RNA–Protein interactions for RNA: ENST00000258888.5

ALPK3-201, Transcript of alpha kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALPK3, Length 10,917 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3-201ENST00000258888 TBC1D2Q9BYX2 928 aa15.74■□□□□ 0.11
ALPK3-201ENST00000258888 SFPQP23246 707 aaKnown RBP eCLIP15.74■□□□□ 0.11
ALPK3-201ENST00000258888 RBM5P52756 815 aaKnown RBP eCLIP15.74■□□□□ 0.11
ALPK3-201ENST00000258888 EIF5P55010 431 aaKnown RBP15.74■□□□□ 0.11
ALPK3-201ENST00000258888 WASF1Q92558 559 aa15.74■□□□□ 0.11
ALPK3-201ENST00000258888 CCDC102AQ96A19 550 aa15.74■□□□□ 0.11
ALPK3-201ENST00000258888 IQGAP2Q13576 1575 aa15.74■□□□□ 0.11
ALPK3-201ENST00000258888 SMTNL1A8MU46 457 aa15.74■□□□□ 0.11
ALPK3-201ENST00000258888 U3KPZ7 1027 aaPredicted RBP15.74■□□□□ 0.11
ALPK3-201ENST00000258888 LRPPRCP42704 1394 aaKnown RBP15.73■□□□□ 0.11
ALPK3-201ENST00000258888 ENOX2Q16206 610 aaKnown RBP15.73■□□□□ 0.11
ALPK3-201ENST00000258888 IQCEQ6IPM2 695 aa15.73■□□□□ 0.11
ALPK3-201ENST00000258888 GLRX3O76003 335 aaKnown RBP15.73■□□□□ 0.11
ALPK3-201ENST00000258888 ABCC11Q96J66 1382 aa15.73■□□□□ 0.11
ALPK3-201ENST00000258888 RRP9O43818 475 aaKnown RBP15.73■□□□□ 0.11
ALPK3-201ENST00000258888 PLCD4Q9BRC7 762 aa15.73■□□□□ 0.11
ALPK3-201ENST00000258888 BOLA2Q9H3K6 86 aa15.73■□□□□ 0.11
ALPK3-201ENST00000258888 F6X3S4 739 aa15.73■□□□□ 0.11
ALPK3-201ENST00000258888 PDCL2Q8N4E4 241 aa15.73■□□□□ 0.11
ALPK3-201ENST00000258888 TNPO1Q92973 898 aaKnown RBP15.73■□□□□ 0.11
ALPK3-201ENST00000258888 TAX1BP1Q86VP1 789 aa15.73■□□□□ 0.11
ALPK3-201ENST00000258888 ALDH1L2Q3SY69 923 aa15.72■□□□□ 0.11
ALPK3-201ENST00000258888 DHX37Q8IY37 1157 aaKnown RBP15.72■□□□□ 0.11
ALPK3-201ENST00000258888 USHBP1Q8N6Y0 703 aa15.72■□□□□ 0.11
ALPK3-201ENST00000258888 HSP90AB3PQ58FF7 597 aa15.72■□□□□ 0.11
ALPK3-201ENST00000258888 METTL24Q5JXM2 366 aa15.72■□□□□ 0.11
ALPK3-201ENST00000258888 BICDL1Q6ZP65 573 aa15.72■□□□□ 0.11
ALPK3-201ENST00000258888 UBXN4Q92575 508 aa15.72■□□□□ 0.11
ALPK3-201ENST00000258888 DNMBPQ6XZF7 1577 aa15.72■□□□□ 0.11
ALPK3-201ENST00000258888 PAF1Q8N7H5 531 aa15.71■□□□□ 0.11
ALPK3-201ENST00000258888 RAB11FIP3O75154 756 aa15.71■□□□□ 0.11
ALPK3-201ENST00000258888 KLHL10Q6JEL2 608 aa15.71■□□□□ 0.11
ALPK3-201ENST00000258888 TRIM27P14373 513 aa15.71■□□□□ 0.11
ALPK3-201ENST00000258888 ZC3H6P61129 1189 aaKnown RBP15.71■□□□□ 0.11
ALPK3-201ENST00000258888 SH2B1Q9NRF2 756 aaPredicted RBP15.71■□□□□ 0.11
ALPK3-201ENST00000258888 BMP2KQ9NSY1 1161 aaPredicted RBP15.71■□□□□ 0.11
ALPK3-201ENST00000258888 CCDC61Q9Y6R9 512 aa15.71■□□□□ 0.11
ALPK3-201ENST00000258888 NUTM2BA6NNL0 878 aaPredicted RBP15.71■□□□□ 0.11
ALPK3-201ENST00000258888 NUTM2EB1AL46 878 aaPredicted RBP15.71■□□□□ 0.11
ALPK3-201ENST00000258888 WAPLQ7Z5K2 1190 aa15.71■□□□□ 0.11
ALPK3-201ENST00000258888 NUTM2AQ8IVF1 878 aaPredicted RBP15.71■□□□□ 0.11
ALPK3-201ENST00000258888 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.71■□□□□ 0.11
ALPK3-201ENST00000258888 NME9Q86XW9 330 aa15.71■□□□□ 0.11
ALPK3-201ENST00000258888 SEPT7Q16181 437 aaKnown RBP15.71■□□□□ 0.1
ALPK3-201ENST00000258888 CKAP2LQ8IYA6 745 aa15.71■□□□□ 0.1
ALPK3-201ENST00000258888 KIF14Q15058 1648 aa15.7■□□□□ 0.1
ALPK3-201ENST00000258888 SCAND2PQ9GZW5 306 aaPredicted RBP15.7■□□□□ 0.1
ALPK3-201ENST00000258888 ABCF2Q9UG63 623 aa15.7■□□□□ 0.1
ALPK3-201ENST00000258888 IGHMBP2P38935 993 aaKnown RBP15.7■□□□□ 0.1
ALPK3-201ENST00000258888 EMILIN1Q9Y6C2 1016 aa15.7■□□□□ 0.1
ALPK3-201ENST00000258888 LARP6Q9BRS8 491 aaKnown RBP15.7■□□□□ 0.1
ALPK3-201ENST00000258888 PPP1R1BQ9UD71 204 aaPredicted RBP15.69■□□□□ 0.1
ALPK3-201ENST00000258888 ANKRD62A6NC57 917 aa15.69■□□□□ 0.1
ALPK3-201ENST00000258888 USP5P45974 858 aa15.69■□□□□ 0.1
ALPK3-201ENST00000258888 PLEKHH1Q9ULM0 1364 aa15.69■□□□□ 0.1
ALPK3-201ENST00000258888 PTCD1O75127 700 aaKnown RBP15.69■□□□□ 0.1
ALPK3-201ENST00000258888 PTPN14Q15678 1187 aa15.69■□□□□ 0.1
ALPK3-201ENST00000258888 CEP131Q9UPN4 1083 aa15.69■□□□□ 0.1
ALPK3-201ENST00000258888 TAF3Q5VWG9 929 aa15.69■□□□□ 0.1
ALPK3-201ENST00000258888 PDIA4P13667 645 aaKnown RBP15.68■□□□□ 0.1
ALPK3-201ENST00000258888 CLIP2Q9UDT6 1046 aa15.68■□□□□ 0.1
ALPK3-201ENST00000258888 MYD88Q99836 296 aa15.68■□□□□ 0.1
ALPK3-201ENST00000258888 MAGI1Q96QZ7 1491 aaPredicted RBP15.68■□□□□ 0.1
ALPK3-201ENST00000258888 GUCY1B3Q02153 619 aa15.68■□□□□ 0.1
ALPK3-201ENST00000258888 NCOA1Q15788 1441 aa15.68■□□□□ 0.1
ALPK3-201ENST00000258888 WWC2Q6AWC2 1192 aa15.68■□□□□ 0.1
ALPK3-201ENST00000258888 TAF4BQ92750 862 aa15.68■□□□□ 0.1
ALPK3-201ENST00000258888 C8orf76Q96K31 380 aa15.68■□□□□ 0.1
ALPK3-201ENST00000258888 USP25Q9UHP3 1055 aa15.68■□□□□ 0.1
ALPK3-201ENST00000258888 TBC1D9Q6ZT07 1266 aa15.67■□□□□ 0.1
ALPK3-201ENST00000258888 ZNF76P36508 570 aa15.67■□□□□ 0.1
ALPK3-201ENST00000258888 GDPD2Q9HCC8 539 aa15.67■□□□□ 0.1
ALPK3-201ENST00000258888 TAF7Q15545 349 aaPredicted RBP15.67■□□□□ 0.1
ALPK3-201ENST00000258888 TSHZ3Q63HK5 1081 aa15.67■□□□□ 0.1
ALPK3-201ENST00000258888 ZNF526Q8TF50 670 aaPredicted RBP15.67■□□□□ 0.1
ALPK3-201ENST00000258888 PRDM10Q9NQV6 1147 aa15.67■□□□□ 0.1
ALPK3-201ENST00000258888 LARP1Q6PKG0 1096 aaKnown RBP15.67■□□□□ 0.1
ALPK3-201ENST00000258888 ANO10Q9NW15 660 aa15.67■□□□□ 0.1
ALPK3-201ENST00000258888 LIMCH1Q9UPQ0 1083 aa15.67■□□□□ 0.1
ALPK3-201ENST00000258888 KIF2AO00139 706 aaPredicted RBP15.67■□□□□ 0.1
ALPK3-201ENST00000258888 MINDY4BA8MYZ0 360 aa15.67■□□□□ 0.1
ALPK3-201ENST00000258888 GOLGA8BA8MQT2 603 aa15.67■□□□□ 0.1
ALPK3-201ENST00000258888 CCDC8Q9H0W5 538 aaPredicted RBP15.66■□□□□ 0.1
ALPK3-201ENST00000258888 ANKLE2Q86XL3 938 aa15.66■□□□□ 0.1
ALPK3-201ENST00000258888 ZSCAN29Q8IWY8 852 aaPredicted RBP15.66■□□□□ 0.1
ALPK3-201ENST00000258888 CC2D2AQ9P2K1 1620 aa15.66■□□□□ 0.1
ALPK3-201ENST00000258888 CCDC148Q8NFR7 591 aa15.66■□□□□ 0.1
ALPK3-201ENST00000258888 CCDC82Q8N4S0 544 aa15.65■□□□□ 0.1
ALPK3-201ENST00000258888 GOLGA6L7A0A1B0GV03 622 aa15.65■□□□□ 0.1
ALPK3-201ENST00000258888 ABCC5O15440 1437 aa15.65■□□□□ 0.1
ALPK3-201ENST00000258888 ZRSR2Q15696 482 aaKnown RBP15.65■□□□□ 0.1
ALPK3-201ENST00000258888 KRI1Q8N9T8 703 aaKnown RBP15.65■□□□□ 0.1
ALPK3-201ENST00000258888 C16orf45Q96MC5 204 aaPredicted RBP15.65■□□□□ 0.1
ALPK3-201ENST00000258888 SSR1P43307 286 aaKnown RBP15.65■□□□□ 0.1
ALPK3-201ENST00000258888 DNAAF4Q8WXU2 420 aa15.65■□□□□ 0.1
ALPK3-201ENST00000258888 NAPBQ9H115 298 aa15.65■□□□□ 0.1
ALPK3-201ENST00000258888 SEC63Q9UGP8 760 aaKnown RBP15.65■□□□□ 0.1
ALPK3-201ENST00000258888 TMCO3Q6UWJ1 677 aa15.65■□□□□ 0.1
ALPK3-201ENST00000258888 KIF18AQ8NI77 898 aa15.65■□□□□ 0.1
ALPK3-201ENST00000258888 TOP1P11387 765 aaKnown RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms