RNA–Protein interactions for RNA: ENST00000261667.7

KPNA3-201, Transcript of karyopherin subunit alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA3, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA3-201ENST00000261667 BRMS1Q9HCU9 246 aa12.56□□□□□ -0.4
KPNA3-201ENST00000261667 ARFGAP3Q9NP61 516 aa12.56□□□□□ -0.4
KPNA3-201ENST00000261667 DIP2BQ9P265 1576 aa12.55□□□□□ -0.4
KPNA3-201ENST00000261667 SLU7O95391 586 aaKnown RBP12.55□□□□□ -0.4
KPNA3-201ENST00000261667 U2AF1L5P0DN76 240 aaPredicted RBP12.55□□□□□ -0.4
KPNA3-201ENST00000261667 NAP1L1P55209 391 aaKnown RBP12.55□□□□□ -0.4
KPNA3-201ENST00000261667 U2AF1Q01081 240 aaKnown RBP eCLIP12.55□□□□□ -0.4
KPNA3-201ENST00000261667 UVSSAQ2YD98 709 aa12.55□□□□□ -0.4
KPNA3-201ENST00000261667 SDF4Q9BRK5 362 aa12.55□□□□□ -0.4
KPNA3-201ENST00000261667 C17orf53Q8N3J3 647 aaPredicted RBP12.55□□□□□ -0.4
KPNA3-201ENST00000261667 CEP83Q9Y592 693 aa12.55□□□□□ -0.4
KPNA3-201ENST00000261667 MORC1Q86VD1 984 aa12.55□□□□□ -0.4
KPNA3-201ENST00000261667 BRD4O60885 1362 aaPredicted RBP12.55□□□□□ -0.4
KPNA3-201ENST00000261667 WDR63Q8IWG1 891 aa12.54□□□□□ -0.4
KPNA3-201ENST00000261667 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.54□□□□□ -0.4
KPNA3-201ENST00000261667 HCLS1P14317 486 aaPredicted RBP12.54□□□□□ -0.4
KPNA3-201ENST00000261667 GCKP35557 465 aa12.54□□□□□ -0.4
KPNA3-201ENST00000261667 MCM6Q14566 821 aa12.54□□□□□ -0.4
KPNA3-201ENST00000261667 EFCAB2Q5VUJ9 269 aa12.54□□□□□ -0.4
KPNA3-201ENST00000261667 CLIP2Q9UDT6 1046 aa12.54□□□□□ -0.4
KPNA3-201ENST00000261667 CCDC172P0C7W6 258 aa12.54□□□□□ -0.4
KPNA3-201ENST00000261667 RGS22Q8NE09 1264 aa12.54□□□□□ -0.4
KPNA3-201ENST00000261667 NEK11Q8NG66 645 aa12.54□□□□□ -0.4
KPNA3-201ENST00000261667 PIBF1Q8WXW3 757 aa12.54□□□□□ -0.4
KPNA3-201ENST00000261667 WDR33Q9C0J8 1336 aaKnown RBP12.54□□□□□ -0.4
KPNA3-201ENST00000261667 FSD2A1L4K1 749 aa12.54□□□□□ -0.4
KPNA3-201ENST00000261667 CCDC183Q5T5S1 534 aa12.54□□□□□ -0.4
KPNA3-201ENST00000261667 ANKRD18AQ8IVF6 992 aa12.54□□□□□ -0.4
KPNA3-201ENST00000261667 ADGRL1O94910 1474 aa12.54□□□□□ -0.4
KPNA3-201ENST00000261667 EBAG9O00559 213 aa12.53□□□□□ -0.4
KPNA3-201ENST00000261667 TET3O43151 1660 aa12.53□□□□□ -0.4
KPNA3-201ENST00000261667 BCAR3O75815 825 aa12.53□□□□□ -0.4
KPNA3-201ENST00000261667 RBSNQ9H1K0 784 aa12.53□□□□□ -0.4
KPNA3-201ENST00000261667 PDE3AQ14432 1141 aa12.53□□□□□ -0.4
KPNA3-201ENST00000261667 ABCA6Q8N139 1617 aa12.53□□□□□ -0.4
KPNA3-201ENST00000261667 MCM2P49736 904 aa12.52□□□□□ -0.4
KPNA3-201ENST00000261667 DHX8Q14562 1220 aaKnown RBP12.52□□□□□ -0.4
KPNA3-201ENST00000261667 PPP1R9BQ96SB3 815 aa12.52□□□□□ -0.4
KPNA3-201ENST00000261667 VPS18Q9P253 973 aa12.52□□□□□ -0.4
KPNA3-201ENST00000261667 ZSCAN20P17040 1043 aaPredicted RBP12.52□□□□□ -0.41
KPNA3-201ENST00000261667 SNW1Q13573 536 aaKnown RBP12.52□□□□□ -0.41
KPNA3-201ENST00000261667 ARHGAP29Q52LW3 1261 aa12.52□□□□□ -0.41
KPNA3-201ENST00000261667 LUZP1Q86V48 1076 aa12.52□□□□□ -0.41
KPNA3-201ENST00000261667 NEO1Q92859 1461 aa12.52□□□□□ -0.41
KPNA3-201ENST00000261667 KIF13AQ9H1H9 1805 aa12.52□□□□□ -0.41
KPNA3-201ENST00000261667 HECW2Q9P2P5 1572 aa12.52□□□□□ -0.41
KPNA3-201ENST00000261667 ERBB4Q15303 1308 aa12.52□□□□□ -0.41
KPNA3-201ENST00000261667 POGZQ7Z3K3 1410 aa12.51□□□□□ -0.41
KPNA3-201ENST00000261667 NCAPGQ9BPX3 1015 aa12.51□□□□□ -0.41
KPNA3-201ENST00000261667 NUP62CLQ9H1M0 184 aa12.51□□□□□ -0.41
KPNA3-201ENST00000261667 UHRF1BP1Q6BDS2 1440 aa12.51□□□□□ -0.41
KPNA3-201ENST00000261667 SFPQP23246 707 aaKnown RBP eCLIP12.51□□□□□ -0.41
KPNA3-201ENST00000261667 CCDC186Q7Z3E2 898 aa12.51□□□□□ -0.41
KPNA3-201ENST00000261667 MLH3Q9UHC1 1453 aa12.51□□□□□ -0.41
KPNA3-201ENST00000261667 RBBP5Q15291 538 aaKnown RBP12.51□□□□□ -0.41
KPNA3-201ENST00000261667 NBPF8Q3BBV2 869 aa12.51□□□□□ -0.41
KPNA3-201ENST00000261667 NGEFQ8N5V2 710 aa12.51□□□□□ -0.41
KPNA3-201ENST00000261667 CEP152O94986 1710 aa12.51□□□□□ -0.41
KPNA3-201ENST00000261667 SPHKAPQ2M3C7 1700 aa12.51□□□□□ -0.41
KPNA3-201ENST00000261667 NEURL4Q96JN8 1562 aa12.51□□□□□ -0.41
KPNA3-201ENST00000261667 RSRC1Q96IZ7 334 aaKnown RBP12.51□□□□□ -0.41
KPNA3-201ENST00000261667 ST20-MTHFSA0A0A6YYL1 179 aa12.5□□□□□ -0.41
KPNA3-201ENST00000261667 MAP3K11Q16584 847 aa12.5□□□□□ -0.41
KPNA3-201ENST00000261667 ZNF518AQ6AHZ1 1483 aa12.5□□□□□ -0.41
KPNA3-201ENST00000261667 KINO60870 393 aaKnown RBP12.5□□□□□ -0.41
KPNA3-201ENST00000261667 ZRSR2Q15696 482 aaKnown RBP12.5□□□□□ -0.41
KPNA3-201ENST00000261667 SPATS2LQ9NUQ6 558 aaKnown RBP12.5□□□□□ -0.41
KPNA3-201ENST00000261667 SART3Q15020 963 aaKnown RBP12.5□□□□□ -0.41
KPNA3-201ENST00000261667 OTUD6BQ8N6M0 293 aa12.5□□□□□ -0.41
KPNA3-201ENST00000261667 LMTK2Q8IWU2 1503 aa12.49□□□□□ -0.41
KPNA3-201ENST00000261667 SPATA31E1Q6ZUB1 1445 aa12.49□□□□□ -0.41
KPNA3-201ENST00000261667 CCDC171Q6TFL3 1326 aa12.49□□□□□ -0.41
KPNA3-201ENST00000261667 NEMFO60524 1076 aa12.49□□□□□ -0.41
KPNA3-201ENST00000261667 PEX19P40855 299 aa12.49□□□□□ -0.41
KPNA3-201ENST00000261667 HNRNPH2P55795 449 aaKnown RBP12.49□□□□□ -0.41
KPNA3-201ENST00000261667 ATP2B3Q16720 1220 aa12.49□□□□□ -0.41
KPNA3-201ENST00000261667 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.49□□□□□ -0.41
KPNA3-201ENST00000261667 RAI14Q9P0K7 980 aa12.49□□□□□ -0.41
KPNA3-201ENST00000261667 SCLT1Q96NL6 688 aa12.49□□□□□ -0.41
KPNA3-201ENST00000261667 CD109Q6YHK3 1445 aa12.49□□□□□ -0.41
KPNA3-201ENST00000261667 PHACTR2O75167 634 aa12.49□□□□□ -0.41
KPNA3-201ENST00000261667 GDPD2Q9HCC8 539 aa12.49□□□□□ -0.41
KPNA3-201ENST00000261667 SCAPERQ9BY12 1400 aa12.48□□□□□ -0.41
KPNA3-201ENST00000261667 KIF4AO95239 1232 aa12.48□□□□□ -0.41
KPNA3-201ENST00000261667 CAMK4Q16566 473 aa12.48□□□□□ -0.41
KPNA3-201ENST00000261667 ZMYM4Q5VZL5 1548 aa12.48□□□□□ -0.41
KPNA3-201ENST00000261667 CASTP20810 708 aaKnown RBP12.48□□□□□ -0.41
KPNA3-201ENST00000261667 ODF2Q5BJF6 829 aa12.48□□□□□ -0.41
KPNA3-201ENST00000261667 ZSWIM4Q9H7M6 989 aa12.48□□□□□ -0.41
KPNA3-201ENST00000261667 ERLIN2O94905 339 aa12.47□□□□□ -0.41
KPNA3-201ENST00000261667 SERPINC1P01008 464 aa12.47□□□□□ -0.41
KPNA3-201ENST00000261667 MLECQ14165 292 aa12.47□□□□□ -0.41
KPNA3-201ENST00000261667 GAS2L3Q86XJ1 694 aa12.47□□□□□ -0.41
KPNA3-201ENST00000261667 DNAJC21Q5F1R6 531 aaKnown RBP12.47□□□□□ -0.41
KPNA3-201ENST00000261667 NBPF11Q86T75 865 aa12.47□□□□□ -0.41
KPNA3-201ENST00000261667 ERC1Q8IUD2 1116 aa12.47□□□□□ -0.41
KPNA3-201ENST00000261667 ERO1AQ96HE7 468 aa12.47□□□□□ -0.41
KPNA3-201ENST00000261667 TRPM2O94759 1503 aa12.47□□□□□ -0.41
KPNA3-201ENST00000261667 TRPM1Q7Z4N2 1603 aa12.47□□□□□ -0.41
KPNA3-201ENST00000261667 DIP2CQ9Y2E4 1556 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms