RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 MAP2P11137 1827 aaKnown RBP13.87□□□□□ -0.19
TROAP-201ENST00000257909 TCHHQ07283 1943 aa13.87□□□□□ -0.19
TROAP-201ENST00000257909 PTPRCP08575 1304 aa13.87□□□□□ -0.19
TROAP-201ENST00000257909 PREX1Q8TCU6 1659 aa13.87□□□□□ -0.19
TROAP-201ENST00000257909 KIAA1524Q8TCG1 905 aa13.87□□□□□ -0.19
TROAP-201ENST00000257909 ANKRD7Q92527 254 aa13.87□□□□□ -0.19
TROAP-201ENST00000257909 GDPD2Q9HCC8 539 aa13.87□□□□□ -0.19
TROAP-201ENST00000257909 HCLS1P14317 486 aaPredicted RBP13.87□□□□□ -0.19
TROAP-201ENST00000257909 MPNDQ8N594 471 aa13.87□□□□□ -0.19
TROAP-201ENST00000257909 FEZ1Q99689 392 aa13.87□□□□□ -0.19
TROAP-201ENST00000257909 MSH6P52701 1360 aa13.86□□□□□ -0.19
TROAP-201ENST00000257909 UBE2HP62256 183 aa13.86□□□□□ -0.19
TROAP-201ENST00000257909 TAF3Q5VWG9 929 aa13.86□□□□□ -0.19
TROAP-201ENST00000257909 C17orf53Q8N3J3 647 aaPredicted RBP13.86□□□□□ -0.19
TROAP-201ENST00000257909 STK26Q9P289 416 aa13.86□□□□□ -0.19
TROAP-201ENST00000257909 YTHDC2Q9H6S0 1430 aaKnown RBP13.86□□□□□ -0.19
TROAP-201ENST00000257909 GOLGA6L6A8MZA4 724 aa13.86□□□□□ -0.19
TROAP-201ENST00000257909 CTIFO43310 598 aaKnown RBP13.86□□□□□ -0.19
TROAP-201ENST00000257909 EPB41L2O43491 1005 aaKnown RBP13.86□□□□□ -0.19
TROAP-201ENST00000257909 MINK1Q8N4C8 1332 aaPredicted RBP13.85□□□□□ -0.19
TROAP-201ENST00000257909 IL13P35225 146 aa13.85□□□□□ -0.19
TROAP-201ENST00000257909 RPAP1Q9BWH6 1393 aaPredicted RBP13.85□□□□□ -0.19
TROAP-201ENST00000257909 RICTORQ6R327 1708 aa13.85□□□□□ -0.19
TROAP-201ENST00000257909 IDI1Q13907 227 aa13.85□□□□□ -0.19
TROAP-201ENST00000257909 PALD1Q9ULE6 856 aa13.85□□□□□ -0.19
TROAP-201ENST00000257909 RIOK3O14730 519 aaKnown RBP13.84□□□□□ -0.19
TROAP-201ENST00000257909 FOXD4L6Q3SYB3 417 aaPredicted RBP13.84□□□□□ -0.19
TROAP-201ENST00000257909 FOXD4L3Q6VB84 417 aaPredicted RBP13.84□□□□□ -0.19
TROAP-201ENST00000257909 MEIS3Q99687 375 aa13.84□□□□□ -0.19
TROAP-201ENST00000257909 SRCIN1Q9C0H9 1055 aa13.84□□□□□ -0.19
TROAP-201ENST00000257909 TUBGCP6Q96RT7 1819 aa13.84□□□□□ -0.19
TROAP-201ENST00000257909 CDK12Q9NYV4 1490 aaPredicted RBP13.84□□□□□ -0.19
TROAP-201ENST00000257909 FAM177BA6PVY3 158 aa13.84□□□□□ -0.19
TROAP-201ENST00000257909 NOL8Q76FK4 1167 aaKnown RBP13.84□□□□□ -0.19
TROAP-201ENST00000257909 ANO2Q9NQ90 1003 aa13.84□□□□□ -0.19
TROAP-201ENST00000257909 CABP1Q9NZU7 370 aa13.84□□□□□ -0.19
TROAP-201ENST00000257909 PRAM1Q96QH2 718 aa13.83□□□□□ -0.2
TROAP-201ENST00000257909 ATP6V1DQ9Y5K8 247 aa13.83□□□□□ -0.2
TROAP-201ENST00000257909 SPDYE4A6NLX3 237 aa13.83□□□□□ -0.2
TROAP-201ENST00000257909 SYCP1Q15431 976 aa13.83□□□□□ -0.2
TROAP-201ENST00000257909 KIAA0232Q92628 1395 aa13.82□□□□□ -0.2
TROAP-201ENST00000257909 RAPGEF3O95398 923 aa13.82□□□□□ -0.2
TROAP-201ENST00000257909 CHMLP26374 656 aa13.82□□□□□ -0.2
TROAP-201ENST00000257909 FUCA2Q9BTY2 467 aa13.82□□□□□ -0.2
TROAP-201ENST00000257909 CDK19Q9BWU1 502 aa13.82□□□□□ -0.2
TROAP-201ENST00000257909 OGFRQ9NZT2 677 aa13.82□□□□□ -0.2
TROAP-201ENST00000257909 SALL3Q9BXA9 1300 aa13.82□□□□□ -0.2
TROAP-201ENST00000257909 ZSCAN22P10073 491 aaPredicted RBP13.82□□□□□ -0.2
TROAP-201ENST00000257909 FBLN1P23142 703 aa13.82□□□□□ -0.2
TROAP-201ENST00000257909 CNPY2Q9Y2B0 182 aa13.82□□□□□ -0.2
TROAP-201ENST00000257909 ATP7BP35670 1465 aa13.81□□□□□ -0.2
TROAP-201ENST00000257909 FAM83GA6ND36 823 aa13.81□□□□□ -0.2
TROAP-201ENST00000257909 U2AF2P26368 475 aaKnown RBP eCLIP13.81□□□□□ -0.24e-12■■□□□ 13.8
TROAP-201ENST00000257909 PLCB2Q00722 1185 aa13.81□□□□□ -0.2
TROAP-201ENST00000257909 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.81□□□□□ -0.2
TROAP-201ENST00000257909 KCNF1Q9H3M0 494 aa13.81□□□□□ -0.2
TROAP-201ENST00000257909 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.81□□□□□ -0.2
TROAP-201ENST00000257909 PYCARDQ9ULZ3 195 aa13.81□□□□□ -0.2
TROAP-201ENST00000257909 UPF3BQ9BZI7 483 aaKnown RBP13.8□□□□□ -0.2
TROAP-201ENST00000257909 ALKQ9UM73 1620 aa13.8□□□□□ -0.2
TROAP-201ENST00000257909 KRT24Q2M2I5 525 aa13.8□□□□□ -0.2
TROAP-201ENST00000257909 LRRCC1Q9C099 1032 aa13.8□□□□□ -0.2
TROAP-201ENST00000257909 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.8□□□□□ -0.2
TROAP-201ENST00000257909 EMILIN1Q9Y6C2 1016 aa13.8□□□□□ -0.2
TROAP-201ENST00000257909 AATKQ6ZMQ8 1374 aa13.79□□□□□ -0.2
TROAP-201ENST00000257909 SETD1AO15047 1707 aaKnown RBP13.79□□□□□ -0.2
TROAP-201ENST00000257909 TRIM6-TRIM34B2RNG4 842 aa13.79□□□□□ -0.2
TROAP-201ENST00000257909 STX6O43752 255 aa13.79□□□□□ -0.2
TROAP-201ENST00000257909 HSPA4P34932 840 aa13.79□□□□□ -0.2
TROAP-201ENST00000257909 CCT4P50991 539 aaKnown RBP13.79□□□□□ -0.2
TROAP-201ENST00000257909 CHL1O00533 1208 aa13.79□□□□□ -0.2
TROAP-201ENST00000257909 GABPB1Q06547 395 aaPredicted RBP13.79□□□□□ -0.2
TROAP-201ENST00000257909 DCTN1Q14203 1278 aa13.79□□□□□ -0.2
TROAP-201ENST00000257909 RILPL2Q969X0 211 aa13.79□□□□□ -0.2
TROAP-201ENST00000257909 F13A1P00488 732 aa13.78□□□□□ -0.2
TROAP-201ENST00000257909 CCDC192P0DO97 292 aa13.78□□□□□ -0.2
TROAP-201ENST00000257909 STAP2Q9UGK3 403 aa13.78□□□□□ -0.2
TROAP-201ENST00000257909 RIMBP3CA6NJZ7 1639 aa13.78□□□□□ -0.2
TROAP-201ENST00000257909 RIMBP3BA6NNM3 1639 aa13.78□□□□□ -0.2
TROAP-201ENST00000257909 RIMBP3Q9UFD9 1639 aa13.78□□□□□ -0.2
TROAP-201ENST00000257909 GNAI2P04899 355 aa13.78□□□□□ -0.2
TROAP-201ENST00000257909 GIMAP6Q6P9H5 292 aa13.78□□□□□ -0.2
TROAP-201ENST00000257909 AOX1Q06278 1338 aa13.77□□□□□ -0.21
TROAP-201ENST00000257909 AP5Z1O43299 807 aa13.77□□□□□ -0.21
TROAP-201ENST00000257909 SYT1P21579 422 aa13.77□□□□□ -0.21
TROAP-201ENST00000257909 TAF7LQ5H9L4 462 aa13.77□□□□□ -0.21
TROAP-201ENST00000257909 SMTNL1A8MU46 457 aa13.77□□□□□ -0.21
TROAP-201ENST00000257909 CGNQ9P2M7 1197 aaKnown RBP13.77□□□□□ -0.21
TROAP-201ENST00000257909 EXOC6BQ9Y2D4 811 aa13.77□□□□□ -0.21
TROAP-201ENST00000257909 NEO1Q92859 1461 aa13.76□□□□□ -0.21
TROAP-201ENST00000257909 FIBPO43427 364 aa13.76□□□□□ -0.21
TROAP-201ENST00000257909 SLC4A2P04920 1241 aa13.76□□□□□ -0.21
TROAP-201ENST00000257909 NCBP1Q09161 790 aaKnown RBP13.76□□□□□ -0.21
TROAP-201ENST00000257909 TSHZ3Q63HK5 1081 aa13.76□□□□□ -0.21
TROAP-201ENST00000257909 ZNF771Q7L3S4 317 aaPredicted RBP13.76□□□□□ -0.21
TROAP-201ENST00000257909 SPC24Q8NBT2 197 aa13.76□□□□□ -0.21
TROAP-201ENST00000257909 SLC52A1Q9NWF4 448 aa13.76□□□□□ -0.21
TROAP-201ENST00000257909 SMC3Q9UQE7 1217 aa13.75□□□□□ -0.21
TROAP-201ENST00000257909 EDC4Q6P2E9 1401 aaKnown RBP13.75□□□□□ -0.21
TROAP-201ENST00000257909 FAM200AQ8TCP9 573 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms