RNA–Protein interactions for RNA: ENST00000254940.9

NIP7-201, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIP7, Length 2,402 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-201ENST00000254940 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.71■□□□□ 0.11
NIP7-201ENST00000254940 DOT1LQ8TEK3 1739 aa15.71■□□□□ 0.11
NIP7-201ENST00000254940 ONECUT3O60422 494 aaPredicted RBP15.7■□□□□ 0.1
NIP7-201ENST00000254940 RRP1P56182 461 aaKnown RBP15.7■□□□□ 0.1
NIP7-201ENST00000254940 CABP4P57796 275 aa15.7■□□□□ 0.1
NIP7-201ENST00000254940 KCNQ4P56696 695 aa15.7■□□□□ 0.1
NIP7-201ENST00000254940 PPP4R2Q9NY27 417 aa15.7■□□□□ 0.1
NIP7-201ENST00000254940 DCAF5Q96JK2 942 aa15.69■□□□□ 0.1
NIP7-201ENST00000254940 TSHZ2Q9NRE2 1034 aa15.69■□□□□ 0.1
NIP7-201ENST00000254940 SCN11AQ9UI33 1791 aa15.69■□□□□ 0.1
NIP7-201ENST00000254940 TCERG1O14776 1098 aaKnown RBP15.69■□□□□ 0.1
NIP7-201ENST00000254940 BCAR3O75815 825 aa15.69■□□□□ 0.1
NIP7-201ENST00000254940 EXOC6Q8TAG9 804 aa15.69■□□□□ 0.1
NIP7-201ENST00000254940 TRIM37O94972 964 aa15.68■□□□□ 0.1
NIP7-201ENST00000254940 PIGBQ92521 554 aa15.68■□□□□ 0.1
NIP7-201ENST00000254940 ITGB4P16144 1822 aa15.68■□□□□ 0.1
NIP7-201ENST00000254940 LMOD3Q0VAK6 560 aa15.68■□□□□ 0.1
NIP7-201ENST00000254940 NECTIN2Q92692 538 aa15.68■□□□□ 0.1
NIP7-201ENST00000254940 MBIPQ9NS73 344 aa15.68■□□□□ 0.1
NIP7-201ENST00000254940 ASAP1Q9ULH1 1129 aa15.68■□□□□ 0.1
NIP7-201ENST00000254940 BTBD11A6QL63 1104 aa15.67■□□□□ 0.1
NIP7-201ENST00000254940 PTCD1O75127 700 aaKnown RBP15.67■□□□□ 0.1
NIP7-201ENST00000254940 SLC52A2Q9HAB3 445 aa15.67■□□□□ 0.1
NIP7-201ENST00000254940 TMOD3Q9NYL9 352 aa15.67■□□□□ 0.1
NIP7-201ENST00000254940 TSPYL4Q9UJ04 414 aa15.67■□□□□ 0.1
NIP7-201ENST00000254940 PRAMEF22A3QJZ6 481 aa15.67■□□□□ 0.1
NIP7-201ENST00000254940 BCL2L13Q9BXK5 485 aa15.67■□□□□ 0.1
NIP7-201ENST00000254940 TRMT2AQ8IZ69 625 aaKnown RBP15.66■□□□□ 0.1
NIP7-201ENST00000254940 TNNQ9UQP3 1299 aa15.65■□□□□ 0.1
NIP7-201ENST00000254940 CEMIPQ8WUJ3 1361 aa15.65■□□□□ 0.1
NIP7-201ENST00000254940 FANCIQ9NVI1 1328 aa15.65■□□□□ 0.1
NIP7-201ENST00000254940 HSP90AB1P08238 724 aaKnown RBP15.65■□□□□ 0.1
NIP7-201ENST00000254940 NKX1-1Q15270 411 aaPredicted RBP15.65■□□□□ 0.1
NIP7-201ENST00000254940 TAF7Q15545 349 aaPredicted RBP15.65■□□□□ 0.1
NIP7-201ENST00000254940 CCDC27Q2M243 656 aa15.65■□□□□ 0.1
NIP7-201ENST00000254940 TSPYL6Q8N831 410 aa15.64■□□□□ 0.09
NIP7-201ENST00000254940 RBM42Q9BTD8 480 aaKnown RBP15.64■□□□□ 0.09
NIP7-201ENST00000254940 EXOSC9Q06265 439 aaKnown RBP15.64■□□□□ 0.09
NIP7-201ENST00000254940 PIP4K2AP48426 406 aaPredicted RBP15.63■□□□□ 0.09
NIP7-201ENST00000254940 WDR63Q8IWG1 891 aa15.63■□□□□ 0.09
NIP7-201ENST00000254940 C8orf58Q8NAV2 365 aa15.63■□□□□ 0.09
NIP7-201ENST00000254940 HTATSF1O43719 755 aaKnown RBP15.62■□□□□ 0.09
NIP7-201ENST00000254940 CFAP44Q96MT7 982 aa15.62■□□□□ 0.09
NIP7-201ENST00000254940 SBF2Q86WG5 1849 aa15.62■□□□□ 0.09
NIP7-201ENST00000254940 ILDR2Q71H61 639 aa15.62■□□□□ 0.09
NIP7-201ENST00000254940 ATG3Q9NT62 314 aa15.62■□□□□ 0.09
NIP7-201ENST00000254940 ERVV-2B6SEH9 535 aa15.61■□□□□ 0.09
NIP7-201ENST00000254940 CHL1O00533 1208 aa15.61■□□□□ 0.09
NIP7-201ENST00000254940 GNAI1P63096 354 aa15.61■□□□□ 0.09
NIP7-201ENST00000254940 SKAP1Q86WV1 359 aa15.61■□□□□ 0.09
NIP7-201ENST00000254940 ZNF496Q96IT1 587 aaPredicted RBP15.61■□□□□ 0.09
NIP7-201ENST00000254940 CCDC136Q96JN2 1154 aa15.61■□□□□ 0.09
NIP7-201ENST00000254940 SIPA1L3O60292 1781 aaPredicted RBP15.61■□□□□ 0.09
NIP7-201ENST00000254940 IFT57Q9NWB7 429 aa15.6■□□□□ 0.09
NIP7-201ENST00000254940 E9PSI1 815 aa15.6■□□□□ 0.09
NIP7-201ENST00000254940 ZNF853P0CG23 659 aa15.6■□□□□ 0.09
NIP7-201ENST00000254940 EIF2S2P20042 333 aaKnown RBP15.6■□□□□ 0.09
NIP7-201ENST00000254940 FAM196AQ6ZSG2 479 aa15.6■□□□□ 0.09
NIP7-201ENST00000254940 TTC5Q8N0Z6 440 aa15.6■□□□□ 0.09
NIP7-201ENST00000254940 ZNF790Q6PG37 636 aa15.59■□□□□ 0.09
NIP7-201ENST00000254940 CRBNQ96SW2 442 aa15.59■□□□□ 0.09
NIP7-201ENST00000254940 BTAF1O14981 1849 aa15.59■□□□□ 0.09
NIP7-201ENST00000254940 ADAMTS7Q9UKP4 1686 aa15.59■□□□□ 0.09
NIP7-201ENST00000254940 ERICH6BQ5W0A0 696 aa15.59■□□□□ 0.09
NIP7-201ENST00000254940 SMIM5Q71RC9 77 aa15.59■□□□□ 0.09
NIP7-201ENST00000254940 BCL9O00512 1426 aa15.59■□□□□ 0.09
NIP7-201ENST00000254940 MYH16Q9H6N6 1097 aa15.58■□□□□ 0.09
NIP7-201ENST00000254940 ANXA1P04083 346 aa15.58■□□□□ 0.08
NIP7-201ENST00000254940 CALD1Q05682 793 aaKnown RBP15.58■□□□□ 0.08
NIP7-201ENST00000254940 SLC4A9Q96Q91 983 aa15.57■□□□□ 0.08
NIP7-201ENST00000254940 APBA3O96018 575 aa15.57■□□□□ 0.08
NIP7-201ENST00000254940 EIF4A1P60842 406 aaKnown RBP15.56■□□□□ 0.08
NIP7-201ENST00000254940 MRC1P22897 1456 aa15.56■□□□□ 0.08
NIP7-201ENST00000254940 KDM3BQ7LBC6 1761 aa15.56■□□□□ 0.08
NIP7-201ENST00000254940 DEFB132Q7Z7B7 95 aa15.56■□□□□ 0.08
NIP7-201ENST00000254940 NGEFQ8N5V2 710 aa15.56■□□□□ 0.08
NIP7-201ENST00000254940 ZNF330Q9Y3S2 320 aaPredicted RBP15.55■□□□□ 0.08
NIP7-201ENST00000254940 USP16Q9Y5T5 823 aa15.55■□□□□ 0.08
NIP7-201ENST00000254940 PALLDQ8WX93 1383 aa15.55■□□□□ 0.08
NIP7-201ENST00000254940 IL16Q14005 1332 aa15.55■□□□□ 0.08
NIP7-201ENST00000254940 TWISTNBQ3B726 338 aaPredicted RBP15.55■□□□□ 0.08
NIP7-201ENST00000254940 DNAJC10Q8IXB1 793 aa15.55■□□□□ 0.08
NIP7-201ENST00000254940 FRAT1Q92837 279 aaPredicted RBP15.55■□□□□ 0.08
NIP7-201ENST00000254940 ZNF428Q96B54 188 aa15.55■□□□□ 0.08
NIP7-201ENST00000254940 C5P01031 1676 aa15.54■□□□□ 0.08
NIP7-201ENST00000254940 NHSQ6T4R5 1651 aa15.54■□□□□ 0.08
NIP7-201ENST00000254940 BCL11BQ9C0K0 894 aaPredicted RBP15.54■□□□□ 0.08
NIP7-201ENST00000254940 ATP6V1AP38606 617 aa15.53■□□□□ 0.08
NIP7-201ENST00000254940 EN1Q05925 392 aaPredicted RBP15.53■□□□□ 0.08
NIP7-201ENST00000254940 PANK1Q8TE04 598 aa15.53■□□□□ 0.08
NIP7-201ENST00000254940 PLEKHG2Q9H7P9 1386 aa15.53■□□□□ 0.08
NIP7-201ENST00000254940 ITPK1Q13572 414 aa15.53■□□□□ 0.08
NIP7-201ENST00000254940 CLUAP1Q96AJ1 413 aa15.53■□□□□ 0.08
NIP7-201ENST00000254940 KCPQ6ZWJ8 1503 aa15.52■□□□□ 0.08
NIP7-201ENST00000254940 MYL6BP14649 208 aa15.52■□□□□ 0.08
NIP7-201ENST00000254940 FMNL2Q96PY5 1086 aa15.52■□□□□ 0.08
NIP7-201ENST00000254940 LOC102724428A0A0B4J2F2 783 aa15.52■□□□□ 0.07
NIP7-201ENST00000254940 RLBP1P12271 317 aa15.52■□□□□ 0.07
NIP7-201ENST00000254940 RARSP54136 660 aaKnown RBP15.52■□□□□ 0.07
NIP7-201ENST00000254940 SIK1P57059 783 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms