RNA–Protein interactions for RNA: ENST00000261707.7

SLC6A4-201, Transcript of solute carrier family 6 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A4, Length 6,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-201ENST00000261707 MIA2Q96PC5 1412 aa12.52□□□□□ -0.41
SLC6A4-201ENST00000261707 CCDC171Q6TFL3 1326 aa12.51□□□□□ -0.41
SLC6A4-201ENST00000261707 CLGNO14967 610 aa12.51□□□□□ -0.41
SLC6A4-201ENST00000261707 ERC1Q8IUD2 1116 aa12.51□□□□□ -0.41
SLC6A4-201ENST00000261707 DNAI2Q9GZS0 605 aa12.51□□□□□ -0.41
SLC6A4-201ENST00000261707 DMRT2Q9Y5R5 561 aa12.51□□□□□ -0.41
SLC6A4-201ENST00000261707 BLOC1S2Q6QNY1 142 aa12.51□□□□□ -0.41
SLC6A4-201ENST00000261707 CABP4P57796 275 aa12.51□□□□□ -0.41
SLC6A4-201ENST00000261707 RBM27Q9P2N5 1060 aaKnown RBP12.51□□□□□ -0.41
SLC6A4-201ENST00000261707 C10orf67Q8IYJ2 551 aa12.51□□□□□ -0.41
SLC6A4-201ENST00000261707 ZPR1O75312 459 aa12.51□□□□□ -0.41
SLC6A4-201ENST00000261707 TDRD9Q8NDG6 1382 aaKnown RBP12.5□□□□□ -0.41
SLC6A4-201ENST00000261707 ZNF830Q96NB3 372 aaPredicted RBP12.5□□□□□ -0.41
SLC6A4-201ENST00000261707 SRRTQ9BXP5 876 aaKnown RBP12.5□□□□□ -0.41
SLC6A4-201ENST00000261707 ATP2C2O75185 946 aa12.5□□□□□ -0.41
SLC6A4-201ENST00000261707 OGFRQ9NZT2 677 aa12.5□□□□□ -0.41
SLC6A4-201ENST00000261707 IGSF3O75054 1194 aa12.5□□□□□ -0.41
SLC6A4-201ENST00000261707 CCDC178Q5BJE1 867 aa12.5□□□□□ -0.41
SLC6A4-201ENST00000261707 TMC6Q7Z403 805 aa12.5□□□□□ -0.41
SLC6A4-201ENST00000261707 TRIM22Q8IYM9 498 aa12.5□□□□□ -0.41
SLC6A4-201ENST00000261707 PANK2Q9BZ23 570 aa12.5□□□□□ -0.41
SLC6A4-201ENST00000261707 BAZ1AQ9NRL2 1556 aaPredicted RBP12.5□□□□□ -0.41
SLC6A4-201ENST00000261707 PLEKHH1Q9ULM0 1364 aa12.5□□□□□ -0.41
SLC6A4-201ENST00000261707 KLHL40Q2TBA0 621 aa12.5□□□□□ -0.41
SLC6A4-201ENST00000261707 ANKLE2Q86XL3 938 aa12.5□□□□□ -0.41
SLC6A4-201ENST00000261707 GOLGA6L9A6NEM1 432 aa12.49□□□□□ -0.41
SLC6A4-201ENST00000261707 UBE4AQ14139 1066 aa12.49□□□□□ -0.41
SLC6A4-201ENST00000261707 SKAP1Q86WV1 359 aa12.49□□□□□ -0.41
SLC6A4-201ENST00000261707 NLRP6P59044 892 aa12.49□□□□□ -0.41
SLC6A4-201ENST00000261707 CKAP2LQ8IYA6 745 aa12.49□□□□□ -0.41
SLC6A4-201ENST00000261707 PAFAH1B1P43034 410 aa12.49□□□□□ -0.41
SLC6A4-201ENST00000261707 MSL1Q68DK7 614 aa12.49□□□□□ -0.41
SLC6A4-201ENST00000261707 LRSAM1Q6UWE0 723 aa12.49□□□□□ -0.41
SLC6A4-201ENST00000261707 SRCIN1Q9C0H9 1055 aa12.49□□□□□ -0.41
SLC6A4-201ENST00000261707 CASTP20810 708 aaKnown RBP12.49□□□□□ -0.41
SLC6A4-201ENST00000261707 MAATS1Q7Z4T9 603 aa12.49□□□□□ -0.41
SLC6A4-201ENST00000261707 PNISRQ8TF01 805 aaKnown RBP12.49□□□□□ -0.41
SLC6A4-201ENST00000261707 NOL7Q9UMY1 257 aaKnown RBP12.49□□□□□ -0.41
SLC6A4-201ENST00000261707 TWISTNBQ3B726 338 aaPredicted RBP12.48□□□□□ -0.41
SLC6A4-201ENST00000261707 THEMISQ8N1K5 641 aaPredicted RBP12.48□□□□□ -0.41
SLC6A4-201ENST00000261707 SCAND2PQ9GZW5 306 aaPredicted RBP12.48□□□□□ -0.41
SLC6A4-201ENST00000261707 A0A1B0GUL7 405 aa12.48□□□□□ -0.41
SLC6A4-201ENST00000261707 CTAGE5O15320 804 aa12.48□□□□□ -0.41
SLC6A4-201ENST00000261707 HSF2BPO75031 334 aa12.48□□□□□ -0.41
SLC6A4-201ENST00000261707 CAPN2P17655 700 aa12.48□□□□□ -0.41
SLC6A4-201ENST00000261707 ATF7IPQ6VMQ6 1270 aa12.48□□□□□ -0.41
SLC6A4-201ENST00000261707 CEP57Q86XR8 500 aa12.48□□□□□ -0.41
SLC6A4-201ENST00000261707 TSR2Q969E8 191 aaKnown RBP12.48□□□□□ -0.41
SLC6A4-201ENST00000261707 LIG1P18858 919 aa12.48□□□□□ -0.41
SLC6A4-201ENST00000261707 CCDC30Q5VVM6 783 aa12.48□□□□□ -0.41
SLC6A4-201ENST00000261707 GBP6Q6ZN66 633 aa12.48□□□□□ -0.41
SLC6A4-201ENST00000261707 ARFGAP3Q9NP61 516 aa12.48□□□□□ -0.41
SLC6A4-201ENST00000261707 CPSF2Q9P2I0 782 aaKnown RBP12.48□□□□□ -0.41
SLC6A4-201ENST00000261707 UBAP1LF5GYI3 381 aa12.48□□□□□ -0.41
SLC6A4-201ENST00000261707 BAG4O95429 457 aaKnown RBP12.48□□□□□ -0.41
SLC6A4-201ENST00000261707 DESP17661 470 aa12.48□□□□□ -0.41
SLC6A4-201ENST00000261707 FERMT3Q86UX7 667 aa12.48□□□□□ -0.41
SLC6A4-201ENST00000261707 ZKSCAN5Q9Y2L8 839 aa12.48□□□□□ -0.41
SLC6A4-201ENST00000261707 RAPGEF2Q9Y4G8 1499 aa12.48□□□□□ -0.41
SLC6A4-201ENST00000261707 VGLL3A8MV65 326 aa12.48□□□□□ -0.41
SLC6A4-201ENST00000261707 PRDM11Q9NQV5 511 aa12.48□□□□□ -0.41
SLC6A4-201ENST00000261707 CCDC69A6NI79 296 aa12.47□□□□□ -0.41
SLC6A4-201ENST00000261707 POLD1P28340 1107 aa12.47□□□□□ -0.41
SLC6A4-201ENST00000261707 NBPF8Q3BBV2 869 aa12.47□□□□□ -0.41
SLC6A4-201ENST00000261707 NBPF14Q5TI25 921 aa12.47□□□□□ -0.41
SLC6A4-201ENST00000261707 STAMBPO95630 424 aa12.47□□□□□ -0.41
SLC6A4-201ENST00000261707 SPECC1Q5M775 1068 aa12.47□□□□□ -0.41
SLC6A4-201ENST00000261707 CCDC150Q8NCX0 1101 aa12.47□□□□□ -0.41
SLC6A4-201ENST00000261707 CDKL5O76039 1030 aa12.47□□□□□ -0.41
SLC6A4-201ENST00000261707 SSR1P43307 286 aaKnown RBP12.47□□□□□ -0.41
SLC6A4-201ENST00000261707 SARNPP82979 210 aaKnown RBP12.47□□□□□ -0.41
SLC6A4-201ENST00000261707 CWC27Q6UX04 472 aaKnown RBP12.47□□□□□ -0.41
SLC6A4-201ENST00000261707 STAC3Q96MF2 364 aa12.47□□□□□ -0.41
SLC6A4-201ENST00000261707 ZHX3Q9H4I2 956 aa12.47□□□□□ -0.41
SLC6A4-201ENST00000261707 ZSWIM4Q9H7M6 989 aa12.47□□□□□ -0.41
SLC6A4-201ENST00000261707 KIF20AO95235 890 aa12.46□□□□□ -0.41
SLC6A4-201ENST00000261707 NOP2P46087 812 aaKnown RBP12.46□□□□□ -0.41
SLC6A4-201ENST00000261707 CEP112Q8N8E3 955 aa12.46□□□□□ -0.41
SLC6A4-201ENST00000261707 CCDC12Q8WUD4 166 aaPredicted RBP12.46□□□□□ -0.41
SLC6A4-201ENST00000261707 NAA15Q9BXJ9 866 aaKnown RBP12.46□□□□□ -0.41
SLC6A4-201ENST00000261707 SMARCA2P51531 1590 aa12.46□□□□□ -0.41
SLC6A4-201ENST00000261707 STX1AQ16623 288 aa12.46□□□□□ -0.41
SLC6A4-201ENST00000261707 NUP88Q99567 741 aaPredicted RBP12.46□□□□□ -0.41
SLC6A4-201ENST00000261707 USO1O60763 962 aaKnown RBP12.46□□□□□ -0.41
SLC6A4-201ENST00000261707 FEZ1Q99689 392 aa12.46□□□□□ -0.41
SLC6A4-201ENST00000261707 HLTFQ14527 1009 aaKnown RBP eCLIP12.46□□□□□ -0.42
SLC6A4-201ENST00000261707 C6orf163Q5TEZ5 329 aa12.46□□□□□ -0.42
SLC6A4-201ENST00000261707 DDX19AQ9NUU7 478 aaKnown RBP12.46□□□□□ -0.42
SLC6A4-201ENST00000261707 ZNF76P36508 570 aa12.46□□□□□ -0.42
SLC6A4-201ENST00000261707 MTHFSP49914 203 aa12.45□□□□□ -0.42
SLC6A4-201ENST00000261707 GNG11P61952 73 aa12.45□□□□□ -0.42
SLC6A4-201ENST00000261707 CPLX3Q8WVH0 158 aa12.45□□□□□ -0.42
SLC6A4-201ENST00000261707 CCDC184Q52MB2 194 aa12.45□□□□□ -0.42
SLC6A4-201ENST00000261707 YEATS4O95619 227 aa12.45□□□□□ -0.42
SLC6A4-201ENST00000261707 PPM1EQ8WY54 764 aa12.45□□□□□ -0.42
SLC6A4-201ENST00000261707 TTC39AQ5SRH9 613 aa12.45□□□□□ -0.42
SLC6A4-201ENST00000261707 WDR66Q8TBY9 1149 aa12.45□□□□□ -0.42
SLC6A4-201ENST00000261707 DNA2P51530 1060 aa12.45□□□□□ -0.42
SLC6A4-201ENST00000261707 MCM6Q14566 821 aa12.45□□□□□ -0.42
SLC6A4-201ENST00000261707 CCDC57Q2TAC2 916 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms