RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 ATP6V1AP38606 617 aa23.93■■□□□ 1.42
SNRPA1-201ENST00000254193 ITPK1Q13572 414 aa23.93■■□□□ 1.42
SNRPA1-201ENST00000254193 IL17REQ8NFR9 667 aa23.92■■□□□ 1.42
SNRPA1-201ENST00000254193 SLC4A9Q96Q91 983 aa23.92■■□□□ 1.42
SNRPA1-201ENST00000254193 SPON1Q9HCB6 807 aa23.92■■□□□ 1.42
SNRPA1-201ENST00000254193 ITGB4P16144 1822 aa23.91■■□□□ 1.42
SNRPA1-201ENST00000254193 PNPLA7Q6ZV29 1317 aa23.91■■□□□ 1.42
SNRPA1-201ENST00000254193 LY75O60449 1722 aa23.91■■□□□ 1.42
SNRPA1-201ENST00000254193 PTCD1O75127 700 aaKnown RBP23.91■■□□□ 1.42
SNRPA1-201ENST00000254193 LINC00116Q8NCU8 138 aa23.91■■□□□ 1.42
SNRPA1-201ENST00000254193 ATF5Q9Y2D1 282 aaPredicted RBP23.91■■□□□ 1.42
SNRPA1-201ENST00000254193 HMGB2P26583 209 aaKnown RBP23.89■■□□□ 1.41
SNRPA1-201ENST00000254193 SLC39A6Q13433 755 aa23.88■■□□□ 1.41
SNRPA1-201ENST00000254193 PLEKHF1Q96S99 279 aa23.88■■□□□ 1.41
SNRPA1-201ENST00000254193 AK7Q96M32 723 aa23.87■■□□□ 1.41
SNRPA1-201ENST00000254193 TEFQ10587 303 aa23.86■■□□□ 1.41
SNRPA1-201ENST00000254193 SMIM5Q71RC9 77 aa23.86■■□□□ 1.41
SNRPA1-201ENST00000254193 COL23A1Q86Y22 540 aaPredicted RBP23.86■■□□□ 1.41
SNRPA1-201ENST00000254193 MTFR1LQ9H019 292 aa23.86■■□□□ 1.41
SNRPA1-201ENST00000254193 MSH5O43196 834 aa23.85■■□□□ 1.41
SNRPA1-201ENST00000254193 NEFMP07197 916 aa23.85■■□□□ 1.41
SNRPA1-201ENST00000254193 AMIGO3Q86WK7 504 aa23.85■■□□□ 1.41
SNRPA1-201ENST00000254193 LRP5O75197 1615 aa23.84■■□□□ 1.41
SNRPA1-201ENST00000254193 MRC1P22897 1456 aa23.84■■□□□ 1.41
SNRPA1-201ENST00000254193 PTGER2P43116 358 aa23.84■■□□□ 1.41
SNRPA1-201ENST00000254193 MCM10Q7L590 875 aa23.84■■□□□ 1.41
SNRPA1-201ENST00000254193 RTF1Q92541 710 aaKnown RBP23.84■■□□□ 1.41
SNRPA1-201ENST00000254193 CASZ1Q86V15 1759 aa23.83■■□□□ 1.41
SNRPA1-201ENST00000254193 PNNQ9H307 717 aaKnown RBP23.83■■□□□ 1.41
SNRPA1-201ENST00000254193 CEMIPQ8WUJ3 1361 aa23.82■■□□□ 1.4
SNRPA1-201ENST00000254193 GNPATO15228 680 aa23.82■■□□□ 1.4
SNRPA1-201ENST00000254193 PHF14O94880 888 aa23.82■■□□□ 1.4
SNRPA1-201ENST00000254193 DCTN1Q14203 1278 aa23.82■■□□□ 1.4
SNRPA1-201ENST00000254193 SLC16A10Q8TF71 515 aa23.82■■□□□ 1.4
SNRPA1-201ENST00000254193 PPP1R1BQ9UD71 204 aaPredicted RBP23.82■■□□□ 1.4
SNRPA1-201ENST00000254193 MAPK8IP3Q9UPT6 1336 aa23.81■■□□□ 1.4
SNRPA1-201ENST00000254193 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.8■■□□□ 1.4
SNRPA1-201ENST00000254193 HTATSF1O43719 755 aaKnown RBP23.8■■□□□ 1.4
SNRPA1-201ENST00000254193 WDR43Q15061 677 aaKnown RBP eCLIP23.8■■□□□ 1.4
SNRPA1-201ENST00000254193 NFE2L2Q16236 605 aa23.8■■□□□ 1.4
SNRPA1-201ENST00000254193 FLAD1Q8NFF5 587 aa23.8■■□□□ 1.4
SNRPA1-201ENST00000254193 SCN11AQ9UI33 1791 aa23.8■■□□□ 1.4
SNRPA1-201ENST00000254193 SGIP1Q9BQI5 828 aa23.79■■□□□ 1.4
SNRPA1-201ENST00000254193 C5P01031 1676 aa23.79■■□□□ 1.4
SNRPA1-201ENST00000254193 ADAMTS7Q9UKP4 1686 aa23.79■■□□□ 1.4
SNRPA1-201ENST00000254193 DNAJC10Q8IXB1 793 aa23.78■■□□□ 1.4
SNRPA1-201ENST00000254193 TTC5Q8N0Z6 440 aa23.78■■□□□ 1.4
SNRPA1-201ENST00000254193 ADAMTS8Q9UP79 889 aa23.78■■□□□ 1.4
SNRPA1-201ENST00000254193 C4BP0C0L5 1744 aa23.78■■□□□ 1.4
SNRPA1-201ENST00000254193 RC3H1Q5TC82 1133 aaKnown RBP23.77■■□□□ 1.4
SNRPA1-201ENST00000254193 ZNF790Q6PG37 636 aa23.77■■□□□ 1.4
SNRPA1-201ENST00000254193 CCDC146Q8IYE0 955 aa23.77■■□□□ 1.4
SNRPA1-201ENST00000254193 BTBD11A6QL63 1104 aa23.76■■□□□ 1.39
SNRPA1-201ENST00000254193 SSFA2P28290 1259 aa23.76■■□□□ 1.39
SNRPA1-201ENST00000254193 MSL1Q68DK7 614 aa23.76■■□□□ 1.39
SNRPA1-201ENST00000254193 CNTNAP4Q9C0A0 1308 aa23.76■■□□□ 1.39
SNRPA1-201ENST00000254193 ANP32CO43423 234 aa23.75■■□□□ 1.39
SNRPA1-201ENST00000254193 KCNQ3O43525 872 aa23.75■■□□□ 1.39
SNRPA1-201ENST00000254193 CRKLP46109 303 aaKnown RBP23.75■■□□□ 1.39
SNRPA1-201ENST00000254193 CCDC184Q52MB2 194 aa23.75■■□□□ 1.39
SNRPA1-201ENST00000254193 ZNF496Q96IT1 587 aaPredicted RBP23.75■■□□□ 1.39
SNRPA1-201ENST00000254193 RTCBQ9Y3I0 505 aaKnown RBP23.75■■□□□ 1.39
SNRPA1-201ENST00000254193 THUMPD2Q9BTF0 503 aaKnown RBP23.74■■□□□ 1.39
SNRPA1-201ENST00000254193 RPS6KA4O75676 772 aa23.73■■□□□ 1.39
SNRPA1-201ENST00000254193 KCPQ6ZWJ8 1503 aa23.73■■□□□ 1.39
SNRPA1-201ENST00000254193 POLD1P28340 1107 aa23.72■■□□□ 1.39
SNRPA1-201ENST00000254193 RIPK4P57078 832 aa23.72■■□□□ 1.39
SNRPA1-201ENST00000254193 TRAPPC3LQ5T215 181 aa23.72■■□□□ 1.39
SNRPA1-201ENST00000254193 INTS5Q6P9B9 1019 aaKnown RBP23.72■■□□□ 1.39
SNRPA1-201ENST00000254193 VSIG10Q8N0Z9 540 aa23.72■■□□□ 1.39
SNRPA1-201ENST00000254193 ARXQ96QS3 562 aa23.72■■□□□ 1.39
SNRPA1-201ENST00000254193 RRP7AQ9Y3A4 280 aaKnown RBP23.72■■□□□ 1.39
SNRPA1-201ENST00000254193 TAF1LQ8IZX4 1826 aa23.71■■□□□ 1.39
SNRPA1-201ENST00000254193 CYP19A1P11511 503 aaPredicted RBP23.71■■□□□ 1.39
SNRPA1-201ENST00000254193 TMPOP42166 694 aaKnown RBP23.71■■□□□ 1.39
SNRPA1-201ENST00000254193 TAF7Q15545 349 aaPredicted RBP23.71■■□□□ 1.39
SNRPA1-201ENST00000254193 RUNDC1Q96C34 613 aa23.71■■□□□ 1.39
SNRPA1-201ENST00000254193 MIS18AQ9NYP9 233 aa23.71■■□□□ 1.39
SNRPA1-201ENST00000254193 ARHGEF1Q92888 912 aaKnown RBP23.7■■□□□ 1.38
SNRPA1-201ENST00000254193 FMNL2Q96PY5 1086 aa23.7■■□□□ 1.38
SNRPA1-201ENST00000254193 CCDC87Q9NVE4 849 aa23.7■■□□□ 1.38
SNRPA1-201ENST00000254193 TUBGCP6Q96RT7 1819 aa23.69■■□□□ 1.38
SNRPA1-201ENST00000254193 NEUROD2Q15784 382 aa23.69■■□□□ 1.38
SNRPA1-201ENST00000254193 HEG1Q9ULI3 1381 aa23.68■■□□□ 1.38
SNRPA1-201ENST00000254193 ADRA2BP18089 450 aa23.68■■□□□ 1.38
SNRPA1-201ENST00000254193 FHDC1Q9C0D6 1143 aaPredicted RBP23.68■■□□□ 1.38
SNRPA1-201ENST00000254193 QSER1Q2KHR3 1735 aa23.67■■□□□ 1.38
SNRPA1-201ENST00000254193 ZNF831Q5JPB2 1677 aa23.67■■□□□ 1.38
SNRPA1-201ENST00000254193 STARD3NLO95772 234 aa23.66■■□□□ 1.38
SNRPA1-201ENST00000254193 RFC4P35249 363 aa23.66■■□□□ 1.38
SNRPA1-201ENST00000254193 ZBTB1Q9Y2K1 713 aa23.66■■□□□ 1.38
SNRPA1-201ENST00000254193 CANXP27824 592 aaKnown RBP23.64■■□□□ 1.37
SNRPA1-201ENST00000254193 SYT17Q9BSW7 474 aa23.64■■□□□ 1.37
SNRPA1-201ENST00000254193 TEX13AQ9BXU3 409 aaPredicted RBP23.64■■□□□ 1.37
SNRPA1-201ENST00000254193 MRS2Q9HD23 443 aa23.64■■□□□ 1.37
SNRPA1-201ENST00000254193 TJP1Q07157 1748 aa23.64■■□□□ 1.37
SNRPA1-201ENST00000254193 SOS1Q07889 1333 aaPredicted RBP23.63■■□□□ 1.37
SNRPA1-201ENST00000254193 PRAMEF22A3QJZ6 481 aa23.63■■□□□ 1.37
SNRPA1-201ENST00000254193 LMOD3Q0VAK6 560 aa23.63■■□□□ 1.37
SNRPA1-201ENST00000254193 KLHL34Q8N239 644 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms