RNA–Protein interactions for RNA: ENST00000259043.11

TRA2B-201, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-201ENST00000259043 F11P03951 625 aa10.57□□□□□ -0.72
TRA2B-201ENST00000259043 PHTF2Q8N3S3 785 aa10.57□□□□□ -0.72
TRA2B-201ENST00000259043 NUCKS1Q9H1E3 243 aaKnown RBP10.57□□□□□ -0.72
TRA2B-201ENST00000259043 TIMMDC1Q9NPL8 285 aa10.57□□□□□ -0.72
TRA2B-201ENST00000259043 OIP5O43482 229 aa10.56□□□□□ -0.72
TRA2B-201ENST00000259043 TAS1R3Q7RTX0 852 aa10.56□□□□□ -0.72
TRA2B-201ENST00000259043 WASLO00401 505 aaPredicted RBP10.55□□□□□ -0.72
TRA2B-201ENST00000259043 PROCP04070 461 aa10.55□□□□□ -0.72
TRA2B-201ENST00000259043 UBTFP17480 764 aaKnown RBP10.55□□□□□ -0.72
TRA2B-201ENST00000259043 SCTRP47872 440 aa10.55□□□□□ -0.72
TRA2B-201ENST00000259043 CCDC85AQ96PX6 553 aaPredicted RBP10.55□□□□□ -0.72
TRA2B-201ENST00000259043 TRAK2O60296 914 aa10.54□□□□□ -0.72
TRA2B-201ENST00000259043 MAP2K3P46734 347 aa10.54□□□□□ -0.72
TRA2B-201ENST00000259043 GALNT6Q8NCL4 622 aa10.54□□□□□ -0.72
TRA2B-201ENST00000259043 CFHR5Q9BXR6 569 aa10.54□□□□□ -0.72
TRA2B-201ENST00000259043 OXCT2Q9BYC2 517 aaPredicted RBP10.54□□□□□ -0.72
TRA2B-201ENST00000259043 ESF1Q9H501 851 aaKnown RBP10.54□□□□□ -0.72
TRA2B-201ENST00000259043 ARHGEF10LQ9HCE6 1279 aa10.54□□□□□ -0.72
TRA2B-201ENST00000259043 CHIC2Q9UKJ5 165 aa10.54□□□□□ -0.72
TRA2B-201ENST00000259043 OSBPL3Q9H4L5 887 aa10.53□□□□□ -0.72
TRA2B-201ENST00000259043 PCDHB11Q9Y5F2 797 aa10.53□□□□□ -0.72
TRA2B-201ENST00000259043 TSGA10IPQ3SY00 556 aa10.52□□□□□ -0.73
TRA2B-201ENST00000259043 CDCA7Q9BWT1 371 aaPredicted RBP10.52□□□□□ -0.73
TRA2B-201ENST00000259043 RAD21O60216 631 aa10.51□□□□□ -0.73
TRA2B-201ENST00000259043 SOX11P35716 441 aa10.51□□□□□ -0.73
TRA2B-201ENST00000259043 GNRH1P01148 92 aa10.5□□□□□ -0.73
TRA2B-201ENST00000259043 XP32Q5T750 250 aa10.5□□□□□ -0.73
TRA2B-201ENST00000259043 ALG2Q9H553 416 aa10.5□□□□□ -0.73
TRA2B-201ENST00000259043 CLUAP1Q96AJ1 413 aa10.49□□□□□ -0.73
TRA2B-201ENST00000259043 ESYT1Q9BSJ8 1104 aa10.49□□□□□ -0.73
TRA2B-201ENST00000259043 PHF24Q9UPV7 400 aa10.49□□□□□ -0.73
TRA2B-201ENST00000259043 THBS1P07996 1170 aa10.48□□□□□ -0.73
TRA2B-201ENST00000259043 SNRPNP63162 240 aaKnown RBP10.48□□□□□ -0.73
TRA2B-201ENST00000259043 ALYREFQ86V81 257 aaKnown RBP10.48□□□□□ -0.73
TRA2B-201ENST00000259043 FNBP4Q8N3X1 1017 aaPredicted RBP10.48□□□□□ -0.73
TRA2B-201ENST00000259043 CNKSR1Q969H4 720 aa10.48□□□□□ -0.73
TRA2B-201ENST00000259043 RAB6BQ9NRW1 208 aa10.48□□□□□ -0.73
TRA2B-201ENST00000259043 MKL2Q9ULH7 1088 aa10.48□□□□□ -0.73
TRA2B-201ENST00000259043 A0A1B0GTH6 734 aa10.47□□□□□ -0.73
TRA2B-201ENST00000259043 POM121CA8CG34 1229 aa10.47□□□□□ -0.73
TRA2B-201ENST00000259043 CENPCQ03188 943 aa10.47□□□□□ -0.73
TRA2B-201ENST00000259043 SEMA3FQ13275 785 aa10.47□□□□□ -0.73
TRA2B-201ENST00000259043 SLFNL1Q499Z3 407 aa10.47□□□□□ -0.73
TRA2B-201ENST00000259043 ADAMTS19Q8TE59 1207 aa10.47□□□□□ -0.73
TRA2B-201ENST00000259043 KLRG1Q96E93 195 aa10.47□□□□□ -0.73
TRA2B-201ENST00000259043 GPAMQ9HCL2 828 aa10.47□□□□□ -0.73
TRA2B-201ENST00000259043 GDF2Q9UK05 429 aaPredicted RBP10.47□□□□□ -0.73
TRA2B-201ENST00000259043 SHISA8B8ZZ34 492 aa10.46□□□□□ -0.73
TRA2B-201ENST00000259043 IL2RAP01589 272 aa10.46□□□□□ -0.73
TRA2B-201ENST00000259043 LBRQ14739 615 aaKnown RBP10.46□□□□□ -0.73
TRA2B-201ENST00000259043 RNF135Q8IUD6 432 aa10.46□□□□□ -0.73
TRA2B-201ENST00000259043 KRBA1A5PL33 1030 aa10.45□□□□□ -0.74
TRA2B-201ENST00000259043 K7ELQ4 463 aaPredicted RBP10.45□□□□□ -0.74
TRA2B-201ENST00000259043 ZSCAN10Q96SZ4 725 aaPredicted RBP10.45□□□□□ -0.74
TRA2B-201ENST00000259043 DOLKQ9UPQ8 538 aa10.45□□□□□ -0.74
TRA2B-201ENST00000259043 PIK3CDO00329 1044 aa10.44□□□□□ -0.74
TRA2B-201ENST00000259043 PHKA2P46019 1235 aa10.44□□□□□ -0.74
TRA2B-201ENST00000259043 C1orf229Q6ZS94 237 aaPredicted RBP10.44□□□□□ -0.74
TRA2B-201ENST00000259043 WWC1Q8IX03 1113 aa10.44□□□□□ -0.74
TRA2B-201ENST00000259043 HRH3Q9Y5N1 445 aa10.44□□□□□ -0.74
TRA2B-201ENST00000259043 MYCP01106 439 aaPredicted RBP10.43□□□□□ -0.74
TRA2B-201ENST00000259043 CSB-PGBD3P0DP91 1061 aa10.43□□□□□ -0.74
TRA2B-201ENST00000259043 GTF2E1P29083 439 aaPredicted RBP10.43□□□□□ -0.74
TRA2B-201ENST00000259043 GNASQ5JWF2 1037 aa10.43□□□□□ -0.74
TRA2B-201ENST00000259043 PGBD3Q8N328 593 aa10.43□□□□□ -0.74
TRA2B-201ENST00000259043 GOLGA6L1Q8N7Z2 621 aa10.43□□□□□ -0.74
TRA2B-201ENST00000259043 EDARADDQ8WWZ3 215 aa10.43□□□□□ -0.74
TRA2B-201ENST00000259043 RRAGCQ9HB90 399 aa10.43□□□□□ -0.74
TRA2B-201ENST00000259043 BAG6P46379 1132 aa10.42□□□□□ -0.74
TRA2B-201ENST00000259043 UBAP2LQ14157 1087 aaKnown RBP10.42□□□□□ -0.74
TRA2B-201ENST00000259043 PROSER2Q86WR7 435 aaPredicted RBP10.42□□□□□ -0.74
TRA2B-201ENST00000259043 PLPP7Q8NBV4 271 aa10.42□□□□□ -0.74
TRA2B-201ENST00000259043 XAGE2Q96GT9 111 aa10.42□□□□□ -0.74
TRA2B-201ENST00000259043 A6NJR5 290 aa10.41□□□□□ -0.74
TRA2B-201ENST00000259043 COL8A1P27658 744 aa10.41□□□□□ -0.74
TRA2B-201ENST00000259043 MAP7D1Q3KQU3 841 aa10.41□□□□□ -0.74
TRA2B-201ENST00000259043 TMEM214Q6NUQ4 689 aaKnown RBP10.41□□□□□ -0.74
TRA2B-201ENST00000259043 ATXN7L1Q9ULK2 861 aaPredicted RBP10.41□□□□□ -0.74
TRA2B-201ENST00000259043 USP4Q13107 963 aa10.4□□□□□ -0.74
TRA2B-201ENST00000259043 FHDC1Q9C0D6 1143 aaPredicted RBP10.4□□□□□ -0.74
TRA2B-201ENST00000259043 BMP4P12644 408 aa10.39□□□□□ -0.75
TRA2B-201ENST00000259043 C4orf17Q53FE4 359 aa10.39□□□□□ -0.75
TRA2B-201ENST00000259043 OXLD1Q5BKU9 147 aa10.39□□□□□ -0.75
TRA2B-201ENST00000259043 ESCO1Q5FWF5 840 aa10.39□□□□□ -0.75
TRA2B-201ENST00000259043 EFHC2Q5JST6 749 aa10.39□□□□□ -0.75
TRA2B-201ENST00000259043 RUBCNLQ9H714 662 aa10.39□□□□□ -0.75
TRA2B-201ENST00000259043 MSX1P28360 303 aa10.38□□□□□ -0.75
TRA2B-201ENST00000259043 NFATC2IPQ8NCF5 419 aa10.38□□□□□ -0.75
TRA2B-201ENST00000259043 UCN2Q96RP3 112 aa10.38□□□□□ -0.75
TRA2B-201ENST00000259043 PIK3R2O00459 728 aa10.37□□□□□ -0.75
TRA2B-201ENST00000259043 HDGFL1Q5TGJ6 251 aa10.37□□□□□ -0.75
TRA2B-201ENST00000259043 LINC00114Q6XXX2 140 aa10.37□□□□□ -0.75
TRA2B-201ENST00000259043 SLCO4C1Q6ZQN7 724 aa10.37□□□□□ -0.75
TRA2B-201ENST00000259043 C2CD2LO14523 706 aa10.36□□□□□ -0.75
TRA2B-201ENST00000259043 HOXB4P17483 251 aaPredicted RBP10.36□□□□□ -0.75
TRA2B-201ENST00000259043 FGFR3P22607 806 aa10.36□□□□□ -0.75
TRA2B-201ENST00000259043 AMPD1P23109 780 aa10.36□□□□□ -0.75
TRA2B-201ENST00000259043 ABHD17AQ96GS6 310 aa10.36□□□□□ -0.75
TRA2B-201ENST00000259043 NDFIP2Q9NV92 336 aa10.36□□□□□ -0.75
TRA2B-201ENST00000259043 GGA1Q9UJY5 639 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms