RNA–Protein interactions for RNA: ENST00000259631.4

CCL27-201, Transcript of C-C motif chemokine ligand 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL27, Length 446 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL27-201ENST00000259631 ARXQ96QS3 562 aa13.25□□□□□ -0.29
CCL27-201ENST00000259631 RGPD3A6NKT7 1758 aaPredicted RBP13.25□□□□□ -0.29
CCL27-201ENST00000259631 RGPD4Q7Z3J3 1758 aa13.25□□□□□ -0.29
CCL27-201ENST00000259631 SHANK3Q9BYB0 1731 aa13.25□□□□□ -0.29
CCL27-201ENST00000259631 KDRP35968 1356 aa13.24□□□□□ -0.29
CCL27-201ENST00000259631 GNPATO15228 680 aa13.24□□□□□ -0.29
CCL27-201ENST00000259631 RNMTO43148 476 aaKnown RBP13.24□□□□□ -0.29
CCL27-201ENST00000259631 PTGER2P43116 358 aa13.24□□□□□ -0.29
CCL27-201ENST00000259631 GAS2L2Q8NHY3 880 aa13.24□□□□□ -0.29
CCL27-201ENST00000259631 CCER2I3L3R5 266 aa13.23□□□□□ -0.29
CCL27-201ENST00000259631 TEFQ10587 303 aa13.23□□□□□ -0.29
CCL27-201ENST00000259631 ITPK1Q13572 414 aa13.23□□□□□ -0.29
CCL27-201ENST00000259631 RALBP1Q15311 655 aa13.23□□□□□ -0.29
CCL27-201ENST00000259631 LINC00116Q8NCU8 138 aa13.23□□□□□ -0.29
CCL27-201ENST00000259631 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.22□□□□□ -0.29
CCL27-201ENST00000259631 GNAT3A8MTJ3 354 aa13.22□□□□□ -0.29
CCL27-201ENST00000259631 RTF1Q92541 710 aaKnown RBP13.22□□□□□ -0.29
CCL27-201ENST00000259631 PHACTR3Q96KR7 559 aa13.22□□□□□ -0.29
CCL27-201ENST00000259631 FHDC1Q9C0D6 1143 aaPredicted RBP13.22□□□□□ -0.29
CCL27-201ENST00000259631 SLC52A2Q9HAB3 445 aa13.22□□□□□ -0.29
CCL27-201ENST00000259631 PKD1L3Q7Z443 1732 aa13.22□□□□□ -0.29
CCL27-201ENST00000259631 SLC39A6Q13433 755 aa13.21□□□□□ -0.29
CCL27-201ENST00000259631 TRAPPC3LQ5T215 181 aa13.21□□□□□ -0.29
CCL27-201ENST00000259631 PELP1Q8IZL8 1130 aaKnown RBP13.21□□□□□ -0.29
CCL27-201ENST00000259631 PRKRIP1Q9H875 184 aaPredicted RBP13.21□□□□□ -0.29
CCL27-201ENST00000259631 RTCBQ9Y3I0 505 aaKnown RBP13.21□□□□□ -0.29
CCL27-201ENST00000259631 KDM6AO15550 1401 aaPredicted RBP13.21□□□□□ -0.3
CCL27-201ENST00000259631 LRP5O75197 1615 aa13.21□□□□□ -0.3
CCL27-201ENST00000259631 PLEKHG2Q9H7P9 1386 aa13.2□□□□□ -0.3
CCL27-201ENST00000259631 FCHSD2O94868 740 aa13.2□□□□□ -0.3
CCL27-201ENST00000259631 RSPH6AQ9H0K4 717 aa13.2□□□□□ -0.3
CCL27-201ENST00000259631 TTC5Q8N0Z6 440 aa13.19□□□□□ -0.3
CCL27-201ENST00000259631 IL17REQ8NFR9 667 aa13.19□□□□□ -0.3
CCL27-201ENST00000259631 SYT17Q9BSW7 474 aa13.19□□□□□ -0.3
CCL27-201ENST00000259631 ITGB4P16144 1822 aa13.18□□□□□ -0.3
CCL27-201ENST00000259631 RFC4P35249 363 aa13.18□□□□□ -0.3
CCL27-201ENST00000259631 MIER1Q8N108 512 aa13.18□□□□□ -0.3
CCL27-201ENST00000259631 SLC4A9Q96Q91 983 aa13.18□□□□□ -0.3
CCL27-201ENST00000259631 PNNQ9H307 717 aaKnown RBP13.18□□□□□ -0.3
CCL27-201ENST00000259631 MYBBP1AQ9BQG0 1328 aaKnown RBP13.17□□□□□ -0.3
CCL27-201ENST00000259631 TOGARAM1Q9Y4F4 1720 aa13.17□□□□□ -0.3
CCL27-201ENST00000259631 SSFA2P28290 1259 aa13.17□□□□□ -0.3
CCL27-201ENST00000259631 AMIGO3Q86WK7 504 aa13.17□□□□□ -0.3
CCL27-201ENST00000259631 DNAJC10Q8IXB1 793 aa13.17□□□□□ -0.3
CCL27-201ENST00000259631 MAP3K5Q99683 1374 aa13.17□□□□□ -0.3
CCL27-201ENST00000259631 RPS6KA4O75676 772 aa13.16□□□□□ -0.3
CCL27-201ENST00000259631 GPR162Q16538 588 aa13.16□□□□□ -0.3
CCL27-201ENST00000259631 RC3H1Q5TC82 1133 aaKnown RBP13.16□□□□□ -0.3
CCL27-201ENST00000259631 MCM10Q7L590 875 aa13.16□□□□□ -0.3
CCL27-201ENST00000259631 ARHGEF1Q92888 912 aaKnown RBP13.16□□□□□ -0.3
CCL27-201ENST00000259631 SGIP1Q9BQI5 828 aa13.16□□□□□ -0.3
CCL27-201ENST00000259631 LY75O60449 1722 aa13.16□□□□□ -0.3
CCL27-201ENST00000259631 COL3A1P02461 1466 aaPredicted RBP13.16□□□□□ -0.3
CCL27-201ENST00000259631 MAPK8IP3Q9UPT6 1336 aa13.15□□□□□ -0.3
CCL27-201ENST00000259631 BTBD11A6QL63 1104 aa13.15□□□□□ -0.3
CCL27-201ENST00000259631 CRKLP46109 303 aaKnown RBP13.15□□□□□ -0.3
CCL27-201ENST00000259631 DCTN1Q14203 1278 aa13.15□□□□□ -0.3
CCL27-201ENST00000259631 CASZ1Q86V15 1759 aa13.15□□□□□ -0.31
CCL27-201ENST00000259631 PAPPAQ13219 1627 aa13.14□□□□□ -0.31
CCL27-201ENST00000259631 CANXP27824 592 aaKnown RBP13.14□□□□□ -0.31
CCL27-201ENST00000259631 WDR43Q15061 677 aaKnown RBP eCLIP13.14□□□□□ -0.31
CCL27-201ENST00000259631 NPM2Q86SE8 214 aaKnown RBP13.14□□□□□ -0.31
CCL27-201ENST00000259631 ZNF330Q9Y3S2 320 aaPredicted RBP13.14□□□□□ -0.31
CCL27-201ENST00000259631 STARD3NLO95772 234 aa13.13□□□□□ -0.31
CCL27-201ENST00000259631 NLGN1Q8N2Q7 840 aa13.13□□□□□ -0.31
CCL27-201ENST00000259631 CCDC87Q9NVE4 849 aa13.13□□□□□ -0.31
CCL27-201ENST00000259631 CNTNAP4Q9C0A0 1308 aa13.13□□□□□ -0.31
CCL27-201ENST00000259631 ZPR1O75312 459 aa13.12□□□□□ -0.31
CCL27-201ENST00000259631 INTS5Q6P9B9 1019 aaKnown RBP13.12□□□□□ -0.31
CCL27-201ENST00000259631 ZNF790Q6PG37 636 aa13.12□□□□□ -0.31
CCL27-201ENST00000259631 C4BP0C0L5 1744 aa13.11□□□□□ -0.31
CCL27-201ENST00000259631 KCNQ3O43525 872 aa13.11□□□□□ -0.31
CCL27-201ENST00000259631 MMP10P09238 476 aa13.11□□□□□ -0.31
CCL27-201ENST00000259631 CYP19A1P11511 503 aaPredicted RBP13.11□□□□□ -0.31
CCL27-201ENST00000259631 ADRA2BP18089 450 aa13.11□□□□□ -0.31
CCL27-201ENST00000259631 ZNF496Q96IT1 587 aaPredicted RBP13.11□□□□□ -0.31
CCL27-201ENST00000259631 FMNL2Q96PY5 1086 aa13.11□□□□□ -0.31
CCL27-201ENST00000259631 MIS18AQ9NYP9 233 aa13.11□□□□□ -0.31
CCL27-201ENST00000259631 SRP68Q9UHB9 627 aaKnown RBP13.11□□□□□ -0.31
CCL27-201ENST00000259631 WWC3Q9ULE0 1092 aa13.11□□□□□ -0.31
CCL27-201ENST00000259631 C5P01031 1676 aa13.11□□□□□ -0.31
CCL27-201ENST00000259631 HTATSF1O43719 755 aaKnown RBP13.1□□□□□ -0.31
CCL27-201ENST00000259631 TAF7Q15545 349 aaPredicted RBP13.1□□□□□ -0.31
CCL27-201ENST00000259631 NEUROD2Q15784 382 aa13.1□□□□□ -0.31
CCL27-201ENST00000259631 NFE2L2Q16236 605 aa13.1□□□□□ -0.31
CCL27-201ENST00000259631 CCDC146Q8IYE0 955 aa13.1□□□□□ -0.31
CCL27-201ENST00000259631 NLGN2Q8NFZ4 835 aa13.1□□□□□ -0.31
CCL27-201ENST00000259631 TEX13AQ9BXU3 409 aaPredicted RBP13.1□□□□□ -0.31
CCL27-201ENST00000259631 PARP3Q9Y6F1 533 aa13.1□□□□□ -0.31
CCL27-201ENST00000259631 SRCAPQ6ZRS2 3230 aa13.09□□□□□ -0.31
CCL27-201ENST00000259631 YY1P25490 414 aa13.09□□□□□ -0.31
CCL27-201ENST00000259631 RIPK4P57078 832 aa13.09□□□□□ -0.31
CCL27-201ENST00000259631 VSIG10Q8N0Z9 540 aa13.09□□□□□ -0.31
CCL27-201ENST00000259631 CD2APQ9Y5K6 639 aa13.09□□□□□ -0.31
CCL27-201ENST00000259631 PLEKHF1Q96S99 279 aa13.08□□□□□ -0.32
CCL27-201ENST00000259631 THUMPD2Q9BTF0 503 aaKnown RBP13.08□□□□□ -0.32
CCL27-201ENST00000259631 RRP7AQ9Y3A4 280 aaKnown RBP13.08□□□□□ -0.32
CCL27-201ENST00000259631 A1BGP04217 495 aa13.07□□□□□ -0.32
CCL27-201ENST00000259631 GYS1P13807 737 aa13.07□□□□□ -0.32
CCL27-201ENST00000259631 USPL1Q5W0Q7 1092 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms