RNA–Protein interactions for RNA: ENST00000261367.11

SNCAIP-201, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-201ENST00000261367 BANK1Q8NDB2 785 aa9.76□□□□□ -0.85
SNCAIP-201ENST00000261367 RASSF8Q8NHQ8 419 aa9.76□□□□□ -0.85
SNCAIP-201ENST00000261367 CENPHQ9H3R5 247 aa9.76□□□□□ -0.85
SNCAIP-201ENST00000261367 LRRFIP2Q9Y608 721 aaKnown RBP9.76□□□□□ -0.85
SNCAIP-201ENST00000261367 DHX16O60231 1041 aaKnown RBP9.76□□□□□ -0.85
SNCAIP-201ENST00000261367 PPP2R1AP30153 589 aa9.76□□□□□ -0.85
SNCAIP-201ENST00000261367 BMP2KLQ5H9B9 411 aa9.76□□□□□ -0.85
SNCAIP-201ENST00000261367 BCL2L13Q9BXK5 485 aa9.76□□□□□ -0.85
SNCAIP-201ENST00000261367 SH2B1Q9NRF2 756 aaPredicted RBP9.76□□□□□ -0.85
SNCAIP-201ENST00000261367 CTCFLQ8NI51 663 aaPredicted RBP9.76□□□□□ -0.85
SNCAIP-201ENST00000261367 RSRC1Q96IZ7 334 aaKnown RBP9.76□□□□□ -0.85
SNCAIP-201ENST00000261367 C16orf45Q96MC5 204 aaPredicted RBP9.76□□□□□ -0.85
SNCAIP-201ENST00000261367 ATP6V1AP38606 617 aa9.76□□□□□ -0.85
SNCAIP-201ENST00000261367 SRPK2P78362 688 aaKnown RBP9.76□□□□□ -0.85
SNCAIP-201ENST00000261367 SAFBQ15424 915 aaKnown RBP eCLIP9.76□□□□□ -0.85
SNCAIP-201ENST00000261367 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.76□□□□□ -0.85
SNCAIP-201ENST00000261367 WWC1Q8IX03 1113 aa9.75□□□□□ -0.85
SNCAIP-201ENST00000261367 PLCD3Q8N3E9 789 aa9.75□□□□□ -0.85
SNCAIP-201ENST00000261367 SPATA32Q96LK8 384 aa9.75□□□□□ -0.85
SNCAIP-201ENST00000261367 FSD2A1L4K1 749 aa9.75□□□□□ -0.85
SNCAIP-201ENST00000261367 EBAG9O00559 213 aa9.75□□□□□ -0.85
SNCAIP-201ENST00000261367 CPLX1O14810 134 aa9.75□□□□□ -0.85
SNCAIP-201ENST00000261367 CHMP3Q9Y3E7 222 aa9.75□□□□□ -0.85
SNCAIP-201ENST00000261367 CYP46A1Q9Y6A2 500 aa9.75□□□□□ -0.85
SNCAIP-201ENST00000261367 IBTKQ9P2D0 1353 aaPredicted RBP9.75□□□□□ -0.85
SNCAIP-201ENST00000261367 HSPA4P34932 840 aa9.75□□□□□ -0.85
SNCAIP-201ENST00000261367 CEP112Q8N8E3 955 aa9.75□□□□□ -0.85
SNCAIP-201ENST00000261367 PCMTD1Q96MG8 357 aaPredicted RBP9.75□□□□□ -0.85
SNCAIP-201ENST00000261367 RALGAPBQ86X10 1494 aa9.75□□□□□ -0.85
SNCAIP-201ENST00000261367 URI1O94763 535 aaPredicted RBP9.74□□□□□ -0.85
SNCAIP-201ENST00000261367 CCDC181Q5TID7 509 aa9.74□□□□□ -0.85
SNCAIP-201ENST00000261367 ATF7IPQ6VMQ6 1270 aa9.74□□□□□ -0.85
SNCAIP-201ENST00000261367 PHF23Q9BUL5 403 aaPredicted RBP9.74□□□□□ -0.85
SNCAIP-201ENST00000261367 MAP2K2P36507 400 aa9.74□□□□□ -0.85
SNCAIP-201ENST00000261367 TMX4Q9H1E5 349 aaPredicted RBP9.74□□□□□ -0.85
SNCAIP-201ENST00000261367 CCDC141Q6ZP82 1450 aa9.74□□□□□ -0.85
SNCAIP-201ENST00000261367 TMCO5BA8MYB1 307 aa9.74□□□□□ -0.85
SNCAIP-201ENST00000261367 ATP8B1O43520 1251 aa9.74□□□□□ -0.85
SNCAIP-201ENST00000261367 GNAI3P08754 354 aa9.74□□□□□ -0.85
SNCAIP-201ENST00000261367 AKAP17AQ02040 695 aaKnown RBP9.74□□□□□ -0.85
SNCAIP-201ENST00000261367 STX1AQ16623 288 aa9.74□□□□□ -0.85
SNCAIP-201ENST00000261367 B4GALNT4Q76KP1 1039 aa9.74□□□□□ -0.85
SNCAIP-201ENST00000261367 FAM200AQ8TCP9 573 aa9.74□□□□□ -0.85
SNCAIP-201ENST00000261367 MPHOSPH10O00566 681 aaKnown RBP9.73□□□□□ -0.85
SNCAIP-201ENST00000261367 OPA1O60313 960 aa9.73□□□□□ -0.85
SNCAIP-201ENST00000261367 MX1P20591 662 aa9.73□□□□□ -0.85
SNCAIP-201ENST00000261367 ARHGAP29Q52LW3 1261 aa9.73□□□□□ -0.85
SNCAIP-201ENST00000261367 SPATS2Q86XZ4 545 aaKnown RBP9.73□□□□□ -0.85
SNCAIP-201ENST00000261367 TRERF1Q96PN7 1200 aa9.73□□□□□ -0.85
SNCAIP-201ENST00000261367 PLCD4Q9BRC7 762 aa9.73□□□□□ -0.85
SNCAIP-201ENST00000261367 DEPDC5O75140 1603 aa9.73□□□□□ -0.85
SNCAIP-201ENST00000261367 CAPN2P17655 700 aa9.73□□□□□ -0.85
SNCAIP-201ENST00000261367 HNRNPMP52272 730 aaKnown RBP eCLIP9.73□□□□□ -0.85
SNCAIP-201ENST00000261367 IMMTQ16891 758 aaKnown RBP9.73□□□□□ -0.85
SNCAIP-201ENST00000261367 SPECC1LQ69YQ0 1117 aa9.73□□□□□ -0.85
SNCAIP-201ENST00000261367 ABCC1P33527 1531 aa9.72□□□□□ -0.85
SNCAIP-201ENST00000261367 EPB41L2O43491 1005 aaKnown RBP9.72□□□□□ -0.85
SNCAIP-201ENST00000261367 KIF1CO43896 1103 aaKnown RBP9.72□□□□□ -0.85
SNCAIP-201ENST00000261367 EIF5P55010 431 aaKnown RBP9.72□□□□□ -0.85
SNCAIP-201ENST00000261367 RPAP2Q8IXW5 612 aaPredicted RBP9.72□□□□□ -0.85
SNCAIP-201ENST00000261367 MICALL1Q8N3F8 863 aa9.72□□□□□ -0.85
SNCAIP-201ENST00000261367 EHBP1Q8NDI1 1231 aa9.72□□□□□ -0.85
SNCAIP-201ENST00000261367 WDR66Q8TBY9 1149 aa9.72□□□□□ -0.85
SNCAIP-201ENST00000261367 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.72□□□□□ -0.85
SNCAIP-201ENST00000261367 IFIT2P09913 472 aaKnown RBP9.72□□□□□ -0.85
SNCAIP-201ENST00000261367 C10orf67Q8IYJ2 551 aa9.72□□□□□ -0.85
SNCAIP-201ENST00000261367 TACO1Q9BSH4 297 aaKnown RBP9.72□□□□□ -0.85
SNCAIP-201ENST00000261367 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.72□□□□□ -0.85
SNCAIP-201ENST00000261367 RRP7AQ9Y3A4 280 aaKnown RBP9.72□□□□□ -0.85
SNCAIP-201ENST00000261367 UHRF1BP1LA0JNW5 1464 aa9.72□□□□□ -0.85
SNCAIP-201ENST00000261367 LRCH2Q5VUJ6 765 aa9.72□□□□□ -0.85
SNCAIP-201ENST00000261367 SLC4A10Q6U841 1118 aa9.72□□□□□ -0.85
SNCAIP-201ENST00000261367 SWAP70Q9UH65 585 aa9.72□□□□□ -0.85
SNCAIP-201ENST00000261367 RNF17Q9BXT8 1623 aaKnown RBP9.72□□□□□ -0.85
SNCAIP-201ENST00000261367 CKAP4Q07065 602 aaKnown RBP9.72□□□□□ -0.85
SNCAIP-201ENST00000261367 KRBA2Q6ZNG9 492 aa9.72□□□□□ -0.85
SNCAIP-201ENST00000261367 MIPOL1Q8TD10 442 aa9.72□□□□□ -0.85
SNCAIP-201ENST00000261367 KIF3BO15066 747 aa9.71□□□□□ -0.85
SNCAIP-201ENST00000261367 HDGFP51858 240 aaKnown RBP9.71□□□□□ -0.85
SNCAIP-201ENST00000261367 HDAC1Q13547 482 aaPredicted RBP9.71□□□□□ -0.85
SNCAIP-201ENST00000261367 KRT32Q14532 448 aa9.71□□□□□ -0.85
SNCAIP-201ENST00000261367 STK38Q15208 465 aa9.71□□□□□ -0.85
SNCAIP-201ENST00000261367 LARP1BQ659C4 914 aaKnown RBP9.71□□□□□ -0.85
SNCAIP-201ENST00000261367 GOLGA1Q92805 767 aa9.71□□□□□ -0.85
SNCAIP-201ENST00000261367 RSPH14Q9UHP6 348 aa9.71□□□□□ -0.85
SNCAIP-201ENST00000261367 ABCC11Q96J66 1382 aa9.71□□□□□ -0.85
SNCAIP-201ENST00000261367 CCDC27Q2M243 656 aa9.71□□□□□ -0.85
SNCAIP-201ENST00000261367 LAMC1P11047 1609 aa9.71□□□□□ -0.86
SNCAIP-201ENST00000261367 HDXQ7Z353 690 aa9.71□□□□□ -0.86
SNCAIP-201ENST00000261367 MAGEC2Q9UBF1 373 aaPredicted RBP9.71□□□□□ -0.86
SNCAIP-201ENST00000261367 CCDC9Q9Y3X0 531 aaKnown RBP9.71□□□□□ -0.86
SNCAIP-201ENST00000261367 EVC2Q86UK5 1308 aa9.71□□□□□ -0.86
SNCAIP-201ENST00000261367 VGFO15240 615 aaPredicted RBP9.71□□□□□ -0.86
SNCAIP-201ENST00000261367 ANKRD18AQ8IVF6 992 aa9.71□□□□□ -0.86
SNCAIP-201ENST00000261367 DIAPH1O60610 1272 aaKnown RBP9.7□□□□□ -0.86
SNCAIP-201ENST00000261367 BCAR3O75815 825 aa9.7□□□□□ -0.86
SNCAIP-201ENST00000261367 ARHGAP25P42331 645 aa9.7□□□□□ -0.86
SNCAIP-201ENST00000261367 RIPK4P57078 832 aa9.7□□□□□ -0.86
SNCAIP-201ENST00000261367 MRVI1Q9Y6F6 885 aa9.7□□□□□ -0.86
SNCAIP-201ENST00000261367 MROH1Q8NDA8 1641 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms