RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 MAP4K4O95819 1239 aaPredicted RBP19.33■□□□□ 0.68
LMNB1-201ENST00000261366 TERF1P54274 439 aa19.33■□□□□ 0.68
LMNB1-201ENST00000261366 KIAA2012Q0VF49 1180 aa19.33■□□□□ 0.68
LMNB1-201ENST00000261366 BRD1O95696 1058 aa19.32■□□□□ 0.68
LMNB1-201ENST00000261366 ZHX1Q9UKY1 873 aaPredicted RBP19.32■□□□□ 0.68
LMNB1-201ENST00000261366 USP48Q86UV5 1035 aa19.31■□□□□ 0.68
LMNB1-201ENST00000261366 COG3Q96JB2 828 aa19.31■□□□□ 0.68
LMNB1-201ENST00000261366 DYNC1I1O14576 645 aa19.31■□□□□ 0.68
LMNB1-201ENST00000261366 REREQ9P2R6 1566 aa19.3■□□□□ 0.68
LMNB1-201ENST00000261366 MAP7D2Q96T17 732 aa19.3■□□□□ 0.68
LMNB1-201ENST00000261366 ESYT1Q9BSJ8 1104 aa19.3■□□□□ 0.68
LMNB1-201ENST00000261366 HMMRO75330 724 aa19.29■□□□□ 0.68
LMNB1-201ENST00000261366 HCLS1P14317 486 aaPredicted RBP19.29■□□□□ 0.68
LMNB1-201ENST00000261366 METP08581 1390 aa19.29■□□□□ 0.68
LMNB1-201ENST00000261366 UNC5CLQ8IV45 518 aa19.29■□□□□ 0.68
LMNB1-201ENST00000261366 PRDM4Q9UKN5 801 aa19.29■□□□□ 0.68
LMNB1-201ENST00000261366 SPATA31D1Q6ZQQ2 1576 aa19.28■□□□□ 0.68
LMNB1-201ENST00000261366 FOXO3O43524 673 aa19.28■□□□□ 0.68
LMNB1-201ENST00000261366 IL1RAPL2Q9NP60 686 aa19.28■□□□□ 0.68
LMNB1-201ENST00000261366 MAP2P11137 1827 aaKnown RBP19.27■□□□□ 0.68
LMNB1-201ENST00000261366 MCCP23508 829 aa19.27■□□□□ 0.68
LMNB1-201ENST00000261366 SYAP1Q96A49 352 aaPredicted RBP19.27■□□□□ 0.68
LMNB1-201ENST00000261366 CNPY2Q9Y2B0 182 aa19.27■□□□□ 0.68
LMNB1-201ENST00000261366 ARHGEF40Q8TER5 1519 aa19.27■□□□□ 0.68
LMNB1-201ENST00000261366 MCM5P33992 734 aa19.27■□□□□ 0.68
LMNB1-201ENST00000261366 CEBPAP49715 358 aaPredicted RBP19.27■□□□□ 0.68
LMNB1-201ENST00000261366 IL25Q9H293 177 aa19.27■□□□□ 0.68
LMNB1-201ENST00000261366 RGS12O14924 1447 aa19.26■□□□□ 0.67
LMNB1-201ENST00000261366 FIBPO43427 364 aa19.26■□□□□ 0.67
LMNB1-201ENST00000261366 ADCY5O95622 1261 aa19.26■□□□□ 0.67
LMNB1-201ENST00000261366 PNMA6EA0A0J9YXQ4 647 aa19.25■□□□□ 0.67
LMNB1-201ENST00000261366 MX1P20591 662 aa19.25■□□□□ 0.67
LMNB1-201ENST00000261366 CBX1P83916 185 aa19.25■□□□□ 0.67
LMNB1-201ENST00000261366 CHMLP26374 656 aa19.24■□□□□ 0.67
LMNB1-201ENST00000261366 SRCIN1Q9C0H9 1055 aa19.24■□□□□ 0.67
LMNB1-201ENST00000261366 CHMP3Q9Y3E7 222 aa19.24■□□□□ 0.67
LMNB1-201ENST00000261366 WASLO00401 505 aaPredicted RBP19.23■□□□□ 0.67
LMNB1-201ENST00000261366 EIF4A2Q14240 407 aaKnown RBP19.23■□□□□ 0.67
LMNB1-201ENST00000261366 NOLC1Q14978 699 aaKnown RBP eCLIP19.23■□□□□ 0.67
LMNB1-201ENST00000261366 NUTM1Q86Y26 1132 aa19.23■□□□□ 0.67
LMNB1-201ENST00000261366 LRRCC1Q9C099 1032 aa19.23■□□□□ 0.67
LMNB1-201ENST00000261366 KIF13AQ9H1H9 1805 aa19.23■□□□□ 0.67
LMNB1-201ENST00000261366 CHL1O00533 1208 aa19.23■□□□□ 0.67
LMNB1-201ENST00000261366 SPC24Q8NBT2 197 aa19.23■□□□□ 0.67
LMNB1-201ENST00000261366 BCL11BQ9C0K0 894 aaPredicted RBP19.23■□□□□ 0.67
LMNB1-201ENST00000261366 CPA1P15085 419 aa19.22■□□□□ 0.67
LMNB1-201ENST00000261366 TNRQ92752 1358 aa19.22■□□□□ 0.67
LMNB1-201ENST00000261366 HDGFP51858 240 aaKnown RBP19.22■□□□□ 0.67
LMNB1-201ENST00000261366 CUL4AQ13619 759 aa19.22■□□□□ 0.67
LMNB1-201ENST00000261366 HSP90AB2PQ58FF8 381 aa19.22■□□□□ 0.67
LMNB1-201ENST00000261366 TSPYL4Q9UJ04 414 aa19.22■□□□□ 0.67
LMNB1-201ENST00000261366 ANKRD26Q9UPS8 1709 aa19.22■□□□□ 0.67
LMNB1-201ENST00000261366 GIMAP6Q6P9H5 292 aa19.22■□□□□ 0.67
LMNB1-201ENST00000261366 DDX54Q8TDD1 881 aaKnown RBP19.22■□□□□ 0.67
LMNB1-201ENST00000261366 GNAI2P04899 355 aa19.21■□□□□ 0.67
LMNB1-201ENST00000261366 FKBP5Q13451 457 aaPredicted RBP19.21■□□□□ 0.67
LMNB1-201ENST00000261366 MCM2P49736 904 aa19.21■□□□□ 0.67
LMNB1-201ENST00000261366 PHF14O94880 888 aa19.2■□□□□ 0.66
LMNB1-201ENST00000261366 MYRIPQ8NFW9 859 aa19.2■□□□□ 0.66
LMNB1-201ENST00000261366 NUDT16Q96DE0 195 aaKnown RBP19.2■□□□□ 0.66
LMNB1-201ENST00000261366 KIF24Q5T7B8 1368 aa19.2■□□□□ 0.66
LMNB1-201ENST00000261366 PTPRCP08575 1304 aa19.2■□□□□ 0.66
LMNB1-201ENST00000261366 DLG5Q8TDM6 1919 aa19.2■□□□□ 0.66
LMNB1-201ENST00000261366 KIF20BQ96Q89 1820 aa19.19■□□□□ 0.66
LMNB1-201ENST00000261366 SPDYE4A6NLX3 237 aa19.19■□□□□ 0.66
LMNB1-201ENST00000261366 ZNF710Q8N1W2 664 aa19.19■□□□□ 0.66
LMNB1-201ENST00000261366 WDR33Q9C0J8 1336 aaKnown RBP19.19■□□□□ 0.66
LMNB1-201ENST00000261366 CDC42BPGQ6DT37 1551 aa19.19■□□□□ 0.66
LMNB1-201ENST00000261366 LRRFIP2Q9Y608 721 aaKnown RBP19.18■□□□□ 0.66
LMNB1-201ENST00000261366 PIBF1Q8WXW3 757 aa19.18■□□□□ 0.66
LMNB1-201ENST00000261366 CCDC94Q9BW85 323 aaPredicted RBP19.18■□□□□ 0.66
LMNB1-201ENST00000261366 LTKP29376 864 aa19.18■□□□□ 0.66
LMNB1-201ENST00000261366 OSBPL3Q9H4L5 887 aa19.18■□□□□ 0.66
LMNB1-201ENST00000261366 MTERF4Q7Z6M4 381 aaKnown RBP19.17■□□□□ 0.66
LMNB1-201ENST00000261366 SLC26A8Q96RN1 970 aa19.17■□□□□ 0.66
LMNB1-201ENST00000261366 HAP1P54257 671 aaPredicted RBP19.17■□□□□ 0.66
LMNB1-201ENST00000261366 PPP4R3BQ5MIZ7 849 aa19.17■□□□□ 0.66
LMNB1-201ENST00000261366 TMEM2Q9UHN6 1383 aa19.16■□□□□ 0.66
LMNB1-201ENST00000261366 TCHHQ07283 1943 aa19.16■□□□□ 0.66
LMNB1-201ENST00000261366 IGSF3O75054 1194 aa19.16■□□□□ 0.66
LMNB1-201ENST00000261366 CCDC183Q5T5S1 534 aa19.16■□□□□ 0.66
LMNB1-201ENST00000261366 RTF1Q92541 710 aaKnown RBP19.16■□□□□ 0.66
LMNB1-201ENST00000261366 INTS4Q96HW7 963 aaKnown RBP19.16■□□□□ 0.66
LMNB1-201ENST00000261366 CCDC61Q9Y6R9 512 aa19.16■□□□□ 0.66
LMNB1-201ENST00000261366 STK31Q9BXU1 1019 aa19.15■□□□□ 0.66
LMNB1-201ENST00000261366 SPG7Q9UQ90 795 aa19.15■□□□□ 0.66
LMNB1-201ENST00000261366 CCT4P50991 539 aaKnown RBP19.15■□□□□ 0.66
LMNB1-201ENST00000261366 SMAP1Q8IYB5 467 aaPredicted RBP19.15■□□□□ 0.66
LMNB1-201ENST00000261366 DLC1Q96QB1 1528 aa19.14■□□□□ 0.66
LMNB1-201ENST00000261366 SYT1P21579 422 aa19.14■□□□□ 0.65
LMNB1-201ENST00000261366 CDK12Q9NYV4 1490 aaPredicted RBP19.14■□□□□ 0.65
LMNB1-201ENST00000261366 AP5Z1O43299 807 aa19.14■□□□□ 0.65
LMNB1-201ENST00000261366 AK2P54819 239 aa19.14■□□□□ 0.65
LMNB1-201ENST00000261366 RASEFQ8IZ41 740 aa19.14■□□□□ 0.65
LMNB1-201ENST00000261366 PYCARDQ9ULZ3 195 aa19.14■□□□□ 0.65
LMNB1-201ENST00000261366 KIF3AQ9Y496 699 aa19.14■□□□□ 0.65
LMNB1-201ENST00000261366 CPS1P31327 1500 aa19.13■□□□□ 0.65
LMNB1-201ENST00000261366 ATP2B3Q16720 1220 aa19.13■□□□□ 0.65
LMNB1-201ENST00000261366 CWC27Q6UX04 472 aaKnown RBP19.13■□□□□ 0.65
LMNB1-201ENST00000261366 EDC4Q6P2E9 1401 aaKnown RBP19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms