RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 KDM3BQ7LBC6 1761 aa24.04■■□□□ 1.44
COL4A3BP-201ENST00000261415 MPRIPQ6WCQ1 1025 aa24.03■■□□□ 1.44
COL4A3BP-201ENST00000261415 PHKG2P15735 406 aa24.02■■□□□ 1.44
COL4A3BP-201ENST00000261415 UNC5CLQ8IV45 518 aa24.02■■□□□ 1.44
COL4A3BP-201ENST00000261415 LGR6Q9HBX8 967 aa24.02■■□□□ 1.44
COL4A3BP-201ENST00000261415 SPATA31A1Q5TZJ5 1347 aa24.02■■□□□ 1.44
COL4A3BP-201ENST00000261415 EXOSC9Q06265 439 aaKnown RBP24.01■■□□□ 1.43
COL4A3BP-201ENST00000261415 IFNL2Q8IZJ0 200 aa24.01■■□□□ 1.43
COL4A3BP-201ENST00000261415 FNBP4Q8N3X1 1017 aaPredicted RBP24.01■■□□□ 1.43
COL4A3BP-201ENST00000261415 CHL1O00533 1208 aa24.01■■□□□ 1.43
COL4A3BP-201ENST00000261415 CYP27B1O15528 508 aa24.01■■□□□ 1.43
COL4A3BP-201ENST00000261415 ZCRB1Q8TBF4 217 aaKnown RBP24.01■■□□□ 1.43
COL4A3BP-201ENST00000261415 KDM6AO15550 1401 aaPredicted RBP24■■□□□ 1.43
COL4A3BP-201ENST00000261415 PCDH11XQ9BZA7 1347 aa24■■□□□ 1.43
COL4A3BP-201ENST00000261415 PCDH11YQ9BZA8 1340 aa24■■□□□ 1.43
COL4A3BP-201ENST00000261415 SPATA31A5Q5VU36 1347 aa24■■□□□ 1.43
COL4A3BP-201ENST00000261415 SPATA31A7Q8IWB4 1347 aa24■■□□□ 1.43
COL4A3BP-201ENST00000261415 MEX3CQ5U5Q3 659 aaKnown RBP24■■□□□ 1.43
COL4A3BP-201ENST00000261415 RNMTO43148 476 aaKnown RBP23.99■■□□□ 1.43
COL4A3BP-201ENST00000261415 THRAP3Q9Y2W1 955 aaKnown RBP23.98■■□□□ 1.43
COL4A3BP-201ENST00000261415 MIS18AQ9NYP9 233 aa23.96■■□□□ 1.43
COL4A3BP-201ENST00000261415 CCDC9Q9Y3X0 531 aaKnown RBP23.96■■□□□ 1.43
COL4A3BP-201ENST00000261415 TOGARAM1Q9Y4F4 1720 aa23.96■■□□□ 1.43
COL4A3BP-201ENST00000261415 CT47B1P0C2W7 299 aaPredicted RBP23.96■■□□□ 1.43
COL4A3BP-201ENST00000261415 TAF7Q15545 349 aaPredicted RBP23.96■■□□□ 1.43
COL4A3BP-201ENST00000261415 TSPYL4Q9UJ04 414 aa23.96■■□□□ 1.43
COL4A3BP-201ENST00000261415 USP21Q9UK80 565 aa23.96■■□□□ 1.43
COL4A3BP-201ENST00000261415 MRC1P22897 1456 aa23.96■■□□□ 1.43
COL4A3BP-201ENST00000261415 TEFQ10587 303 aa23.95■■□□□ 1.43
COL4A3BP-201ENST00000261415 HSP90AA1P07900 732 aaKnown RBP23.95■■□□□ 1.42
COL4A3BP-201ENST00000261415 HSP90AB1P08238 724 aaKnown RBP23.95■■□□□ 1.42
COL4A3BP-201ENST00000261415 VPS72Q15906 364 aa23.95■■□□□ 1.42
COL4A3BP-201ENST00000261415 TNS2Q63HR2 1409 aa23.94■■□□□ 1.42
COL4A3BP-201ENST00000261415 ITGB4P16144 1822 aa23.94■■□□□ 1.42
COL4A3BP-201ENST00000261415 KAT6BQ8WYB5 2073 aa23.94■■□□□ 1.42
COL4A3BP-201ENST00000261415 DCAF5Q96JK2 942 aa23.94■■□□□ 1.42
COL4A3BP-201ENST00000261415 BABAM1Q9NWV8 329 aa23.94■■□□□ 1.42
COL4A3BP-201ENST00000261415 CDCA7Q9BWT1 371 aaPredicted RBP23.93■■□□□ 1.42
COL4A3BP-201ENST00000261415 RRP1P56182 461 aaKnown RBP23.93■■□□□ 1.42
COL4A3BP-201ENST00000261415 AFF2P51816 1311 aa23.92■■□□□ 1.42
COL4A3BP-201ENST00000261415 DDX54Q8TDD1 881 aaKnown RBP23.92■■□□□ 1.42
COL4A3BP-201ENST00000261415 RARSP54136 660 aaKnown RBP23.91■■□□□ 1.42
COL4A3BP-201ENST00000261415 BARGINQ6ZT62 677 aa23.91■■□□□ 1.42
COL4A3BP-201ENST00000261415 TSPYL6Q8N831 410 aa23.91■■□□□ 1.42
COL4A3BP-201ENST00000261415 C8orf58Q8NAV2 365 aa23.91■■□□□ 1.42
COL4A3BP-201ENST00000261415 BCAR3O75815 825 aa23.9■■□□□ 1.42
COL4A3BP-201ENST00000261415 GLI3P10071 1580 aa23.9■■□□□ 1.42
COL4A3BP-201ENST00000261415 NKX1-1Q15270 411 aaPredicted RBP23.9■■□□□ 1.42
COL4A3BP-201ENST00000261415 TWISTNBQ3B726 338 aaPredicted RBP23.9■■□□□ 1.42
COL4A3BP-201ENST00000261415 CACNA1FO60840 1977 aa23.89■■□□□ 1.41
COL4A3BP-201ENST00000261415 ELL2O00472 640 aaPredicted RBP23.89■■□□□ 1.41
COL4A3BP-201ENST00000261415 KRT24Q2M2I5 525 aa23.89■■□□□ 1.41
COL4A3BP-201ENST00000261415 SLC52A2Q9HAB3 445 aa23.89■■□□□ 1.41
COL4A3BP-201ENST00000261415 THSD7AQ9UPZ6 1657 aa23.88■■□□□ 1.41
COL4A3BP-201ENST00000261415 DOT1LQ8TEK3 1739 aa23.88■■□□□ 1.41
COL4A3BP-201ENST00000261415 BTBD11A6QL63 1104 aa23.88■■□□□ 1.41
COL4A3BP-201ENST00000261415 EXOC5O00471 708 aa23.88■■□□□ 1.41
COL4A3BP-201ENST00000261415 VAMP4O75379 141 aa23.88■■□□□ 1.41
COL4A3BP-201ENST00000261415 FBXO41Q8TF61 875 aa23.87■■□□□ 1.41
COL4A3BP-201ENST00000261415 PAPPAQ13219 1627 aa23.86■■□□□ 1.41
COL4A3BP-201ENST00000261415 ZNF428Q96B54 188 aa23.86■■□□□ 1.41
COL4A3BP-201ENST00000261415 BCL2L13Q9BXK5 485 aa23.86■■□□□ 1.41
COL4A3BP-201ENST00000261415 RRAGDQ9NQL2 400 aaPredicted RBP23.86■■□□□ 1.41
COL4A3BP-201ENST00000261415 ATRNO75882 1429 aa23.86■■□□□ 1.41
COL4A3BP-201ENST00000261415 PLIN1O60240 522 aa23.86■■□□□ 1.41
COL4A3BP-201ENST00000261415 DDB1Q16531 1140 aa23.86■■□□□ 1.41
COL4A3BP-201ENST00000261415 FAM98CQ17RN3 349 aaKnown RBP23.85■■□□□ 1.41
COL4A3BP-201ENST00000261415 NFATC2IPQ8NCF5 419 aa23.85■■□□□ 1.41
COL4A3BP-201ENST00000261415 UBR2Q8IWV8 1755 aa23.85■■□□□ 1.41
COL4A3BP-201ENST00000261415 L1TD1Q5T7N2 865 aaKnown RBP23.85■■□□□ 1.41
COL4A3BP-201ENST00000261415 SSH1Q8WYL5 1049 aa23.84■■□□□ 1.41
COL4A3BP-201ENST00000261415 ALDH1L2Q3SY69 923 aa23.83■■□□□ 1.41
COL4A3BP-201ENST00000261415 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.83■■□□□ 1.41
COL4A3BP-201ENST00000261415 NAP1L5Q96NT1 182 aaPredicted RBP23.83■■□□□ 1.41
COL4A3BP-201ENST00000261415 SMC4Q9NTJ3 1288 aa23.83■■□□□ 1.41
COL4A3BP-201ENST00000261415 C5P01031 1676 aa23.83■■□□□ 1.4
COL4A3BP-201ENST00000261415 ERVV-2B6SEH9 535 aa23.82■■□□□ 1.4
COL4A3BP-201ENST00000261415 KCNQ3O43525 872 aa23.82■■□□□ 1.4
COL4A3BP-201ENST00000261415 CABP4P57796 275 aa23.82■■□□□ 1.4
COL4A3BP-201ENST00000261415 EIF4A1P60842 406 aaKnown RBP23.81■■□□□ 1.4
COL4A3BP-201ENST00000261415 TRPC5Q9UL62 973 aaPredicted RBP23.81■■□□□ 1.4
COL4A3BP-201ENST00000261415 GJD4Q96KN9 370 aaPredicted RBP23.81■■□□□ 1.4
COL4A3BP-201ENST00000261415 ZNF790Q6PG37 636 aa23.79■■□□□ 1.4
COL4A3BP-201ENST00000261415 SOS1Q07889 1333 aaPredicted RBP23.78■■□□□ 1.4
COL4A3BP-201ENST00000261415 SLC39A6Q13433 755 aa23.78■■□□□ 1.4
COL4A3BP-201ENST00000261415 CLCN1P35523 988 aa23.77■■□□□ 1.4
COL4A3BP-201ENST00000261415 LAMB4A4D0S4 1761 aa23.77■■□□□ 1.4
COL4A3BP-201ENST00000261415 FRAT2O75474 233 aaPredicted RBP23.77■■□□□ 1.4
COL4A3BP-201ENST00000261415 CANXP27824 592 aaKnown RBP23.77■■□□□ 1.4
COL4A3BP-201ENST00000261415 HEG1Q9ULI3 1381 aa23.77■■□□□ 1.39
COL4A3BP-201ENST00000261415 MARCH10Q8NA82 808 aaPredicted RBP23.76■■□□□ 1.39
COL4A3BP-201ENST00000261415 BRPF1P55201 1214 aaPredicted RBP23.76■■□□□ 1.39
COL4A3BP-201ENST00000261415 A0A0G2JS52 829 aa23.75■■□□□ 1.39
COL4A3BP-201ENST00000261415 C20orf194Q5TEA3 1177 aa23.75■■□□□ 1.39
COL4A3BP-201ENST00000261415 MRPL50Q8N5N7 158 aaKnown RBP23.75■■□□□ 1.39
COL4A3BP-201ENST00000261415 KIF16BQ96L93 1317 aa23.75■■□□□ 1.39
COL4A3BP-201ENST00000261415 BRWD3Q6RI45 1802 aa23.75■■□□□ 1.39
COL4A3BP-201ENST00000261415 QTRT2Q9H974 415 aaKnown RBP23.75■■□□□ 1.39
COL4A3BP-201ENST00000261415 HOXB7P09629 217 aa23.74■■□□□ 1.39
COL4A3BP-201ENST00000261415 TTC5Q8N0Z6 440 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms