RNA–Protein interactions for RNA: ENST00000262043.7

PHF3-201, Transcript of PHD finger protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PHF3, Length 8,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-201ENST00000262043 PPP6R1Q9UPN7 881 aa12.02□□□□□ -0.49
PHF3-201ENST00000262043 CTTNBP2Q8WZ74 1663 aa12.02□□□□□ -0.49
PHF3-201ENST00000262043 ANKRD62A6NC57 917 aa12.02□□□□□ -0.49
PHF3-201ENST00000262043 KIAA1328Q86T90 577 aa12.02□□□□□ -0.49
PHF3-201ENST00000262043 LRRFIP2Q9Y608 721 aaKnown RBP12.02□□□□□ -0.49
PHF3-201ENST00000262043 ITSN2Q9NZM3 1697 aa12.01□□□□□ -0.49
PHF3-201ENST00000262043 RAB11FIP3O75154 756 aa12.01□□□□□ -0.49
PHF3-201ENST00000262043 MAP3K11Q16584 847 aa12.01□□□□□ -0.49
PHF3-201ENST00000262043 CCDC83Q8IWF9 413 aa12.01□□□□□ -0.49
PHF3-201ENST00000262043 WASF1Q92558 559 aa12.01□□□□□ -0.49
PHF3-201ENST00000262043 BMP2KQ9NSY1 1161 aaPredicted RBP12.01□□□□□ -0.49
PHF3-201ENST00000262043 SMTNL1A8MU46 457 aa12.01□□□□□ -0.49
PHF3-201ENST00000262043 FILIP1Q7Z7B0 1213 aa12.01□□□□□ -0.49
PHF3-201ENST00000262043 RPAP2Q8IXW5 612 aaPredicted RBP12.01□□□□□ -0.49
PHF3-201ENST00000262043 BOLA2Q9H3K6 86 aa12.01□□□□□ -0.49
PHF3-201ENST00000262043 CEP131Q9UPN4 1083 aa12.01□□□□□ -0.49
PHF3-201ENST00000262043 U3KPZ7 1027 aaPredicted RBP12.01□□□□□ -0.49
PHF3-201ENST00000262043 PTCD1O75127 700 aaKnown RBP12□□□□□ -0.49
PHF3-201ENST00000262043 CIZ1Q9ULV3 898 aaPredicted RBP12□□□□□ -0.49
PHF3-201ENST00000262043 MINDY4BA8MYZ0 360 aa12□□□□□ -0.49
PHF3-201ENST00000262043 MX1P20591 662 aa12□□□□□ -0.49
PHF3-201ENST00000262043 CCDC61Q9Y6R9 512 aa12□□□□□ -0.49
PHF3-201ENST00000262043 HMGXB3Q12766 1538 aa12□□□□□ -0.49
PHF3-201ENST00000262043 NAIPQ13075 1403 aa12□□□□□ -0.49
PHF3-201ENST00000262043 CALRP27797 417 aaKnown RBP12□□□□□ -0.49
PHF3-201ENST00000262043 ZRSR2Q15696 482 aaKnown RBP12□□□□□ -0.49
PHF3-201ENST00000262043 CFAP100Q494V2 611 aa11.99□□□□□ -0.49
PHF3-201ENST00000262043 IQCEQ6IPM2 695 aa11.99□□□□□ -0.49
PHF3-201ENST00000262043 USHBP1Q8N6Y0 703 aa11.99□□□□□ -0.49
PHF3-201ENST00000262043 MYD88Q99836 296 aa11.99□□□□□ -0.49
PHF3-201ENST00000262043 EIF5P55010 431 aaKnown RBP11.99□□□□□ -0.49
PHF3-201ENST00000262043 DCAF8L1A6NGE4 600 aa11.99□□□□□ -0.49
PHF3-201ENST00000262043 EPB41L2O43491 1005 aaKnown RBP11.99□□□□□ -0.49
PHF3-201ENST00000262043 EIF3JO75822 258 aaKnown RBP11.99□□□□□ -0.49
PHF3-201ENST00000262043 AKAP2Q9Y2D5 859 aa11.99□□□□□ -0.49
PHF3-201ENST00000262043 MAGI1Q96QZ7 1491 aaPredicted RBP11.99□□□□□ -0.49
PHF3-201ENST00000262043 TAX1BP1Q86VP1 789 aa11.99□□□□□ -0.49
PHF3-201ENST00000262043 SEC63Q9UGP8 760 aaKnown RBP11.99□□□□□ -0.49
PHF3-201ENST00000262043 POGZQ7Z3K3 1410 aa11.99□□□□□ -0.49
PHF3-201ENST00000262043 ZNF397Q8NF99 534 aaPredicted RBP11.99□□□□□ -0.49
PHF3-201ENST00000262043 SSH1Q8WYL5 1049 aa11.98□□□□□ -0.49
PHF3-201ENST00000262043 GLRX3O76003 335 aaKnown RBP11.98□□□□□ -0.49
PHF3-201ENST00000262043 KIAA0754O94854 1291 aa11.98□□□□□ -0.49
PHF3-201ENST00000262043 C20orf194Q5TEA3 1177 aa11.98□□□□□ -0.49
PHF3-201ENST00000262043 ERLIN1O75477 346 aa11.98□□□□□ -0.49
PHF3-201ENST00000262043 PRPF40BQ6NWY9 871 aaKnown RBP11.98□□□□□ -0.49
PHF3-201ENST00000262043 KCNH5Q8NCM2 988 aa11.98□□□□□ -0.49
PHF3-201ENST00000262043 PLCD4Q9BRC7 762 aa11.98□□□□□ -0.49
PHF3-201ENST00000262043 RARSP54136 660 aaKnown RBP11.97□□□□□ -0.49
PHF3-201ENST00000262043 FERMT3Q86UX7 667 aa11.97□□□□□ -0.49
PHF3-201ENST00000262043 TMOD3Q9NYL9 352 aa11.97□□□□□ -0.49
PHF3-201ENST00000262043 ZNF652Q9Y2D9 606 aa11.97□□□□□ -0.49
PHF3-201ENST00000262043 TAF7Q15545 349 aaPredicted RBP11.97□□□□□ -0.49
PHF3-201ENST00000262043 LARP1Q6PKG0 1096 aaKnown RBP11.97□□□□□ -0.49
PHF3-201ENST00000262043 GUCY1B3Q02153 619 aa11.97□□□□□ -0.49
PHF3-201ENST00000262043 ANKIB1Q9P2G1 1089 aa11.97□□□□□ -0.49
PHF3-201ENST00000262043 GBP2P32456 591 aaPredicted RBP11.97□□□□□ -0.49
PHF3-201ENST00000262043 CAVIN4Q5BKX8 364 aa11.97□□□□□ -0.49
PHF3-201ENST00000262043 DHX37Q8IY37 1157 aaKnown RBP11.97□□□□□ -0.49
PHF3-201ENST00000262043 ALDH1L2Q3SY69 923 aa11.97□□□□□ -0.49
PHF3-201ENST00000262043 SKAP1Q86WV1 359 aa11.97□□□□□ -0.49
PHF3-201ENST00000262043 ANKRD18AQ8IVF6 992 aa11.97□□□□□ -0.49
PHF3-201ENST00000262043 PDIA4P13667 645 aaKnown RBP11.96□□□□□ -0.49
PHF3-201ENST00000262043 MKNK2Q9HBH9 465 aa11.96□□□□□ -0.49
PHF3-201ENST00000262043 F6X3S4 739 aa11.96□□□□□ -0.49
PHF3-201ENST00000262043 SSR1P43307 286 aaKnown RBP11.96□□□□□ -0.49
PHF3-201ENST00000262043 KLHL10Q6JEL2 608 aa11.96□□□□□ -0.49
PHF3-201ENST00000262043 NAPBQ9H115 298 aa11.96□□□□□ -0.49
PHF3-201ENST00000262043 ZPR1O75312 459 aa11.96□□□□□ -0.49
PHF3-201ENST00000262043 IFIT1P09914 478 aaKnown RBP11.96□□□□□ -0.49
PHF3-201ENST00000262043 POLR3DP05423 398 aaPredicted RBP11.96□□□□□ -0.5
PHF3-201ENST00000262043 ZNF287Q9HBT7 754 aa11.96□□□□□ -0.5
PHF3-201ENST00000262043 CCDC183Q5T5S1 534 aa11.95□□□□□ -0.5
PHF3-201ENST00000262043 ESPNB1AK53 854 aa11.95□□□□□ -0.5
PHF3-201ENST00000262043 ARHGAP29Q52LW3 1261 aa11.95□□□□□ -0.5
PHF3-201ENST00000262043 MPRIPQ6WCQ1 1025 aa11.95□□□□□ -0.5
PHF3-201ENST00000262043 CCDC148Q8NFR7 591 aa11.95□□□□□ -0.5
PHF3-201ENST00000262043 CCDC102AQ96A19 550 aa11.95□□□□□ -0.5
PHF3-201ENST00000262043 CCDC8Q9H0W5 538 aaPredicted RBP11.95□□□□□ -0.5
PHF3-201ENST00000262043 C8orf76Q96K31 380 aa11.95□□□□□ -0.5
PHF3-201ENST00000262043 CCDC82Q8N4S0 544 aa11.94□□□□□ -0.5
PHF3-201ENST00000262043 LARP6Q9BRS8 491 aaKnown RBP11.94□□□□□ -0.5
PHF3-201ENST00000262043 CASQ1P31415 396 aa11.94□□□□□ -0.5
PHF3-201ENST00000262043 IFIT5Q13325 482 aaKnown RBP11.94□□□□□ -0.5
PHF3-201ENST00000262043 DZIP1Q86YF9 867 aaKnown RBP11.94□□□□□ -0.5
PHF3-201ENST00000262043 HSP90AB3PQ58FF7 597 aa11.94□□□□□ -0.5
PHF3-201ENST00000262043 NME9Q86XW9 330 aa11.94□□□□□ -0.5
PHF3-201ENST00000262043 JAKMIP3Q5VZ66 844 aa11.93□□□□□ -0.5
PHF3-201ENST00000262043 ZNF213O14771 459 aa11.93□□□□□ -0.5
PHF3-201ENST00000262043 IBSPP21815 317 aaPredicted RBP11.93□□□□□ -0.5
PHF3-201ENST00000262043 TAF3Q5VWG9 929 aa11.93□□□□□ -0.5
PHF3-201ENST00000262043 SETD1BQ9UPS6 1966 aaKnown RBP11.93□□□□□ -0.5
PHF3-201ENST00000262043 LAMC3Q9Y6N6 1575 aa11.93□□□□□ -0.5
PHF3-201ENST00000262043 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.93□□□□□ -0.5
PHF3-201ENST00000262043 ERICH4A6NGS2 130 aa11.93□□□□□ -0.5
PHF3-201ENST00000262043 DESP17661 470 aa11.93□□□□□ -0.5
PHF3-201ENST00000262043 PLEKHH1Q9ULM0 1364 aa11.93□□□□□ -0.5
PHF3-201ENST00000262043 ADGRL1O94910 1474 aa11.93□□□□□ -0.5
PHF3-201ENST00000262043 C11orf95C9JLR9 678 aaPredicted RBP11.93□□□□□ -0.5
PHF3-201ENST00000262043 RANBP6O60518 1105 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 130.8 ms