RNA–Protein interactions for RNA: ENST00000254325.8

RFX1-201, Transcript of regulatory factor X1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX1, Length 4,332 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-201ENST00000254325 GPATCH3Q96I76 525 aa19.26■□□□□ 0.67
RFX1-201ENST00000254325 ANP32BQ92688 251 aaKnown RBP19.26■□□□□ 0.67
RFX1-201ENST00000254325 RIC3Q7Z5B4 369 aa19.25■□□□□ 0.67
RFX1-201ENST00000254325 RABEP1Q15276 862 aa19.25■□□□□ 0.67
RFX1-201ENST00000254325 ANKARQ7Z5J8 1434 aa19.25■□□□□ 0.67
RFX1-201ENST00000254325 KIF13AQ9H1H9 1805 aa19.24■□□□□ 0.67
RFX1-201ENST00000254325 ERC2O15083 957 aa19.24■□□□□ 0.67
RFX1-201ENST00000254325 HSP90AB4PQ58FF6 505 aa19.24■□□□□ 0.67
RFX1-201ENST00000254325 LGR6Q9HBX8 967 aa19.24■□□□□ 0.67
RFX1-201ENST00000254325 OTUD7AQ8TE49 926 aaPredicted RBP19.24■□□□□ 0.67
RFX1-201ENST00000254325 CHPF2Q9P2E5 772 aa19.24■□□□□ 0.67
RFX1-201ENST00000254325 ZNF330Q9Y3S2 320 aaPredicted RBP19.24■□□□□ 0.67
RFX1-201ENST00000254325 KIF24Q5T7B8 1368 aa19.24■□□□□ 0.67
RFX1-201ENST00000254325 K7ELQ4 463 aaPredicted RBP19.24■□□□□ 0.67
RFX1-201ENST00000254325 AKAP4Q5JQC9 854 aa19.24■□□□□ 0.67
RFX1-201ENST00000254325 DNAAF4Q8WXU2 420 aa19.24■□□□□ 0.67
RFX1-201ENST00000254325 UBR1Q8IWV7 1749 aa19.23■□□□□ 0.67
RFX1-201ENST00000254325 TSHZ3Q63HK5 1081 aa19.23■□□□□ 0.67
RFX1-201ENST00000254325 PI4KAP2A4QPH2 592 aa19.23■□□□□ 0.67
RFX1-201ENST00000254325 PI4KAP1Q8N8J0 262 aa19.23■□□□□ 0.67
RFX1-201ENST00000254325 C19orf44Q9H6X5 657 aa19.23■□□□□ 0.67
RFX1-201ENST00000254325 PHAXQ9H814 394 aaKnown RBP19.23■□□□□ 0.67
RFX1-201ENST00000254325 SDSP20132 328 aa19.22■□□□□ 0.67
RFX1-201ENST00000254325 MX1P20591 662 aa19.22■□□□□ 0.67
RFX1-201ENST00000254325 SPG7Q9UQ90 795 aa19.22■□□□□ 0.67
RFX1-201ENST00000254325 IFIT2P09913 472 aaKnown RBP19.21■□□□□ 0.67
RFX1-201ENST00000254325 CHMP3Q9Y3E7 222 aa19.21■□□□□ 0.67
RFX1-201ENST00000254325 DBF4Q9UBU7 674 aaPredicted RBP19.21■□□□□ 0.67
RFX1-201ENST00000254325 DIP2AQ14689 1571 aa19.21■□□□□ 0.67
RFX1-201ENST00000254325 GOLGA6L3A6NEY3 463 aa19.21■□□□□ 0.67
RFX1-201ENST00000254325 RTL1A6NKG5 1358 aa19.21■□□□□ 0.67
RFX1-201ENST00000254325 NRXN3Q9Y4C0 1643 aa19.21■□□□□ 0.67
RFX1-201ENST00000254325 NUTM1Q86Y26 1132 aa19.21■□□□□ 0.67
RFX1-201ENST00000254325 MYL6BP14649 208 aa19.2■□□□□ 0.66
RFX1-201ENST00000254325 MCM4P33991 863 aa19.19■□□□□ 0.66
RFX1-201ENST00000254325 MAP4K4O95819 1239 aaPredicted RBP19.19■□□□□ 0.66
RFX1-201ENST00000254325 G3BP1Q13283 466 aaKnown RBP eCLIP19.19■□□□□ 0.66
RFX1-201ENST00000254325 CLASRPQ8N2M8 674 aaKnown RBP19.19■□□□□ 0.66
RFX1-201ENST00000254325 BABAM1Q9NWV8 329 aa19.19■□□□□ 0.66
RFX1-201ENST00000254325 ATP8B2P98198 1209 aa19.19■□□□□ 0.66
RFX1-201ENST00000254325 FOXD4L5Q5VV16 416 aaPredicted RBP19.19■□□□□ 0.66
RFX1-201ENST00000254325 FOXD4L4Q8WXT5 416 aaPredicted RBP19.19■□□□□ 0.66
RFX1-201ENST00000254325 DIAPH3Q9NSV4 1193 aa19.19■□□□□ 0.66
RFX1-201ENST00000254325 PTMSP20962 102 aa19.19■□□□□ 0.66
RFX1-201ENST00000254325 CHRNA2Q15822 529 aa19.19■□□□□ 0.66
RFX1-201ENST00000254325 PPP1R42Q7Z4L9 355 aa19.19■□□□□ 0.66
RFX1-201ENST00000254325 RBM42Q9BTD8 480 aaKnown RBP19.19■□□□□ 0.66
RFX1-201ENST00000254325 PDE1AP54750 535 aa19.18■□□□□ 0.66
RFX1-201ENST00000254325 EVA1CP58658 441 aa19.18■□□□□ 0.66
RFX1-201ENST00000254325 TPRNQ4KMQ1 711 aa19.18■□□□□ 0.66
RFX1-201ENST00000254325 NEK4P51957 841 aa19.18■□□□□ 0.66
RFX1-201ENST00000254325 NPHP4O75161 1426 aaPredicted RBP19.18■□□□□ 0.66
RFX1-201ENST00000254325 RBM25P49756 843 aaKnown RBP19.17■□□□□ 0.66
RFX1-201ENST00000254325 CABLES1Q8TDN4 633 aa19.17■□□□□ 0.66
RFX1-201ENST00000254325 SOS1Q07889 1333 aaPredicted RBP19.17■□□□□ 0.66
RFX1-201ENST00000254325 TRAK2O60296 914 aa19.17■□□□□ 0.66
RFX1-201ENST00000254325 RNMTO43148 476 aaKnown RBP19.16■□□□□ 0.66
RFX1-201ENST00000254325 PRDM11Q9NQV5 511 aa19.16■□□□□ 0.66
RFX1-201ENST00000254325 MAP3K2Q9Y2U5 619 aa19.16■□□□□ 0.66
RFX1-201ENST00000254325 GSPT1P15170 499 aaKnown RBP19.15■□□□□ 0.66
RFX1-201ENST00000254325 CADPS2Q86UW7 1296 aa19.15■□□□□ 0.66
RFX1-201ENST00000254325 SETD1BQ9UPS6 1966 aaKnown RBP19.15■□□□□ 0.66
RFX1-201ENST00000254325 KCNQ3O43525 872 aa19.15■□□□□ 0.66
RFX1-201ENST00000254325 CABP4P57796 275 aa19.15■□□□□ 0.66
RFX1-201ENST00000254325 CNTROBQ8N137 903 aa19.15■□□□□ 0.66
RFX1-201ENST00000254325 KIF1BPQ96EK5 621 aa19.15■□□□□ 0.66
RFX1-201ENST00000254325 FER1L4A9Z1Z3 1794 aa19.15■□□□□ 0.66
RFX1-201ENST00000254325 CRB1P82279 1406 aa19.15■□□□□ 0.66
RFX1-201ENST00000254325 SLIT1O75093 1534 aa19.15■□□□□ 0.66
RFX1-201ENST00000254325 TOM1L2Q6ZVM7 507 aa19.14■□□□□ 0.66
RFX1-201ENST00000254325 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.14■□□□□ 0.66
RFX1-201ENST00000254325 ARHGAP23Q9P227 1491 aa19.14■□□□□ 0.65
RFX1-201ENST00000254325 DDX17Q92841 729 aaKnown RBP19.14■□□□□ 0.65
RFX1-201ENST00000254325 PNMA6EA0A0J9YXQ4 647 aa19.14■□□□□ 0.65
RFX1-201ENST00000254325 RAB11FIP3O75154 756 aa19.14■□□□□ 0.65
RFX1-201ENST00000254325 EIF4A1P60842 406 aaKnown RBP19.14■□□□□ 0.65
RFX1-201ENST00000254325 CIZ1Q9ULV3 898 aaPredicted RBP19.14■□□□□ 0.65
RFX1-201ENST00000254325 SLC39A6Q13433 755 aa19.14■□□□□ 0.65
RFX1-201ENST00000254325 SNX21Q969T3 373 aa19.14■□□□□ 0.65
RFX1-201ENST00000254325 KDRP35968 1356 aa19.13■□□□□ 0.65
RFX1-201ENST00000254325 HSPA2P54652 639 aa19.13■□□□□ 0.65
RFX1-201ENST00000254325 NUCB2P80303 420 aa19.13■□□□□ 0.65
RFX1-201ENST00000254325 RUFY2Q8WXA3 655 aa19.13■□□□□ 0.65
RFX1-201ENST00000254325 CCDC9Q9Y3X0 531 aaKnown RBP19.13■□□□□ 0.65
RFX1-201ENST00000254325 DDX49Q9Y6V7 483 aaKnown RBP19.13■□□□□ 0.65
RFX1-201ENST00000254325 HYPKQ9NX55 129 aa19.12■□□□□ 0.65
RFX1-201ENST00000254325 ARHGEF25Q86VW2 580 aa19.12■□□□□ 0.65
RFX1-201ENST00000254325 SIL1Q9H173 461 aa19.12■□□□□ 0.65
RFX1-201ENST00000254325 STRN4Q9NRL3 753 aa19.12■□□□□ 0.65
RFX1-201ENST00000254325 KNDC1Q76NI1 1749 aa19.12■□□□□ 0.65
RFX1-201ENST00000254325 TRIM44Q96DX7 344 aaPredicted RBP19.11■□□□□ 0.65
RFX1-201ENST00000254325 BRPF3Q9ULD4 1205 aa19.11■□□□□ 0.65
RFX1-201ENST00000254325 SKOR2Q2VWA4 1001 aaPredicted RBP19.11■□□□□ 0.65
RFX1-201ENST00000254325 NPHP3Q7Z494 1330 aa19.11■□□□□ 0.65
RFX1-201ENST00000254325 ADGRL3Q9HAR2 1447 aa19.11■□□□□ 0.65
RFX1-201ENST00000254325 MON2Q7Z3U7 1717 aa19.1■□□□□ 0.65
RFX1-201ENST00000254325 ERC1Q8IUD2 1116 aa19.1■□□□□ 0.65
RFX1-201ENST00000254325 IFNL2Q8IZJ0 200 aa19.1■□□□□ 0.65
RFX1-201ENST00000254325 CEP170BQ9Y4F5 1589 aaPredicted RBP19.1■□□□□ 0.65
RFX1-201ENST00000254325 RHPN1Q8TCX5 695 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms