RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 UNC5CLQ8IV45 518 aa14.62□□□□□ -0.07
CCNA1-201ENST00000255465 FEZ1Q99689 392 aa14.62□□□□□ -0.07
CCNA1-201ENST00000255465 COL18A1P39060 1754 aa14.62□□□□□ -0.07
CCNA1-201ENST00000255465 LMO7Q8WWI1 1683 aa14.62□□□□□ -0.07
CCNA1-201ENST00000255465 TULP1O00294 542 aaPredicted RBP14.61□□□□□ -0.07
CCNA1-201ENST00000255465 CEP120Q8N960 986 aa14.61□□□□□ -0.07
CCNA1-201ENST00000255465 BTG4Q9NY30 223 aa14.61□□□□□ -0.07
CCNA1-201ENST00000255465 CGNQ9P2M7 1197 aaKnown RBP14.61□□□□□ -0.07
CCNA1-201ENST00000255465 PNISRQ8TF01 805 aaKnown RBP14.61□□□□□ -0.07
CCNA1-201ENST00000255465 COG3Q96JB2 828 aa14.61□□□□□ -0.07
CCNA1-201ENST00000255465 TRPC5Q9UL62 973 aaPredicted RBP14.61□□□□□ -0.07
CCNA1-201ENST00000255465 KIF3AQ9Y496 699 aa14.61□□□□□ -0.07
CCNA1-201ENST00000255465 ATRNO75882 1429 aa14.6□□□□□ -0.07
CCNA1-201ENST00000255465 RALBP1Q15311 655 aa14.6□□□□□ -0.07
CCNA1-201ENST00000255465 GRIPAP1Q4V328 841 aa14.6□□□□□ -0.07
CCNA1-201ENST00000255465 GGNBP2Q9H3C7 697 aa14.6□□□□□ -0.07
CCNA1-201ENST00000255465 ANKRD26Q9UPS8 1709 aa14.6□□□□□ -0.07
CCNA1-201ENST00000255465 ZBTB7CA1YPR0 619 aa14.59□□□□□ -0.07
CCNA1-201ENST00000255465 TULP2O00295 520 aa14.59□□□□□ -0.07
CCNA1-201ENST00000255465 ARHGEF25Q86VW2 580 aa14.59□□□□□ -0.07
CCNA1-201ENST00000255465 CAMTA1Q9Y6Y1 1673 aa14.59□□□□□ -0.07
CCNA1-201ENST00000255465 HSP90AB1P08238 724 aaKnown RBP14.59□□□□□ -0.07
CCNA1-201ENST00000255465 RXRBP28702 533 aa14.59□□□□□ -0.07
CCNA1-201ENST00000255465 TIGD1Q96MW7 591 aa14.59□□□□□ -0.07
CCNA1-201ENST00000255465 NASPP49321 788 aaPredicted RBP14.58□□□□□ -0.08
CCNA1-201ENST00000255465 GZF1Q9H116 711 aaPredicted RBP14.58□□□□□ -0.08
CCNA1-201ENST00000255465 ZKSCAN5Q9Y2L8 839 aa14.58□□□□□ -0.08
CCNA1-201ENST00000255465 CGNL1Q0VF96 1302 aa14.58□□□□□ -0.08
CCNA1-201ENST00000255465 MAPK8IP3Q9UPT6 1336 aa14.58□□□□□ -0.08
CCNA1-201ENST00000255465 RBM6P78332 1123 aaKnown RBP14.57□□□□□ -0.08
CCNA1-201ENST00000255465 SLKQ9H2G2 1235 aaPredicted RBP14.57□□□□□ -0.08
CCNA1-201ENST00000255465 UPF2Q9HAU5 1272 aaKnown RBP14.57□□□□□ -0.08
CCNA1-201ENST00000255465 AATKQ6ZMQ8 1374 aa14.57□□□□□ -0.08
CCNA1-201ENST00000255465 MAP2P11137 1827 aaKnown RBP14.57□□□□□ -0.08
CCNA1-201ENST00000255465 VPS72Q15906 364 aa14.57□□□□□ -0.08
CCNA1-201ENST00000255465 CALCOCO1Q9P1Z2 691 aa14.57□□□□□ -0.08
CCNA1-201ENST00000255465 GLI3P10071 1580 aa14.56□□□□□ -0.08
CCNA1-201ENST00000255465 PDLIM2Q96JY6 352 aa14.56□□□□□ -0.08
CCNA1-201ENST00000255465 GJD4Q96KN9 370 aaPredicted RBP14.56□□□□□ -0.08
CCNA1-201ENST00000255465 CIZ1Q9ULV3 898 aaPredicted RBP14.56□□□□□ -0.08
CCNA1-201ENST00000255465 PHF14O94880 888 aa14.55□□□□□ -0.08
CCNA1-201ENST00000255465 APPP05067 770 aa14.55□□□□□ -0.08
CCNA1-201ENST00000255465 FBLN1P23142 703 aa14.55□□□□□ -0.08
CCNA1-201ENST00000255465 CNPY4Q8N129 248 aa14.55□□□□□ -0.08
CCNA1-201ENST00000255465 STRN4Q9NRL3 753 aa14.55□□□□□ -0.08
CCNA1-201ENST00000255465 EVA1CP58658 441 aa14.55□□□□□ -0.08
CCNA1-201ENST00000255465 CBX1P83916 185 aa14.55□□□□□ -0.08
CCNA1-201ENST00000255465 CRBNQ96SW2 442 aa14.55□□□□□ -0.08
CCNA1-201ENST00000255465 AXIN2Q9Y2T1 843 aa14.55□□□□□ -0.08
CCNA1-201ENST00000255465 CCDC9Q9Y3X0 531 aaKnown RBP14.55□□□□□ -0.08
CCNA1-201ENST00000255465 KNSTRNQ9Y448 316 aa14.55□□□□□ -0.08
CCNA1-201ENST00000255465 ABCC6O95255 1503 aa14.54□□□□□ -0.08
CCNA1-201ENST00000255465 COL5A2P05997 1499 aaPredicted RBP14.54□□□□□ -0.08
CCNA1-201ENST00000255465 KCNJ4P48050 445 aa14.54□□□□□ -0.08
CCNA1-201ENST00000255465 ZNF771Q7L3S4 317 aaPredicted RBP14.54□□□□□ -0.08
CCNA1-201ENST00000255465 GBP4Q96PP9 640 aa14.54□□□□□ -0.08
CCNA1-201ENST00000255465 CDK12Q9NYV4 1490 aaPredicted RBP14.54□□□□□ -0.08
CCNA1-201ENST00000255465 PER1O15534 1290 aaPredicted RBP14.53□□□□□ -0.08
CCNA1-201ENST00000255465 CTR9Q6PD62 1173 aa14.53□□□□□ -0.08
CCNA1-201ENST00000255465 CCDC39Q9UFE4 941 aa14.53□□□□□ -0.08
CCNA1-201ENST00000255465 MCCP23508 829 aa14.52□□□□□ -0.08
CCNA1-201ENST00000255465 SPATA31A5Q5VU36 1347 aa14.52□□□□□ -0.09
CCNA1-201ENST00000255465 SPATA31A7Q8IWB4 1347 aa14.52□□□□□ -0.09
CCNA1-201ENST00000255465 PDCL2Q8N4E4 241 aa14.52□□□□□ -0.09
CCNA1-201ENST00000255465 OGFRQ9NZT2 677 aa14.52□□□□□ -0.09
CCNA1-201ENST00000255465 NSD2O96028 1365 aa14.52□□□□□ -0.09
CCNA1-201ENST00000255465 BRWD3Q6RI45 1802 aa14.51□□□□□ -0.09
CCNA1-201ENST00000255465 MAP3K19Q56UN5 1328 aa14.51□□□□□ -0.09
CCNA1-201ENST00000255465 RRS1Q15050 365 aaKnown RBP14.51□□□□□ -0.09
CCNA1-201ENST00000255465 CC2D1BQ5T0F9 858 aaKnown RBP14.51□□□□□ -0.09
CCNA1-201ENST00000255465 LARP1Q6PKG0 1096 aaKnown RBP14.51□□□□□ -0.09
CCNA1-201ENST00000255465 WWC1Q8IX03 1113 aa14.51□□□□□ -0.09
CCNA1-201ENST00000255465 TBC1D32Q96NH3 1257 aa14.51□□□□□ -0.09
CCNA1-201ENST00000255465 TBC1D2Q9BYX2 928 aa14.51□□□□□ -0.09
CCNA1-201ENST00000255465 RGS12O14924 1447 aa14.51□□□□□ -0.09
CCNA1-201ENST00000255465 MFAP1P55081 439 aaKnown RBP14.5□□□□□ -0.09
CCNA1-201ENST00000255465 AMER1Q5JTC6 1135 aaPredicted RBP14.5□□□□□ -0.09
CCNA1-201ENST00000255465 GAS2L3Q86XJ1 694 aa14.5□□□□□ -0.09
CCNA1-201ENST00000255465 PEAK1Q9H792 1746 aa14.5□□□□□ -0.09
CCNA1-201ENST00000255465 SPATA31A1Q5TZJ5 1347 aa14.5□□□□□ -0.09
CCNA1-201ENST00000255465 IP6K1Q92551 441 aa14.5□□□□□ -0.09
CCNA1-201ENST00000255465 AMPHP49418 695 aa14.49□□□□□ -0.09
CCNA1-201ENST00000255465 KCNG1Q9UIX4 513 aa14.49□□□□□ -0.09
CCNA1-201ENST00000255465 RGPD2P0DJD1 1756 aa14.49□□□□□ -0.09
CCNA1-201ENST00000255465 WDR17Q8IZU2 1322 aa14.49□□□□□ -0.09
CCNA1-201ENST00000255465 CRB1P82279 1406 aa14.49□□□□□ -0.09
CCNA1-201ENST00000255465 ATP2B3Q16720 1220 aa14.48□□□□□ -0.09
CCNA1-201ENST00000255465 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.48□□□□□ -0.09
CCNA1-201ENST00000255465 BLMP54132 1417 aaPredicted RBP14.48□□□□□ -0.09
CCNA1-201ENST00000255465 ONECUT3O60422 494 aaPredicted RBP14.48□□□□□ -0.09
CCNA1-201ENST00000255465 HOXC9P31274 260 aa14.48□□□□□ -0.09
CCNA1-201ENST00000255465 ZNF445P59923 1031 aa14.48□□□□□ -0.09
CCNA1-201ENST00000255465 ZNF710Q8N1W2 664 aa14.48□□□□□ -0.09
CCNA1-201ENST00000255465 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.48□□□□□ -0.09
CCNA1-201ENST00000255465 FAM208AQ9UK61 1670 aaKnown RBP14.47□□□□□ -0.09
CCNA1-201ENST00000255465 RTL1A6NKG5 1358 aa14.47□□□□□ -0.09
CCNA1-201ENST00000255465 WNK3Q9BYP7 1800 aa14.47□□□□□ -0.09
CCNA1-201ENST00000255465 FAM98CQ17RN3 349 aaKnown RBP14.47□□□□□ -0.09
CCNA1-201ENST00000255465 TOM1L2Q6ZVM7 507 aa14.47□□□□□ -0.09
CCNA1-201ENST00000255465 MORC1Q86VD1 984 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms