188 HEG1Q9ULI3 1381 aa35.38■■■■□ 3.26
SMARCD3-201ENST00000262188 GIGYF1O75420 1035 aaPredicted RBP35.38■■■■□ 3.25
SMARCD3-201ENST00000262188 RARSP54136 660 aaKnown RBP35.38■■■■□ 3.25
SMARCD3-201ENST00000262188 FMNL2Q96PY5 1086 aa35.38■■■■□ 3.25
SMARCD3-201ENST00000262188 C5P01031 1676 aa35.38■■■■□ 3.25
SMARCD3-201ENST00000262188 BTAF1O14981 1849 aa35.37■■■■□ 3.25
SMARCD3-201ENST00000262188 EIF2S2P20042 333 aaKnown RBP35.37■■■■□ 3.25
SMARCD3-201ENST00000262188 SSH1Q8WYL5 1049 aa35.36■■■■□ 3.25
SMARCD3-201ENST00000262188 SLC4A9Q96Q91 983 aa35.36■■■■□ 3.25
SMARCD3-201ENST00000262188 USP16Q9Y5T5 823 aa35.33■■■■□ 3.25
SMARCD3-201ENST00000262188 PALLDQ8WX93 1383 aa35.32■■■■□ 3.25
SMARCD3-201ENST00000262188 CT47B1P0C2W7 299 aaPredicted RBP35.32■■■■□ 3.24
SMARCD3-201ENST00000262188 BCL11BQ9C0K0 894 aaPredicted RBP35.32■■■■□ 3.24
SMARCD3-201ENST00000262188 KCNQ4P56696 695 aa35.31■■■■□ 3.24
SMARCD3-201ENST00000262188 SNRPA1P09661 255 aaKnown RBP35.31■■■■□ 3.24
SMARCD3-201ENST00000262188 HDGFL1Q5TGJ6 251 aa35.31■■■■□ 3.24
SMARCD3-201ENST00000262188 SMC4Q9NTJ3 1288 aa35.31■■■■□ 3.24
SMARCD3-201ENST00000262188 PLIN1O60240 522 aa35.3■■■■□ 3.24
SMARCD3-201ENST00000262188 PIP4K2AP48426 406 aaPredicted RBP35.29■■■■□ 3.24
SMARCD3-201ENST00000262188 DNAJC10Q8IXB1 793 aa35.28■■■■□ 3.24
SMARCD3-201ENST00000262188 ANXA1P04083 346 aa35.27■■■■□ 3.24
SMARCD3-201ENST00000262188 LOC102724428A0A0B4J2F2 783 aa35.25■■■■□ 3.23
SMARCD3-201ENST00000262188 SIK1P57059 783 aa35.25■■■■□ 3.23
SMARCD3-201ENST00000262188 HOXB7P09629 217 aa35.24■■■■□ 3.23
SMARCD3-201ENST00000262188 MRPL50Q8N5N7 158 aaKnown RBP35.24■■■■□ 3.23
SMARCD3-201ENST00000262188 SMARCC1Q92922 1105 aaPredicted RBP35.24■■■■□ 3.23
SMARCD3-201ENST00000262188 CHPF2Q9P2E5 772 aa35.24■■■■□ 3.23
SMARCD3-201ENST00000262188 FRAT1Q92837 279 aaPredicted RBP35.24■■■■□ 3.23
SMARCD3-201ENST00000262188 PROSER3Q2NL68 480 aa35.23■■■■□ 3.23
SMARCD3-201ENST00000262188 ATP6V1AP38606 617 aa35.22■■■■□ 3.23
SMARCD3-201ENST00000262188 ALDH1L2Q3SY69 923 aa35.22■■■■□ 3.23
SMARCD3-201ENST00000262188 CCDC30Q5VVM6 783 aa35.22■■■■□ 3.23
SMARCD3-201ENST00000262188 SLC4A2P04920 1241 aa35.22■■■■□ 3.23
SMARCD3-201ENST00000262188 ITPK1Q13572 414 aa35.22■■■■□ 3.23
SMARCD3-201ENST00000262188 G2E3Q7L622 706 aa35.21■■■■□ 3.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms