RNA–Protein interactions for RNA: ENST00000258613.4

THSD1-201, Transcript of thrombospondin type 1 domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THSD1, Length 2,962 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THSD1-201ENST00000258613 CCDC30Q5VVM6 783 aa16.35■□□□□ 0.21
THSD1-201ENST00000258613 PNMA6EA0A0J9YXQ4 647 aa16.35■□□□□ 0.21
THSD1-201ENST00000258613 CHRNA2Q15822 529 aa16.35■□□□□ 0.21
THSD1-201ENST00000258613 KCNH5Q8NCM2 988 aa16.35■□□□□ 0.21
THSD1-201ENST00000258613 HAP1P54257 671 aaPredicted RBP16.35■□□□□ 0.21
THSD1-201ENST00000258613 BECN1Q14457 450 aa16.35■□□□□ 0.21
THSD1-201ENST00000258613 C19orf44Q9H6X5 657 aa16.34■□□□□ 0.21
THSD1-201ENST00000258613 CHPF2Q9P2E5 772 aa16.34■□□□□ 0.21
THSD1-201ENST00000258613 HTATSF1O43719 755 aaKnown RBP16.33■□□□□ 0.21
THSD1-201ENST00000258613 PXDNQ92626 1479 aa16.33■□□□□ 0.2
THSD1-201ENST00000258613 TEFQ10587 303 aa16.32■□□□□ 0.2
THSD1-201ENST00000258613 RPAP2Q8IXW5 612 aaPredicted RBP16.32■□□□□ 0.2
THSD1-201ENST00000258613 FOXD4L1Q9NU39 408 aa16.32■□□□□ 0.2
THSD1-201ENST00000258613 TMEM94Q12767 1356 aa16.32■□□□□ 0.2
THSD1-201ENST00000258613 BTBD11A6QL63 1104 aa16.32■□□□□ 0.2
THSD1-201ENST00000258613 CD2BP2O95400 341 aaKnown RBP16.32■□□□□ 0.2
THSD1-201ENST00000258613 EIF4A1P60842 406 aaKnown RBP16.32■□□□□ 0.2
THSD1-201ENST00000258613 LRRFIP2Q9Y608 721 aaKnown RBP16.32■□□□□ 0.2
THSD1-201ENST00000258613 KIF24Q5T7B8 1368 aa16.31■□□□□ 0.2
THSD1-201ENST00000258613 ATF3P18847 181 aa16.31■□□□□ 0.2
THSD1-201ENST00000258613 NLRP2Q9NX02 1062 aa16.31■□□□□ 0.2
THSD1-201ENST00000258613 PROSER3Q2NL68 480 aa16.31■□□□□ 0.2
THSD1-201ENST00000258613 RGPD5Q99666 1765 aa16.31■□□□□ 0.2
THSD1-201ENST00000258613 C1orf167Q5SNV9 1468 aa16.3■□□□□ 0.2
THSD1-201ENST00000258613 CCT4P50991 539 aaKnown RBP16.3■□□□□ 0.2
THSD1-201ENST00000258613 SLC39A6Q13433 755 aa16.3■□□□□ 0.2
THSD1-201ENST00000258613 USP44Q9H0E7 712 aa16.3■□□□□ 0.2
THSD1-201ENST00000258613 ANTXR1Q9H6X2 564 aa16.3■□□□□ 0.2
THSD1-201ENST00000258613 GNAI2P04899 355 aa16.29■□□□□ 0.2
THSD1-201ENST00000258613 PLEKHO1Q53GL0 409 aaPredicted RBP16.29■□□□□ 0.2
THSD1-201ENST00000258613 TTC22Q5TAA0 569 aa16.29■□□□□ 0.2
THSD1-201ENST00000258613 KIF2CQ99661 725 aa16.29■□□□□ 0.2
THSD1-201ENST00000258613 PODXL2Q9NZ53 605 aa16.29■□□□□ 0.2
THSD1-201ENST00000258613 PI4KAP2A4QPH2 592 aa16.29■□□□□ 0.2
THSD1-201ENST00000258613 PI4KAP1Q8N8J0 262 aa16.29■□□□□ 0.2
THSD1-201ENST00000258613 CEMIPQ8WUJ3 1361 aa16.29■□□□□ 0.2
THSD1-201ENST00000258613 RNMTO43148 476 aaKnown RBP16.28■□□□□ 0.2
THSD1-201ENST00000258613 NBPF7P0C2Y1 421 aaPredicted RBP16.28■□□□□ 0.2
THSD1-201ENST00000258613 SDSP20132 328 aa16.28■□□□□ 0.2
THSD1-201ENST00000258613 C1orf141Q5JVX7 400 aa16.28■□□□□ 0.2
THSD1-201ENST00000258613 PIP4K2AP48426 406 aaPredicted RBP16.28■□□□□ 0.2
THSD1-201ENST00000258613 DNAJC5Q9H3Z4 198 aa16.28■□□□□ 0.2
THSD1-201ENST00000258613 AKAP4Q5JQC9 854 aa16.27■□□□□ 0.2
THSD1-201ENST00000258613 IL1RAPL2Q9NP60 686 aa16.27■□□□□ 0.2
THSD1-201ENST00000258613 LRRC37A3O60309 1634 aa16.27■□□□□ 0.19
THSD1-201ENST00000258613 CSB-PGBD3P0DP91 1061 aa16.26■□□□□ 0.19
THSD1-201ENST00000258613 USP35Q9P2H5 1018 aa16.26■□□□□ 0.19
THSD1-201ENST00000258613 CDC45O75419 566 aa16.26■□□□□ 0.19
THSD1-201ENST00000258613 AIMP1Q12904 312 aaKnown RBP16.26■□□□□ 0.19
THSD1-201ENST00000258613 ERBB3P21860 1342 aa16.25■□□□□ 0.19
THSD1-201ENST00000258613 STRCP1A6NGW2 1772 aa16.25■□□□□ 0.19
THSD1-201ENST00000258613 RBM25P49756 843 aaKnown RBP16.25■□□□□ 0.19
THSD1-201ENST00000258613 USP54Q70EL1 1684 aa16.25■□□□□ 0.19
THSD1-201ENST00000258613 FAM208AQ9UK61 1670 aaKnown RBP16.24■□□□□ 0.19
THSD1-201ENST00000258613 UBTFL1P0CB47 393 aaPredicted RBP16.24■□□□□ 0.19
THSD1-201ENST00000258613 HMMRO75330 724 aa16.23■□□□□ 0.19
THSD1-201ENST00000258613 MAP4K4O95819 1239 aaPredicted RBP16.23■□□□□ 0.19
THSD1-201ENST00000258613 PDE1AP54750 535 aa16.23■□□□□ 0.19
THSD1-201ENST00000258613 CWF19L2Q2TBE0 894 aaKnown RBP16.23■□□□□ 0.19
THSD1-201ENST00000258613 HSCBQ8IWL3 235 aa16.23■□□□□ 0.19
THSD1-201ENST00000258613 NFATC2IPQ8NCF5 419 aa16.23■□□□□ 0.19
THSD1-201ENST00000258613 ATP8B2P98198 1209 aa16.22■□□□□ 0.19
THSD1-201ENST00000258613 PPP1R42Q7Z4L9 355 aa16.22■□□□□ 0.19
THSD1-201ENST00000258613 NUTM1Q86Y26 1132 aa16.22■□□□□ 0.19
THSD1-201ENST00000258613 GNAI3P08754 354 aa16.22■□□□□ 0.19
THSD1-201ENST00000258613 SRCIN1Q9C0H9 1055 aa16.22■□□□□ 0.19
THSD1-201ENST00000258613 MST1RQ04912 1400 aa16.22■□□□□ 0.19
THSD1-201ENST00000258613 GIGYF1O75420 1035 aaPredicted RBP16.21■□□□□ 0.19
THSD1-201ENST00000258613 MED1Q15648 1581 aaPredicted RBP16.21■□□□□ 0.19
THSD1-201ENST00000258613 AMOTQ4VCS5 1084 aa16.21■□□□□ 0.19
THSD1-201ENST00000258613 UNC5CLQ8IV45 518 aa16.21■□□□□ 0.19
THSD1-201ENST00000258613 DNAAF4Q8WXU2 420 aa16.21■□□□□ 0.19
THSD1-201ENST00000258613 RAPGEF4Q8WZA2 1011 aa16.21■□□□□ 0.19
THSD1-201ENST00000258613 TRPM3Q9HCF6 1732 aaPredicted RBP16.21■□□□□ 0.18
THSD1-201ENST00000258613 MYL6BP14649 208 aa16.2■□□□□ 0.18
THSD1-201ENST00000258613 JARID2Q92833 1246 aaPredicted RBP16.2■□□□□ 0.18
THSD1-201ENST00000258613 ARXQ96QS3 562 aa16.2■□□□□ 0.18
THSD1-201ENST00000258613 SURF6O75683 361 aaKnown RBP16.2■□□□□ 0.18
THSD1-201ENST00000258613 LRRCC1Q9C099 1032 aa16.2■□□□□ 0.18
THSD1-201ENST00000258613 MAP3K2Q9Y2U5 619 aa16.2■□□□□ 0.18
THSD1-201ENST00000258613 SRGAP3O43295 1099 aa16.2■□□□□ 0.18
THSD1-201ENST00000258613 GSE1Q14687 1217 aa16.2■□□□□ 0.18
THSD1-201ENST00000258613 BEND3Q5T5X7 828 aa16.2■□□□□ 0.18
THSD1-201ENST00000258613 RILPL2Q969X0 211 aa16.19■□□□□ 0.18
THSD1-201ENST00000258613 ADCY9O60503 1353 aa16.19■□□□□ 0.18
THSD1-201ENST00000258613 SLIT3O75094 1523 aa16.19■□□□□ 0.18
THSD1-201ENST00000258613 SOS1Q07889 1333 aaPredicted RBP16.18■□□□□ 0.18
THSD1-201ENST00000258613 TRIM6-TRIM34B2RNG4 842 aa16.18■□□□□ 0.18
THSD1-201ENST00000258613 HSP90AB1P08238 724 aaKnown RBP16.18■□□□□ 0.18
THSD1-201ENST00000258613 BABAM1Q9NWV8 329 aa16.18■□□□□ 0.18
THSD1-201ENST00000258613 CACNA1FO60840 1977 aa16.18■□□□□ 0.18
THSD1-201ENST00000258613 USP26Q9BXU7 913 aa16.17■□□□□ 0.18
THSD1-201ENST00000258613 AK9Q5TCS8 1911 aa16.17■□□□□ 0.18
THSD1-201ENST00000258613 PA2G4Q9UQ80 394 aaKnown RBP16.17■□□□□ 0.18
THSD1-201ENST00000258613 MX1P20591 662 aa16.17■□□□□ 0.18
THSD1-201ENST00000258613 CYP27B1O15528 508 aa16.16■□□□□ 0.18
THSD1-201ENST00000258613 GZF1Q9H116 711 aaPredicted RBP16.16■□□□□ 0.18
THSD1-201ENST00000258613 DBF4Q9UBU7 674 aaPredicted RBP16.16■□□□□ 0.18
THSD1-201ENST00000258613 MEGF6O75095 1541 aa16.16■□□□□ 0.18
THSD1-201ENST00000258613 ZNF335Q9H4Z2 1342 aaPredicted RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms