RNA–Protein interactions for RNA: ENST00000249289.4

ATP6V1F-201, Transcript of ATPase H+ transporting V1 subunit F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATP6V1F, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1F-201ENST00000249289 NEUROD2Q15784 382 aa19.95■□□□□ 0.78
ATP6V1F-201ENST00000249289 MCM10Q7L590 875 aa19.95■□□□□ 0.78
ATP6V1F-201ENST00000249289 PAPPAQ13219 1627 aa19.94■□□□□ 0.78
ATP6V1F-201ENST00000249289 NFATC2IPQ8NCF5 419 aa19.94■□□□□ 0.78
ATP6V1F-201ENST00000249289 LY75O60449 1722 aa19.93■□□□□ 0.78
ATP6V1F-201ENST00000249289 PLSCR1O15162 318 aa19.93■□□□□ 0.78
ATP6V1F-201ENST00000249289 DCTN1Q14203 1278 aa19.93■□□□□ 0.78
ATP6V1F-201ENST00000249289 NCBP3Q53F19 620 aaKnown RBP19.93■□□□□ 0.78
ATP6V1F-201ENST00000249289 SMARCC1Q92922 1105 aaPredicted RBP19.92■□□□□ 0.78
ATP6V1F-201ENST00000249289 PALLDQ8WX93 1383 aa19.92■□□□□ 0.78
ATP6V1F-201ENST00000249289 RREB1Q92766 1687 aa19.91■□□□□ 0.78
ATP6V1F-201ENST00000249289 NGEFQ8N5V2 710 aa19.91■□□□□ 0.78
ATP6V1F-201ENST00000249289 TRIM35Q9UPQ4 493 aa19.91■□□□□ 0.78
ATP6V1F-201ENST00000249289 CCDC27Q2M243 656 aa19.9■□□□□ 0.78
ATP6V1F-201ENST00000249289 DEFB132Q7Z7B7 95 aa19.9■□□□□ 0.78
ATP6V1F-201ENST00000249289 EN1Q05925 392 aaPredicted RBP19.89■□□□□ 0.77
ATP6V1F-201ENST00000249289 THUMPD2Q9BTF0 503 aaKnown RBP19.89■□□□□ 0.77
ATP6V1F-201ENST00000249289 UBR2Q8IWV8 1755 aa19.88■□□□□ 0.77
ATP6V1F-201ENST00000249289 CAMKK2Q96RR4 588 aa19.88■□□□□ 0.77
ATP6V1F-201ENST00000249289 ATG3Q9NT62 314 aa19.88■□□□□ 0.77
ATP6V1F-201ENST00000249289 ASAP1Q9ULH1 1129 aa19.88■□□□□ 0.77
ATP6V1F-201ENST00000249289 ZNF831Q5JPB2 1677 aa19.87■□□□□ 0.77
ATP6V1F-201ENST00000249289 CALD1Q05682 793 aaKnown RBP19.87■□□□□ 0.77
ATP6V1F-201ENST00000249289 TAF7Q15545 349 aaPredicted RBP19.87■□□□□ 0.77
ATP6V1F-201ENST00000249289 KDM3BQ7LBC6 1761 aa19.87■□□□□ 0.77
ATP6V1F-201ENST00000249289 NUP188Q5SRE5 1749 aa19.86■□□□□ 0.77
ATP6V1F-201ENST00000249289 BTBD11A6QL63 1104 aa19.86■□□□□ 0.77
ATP6V1F-201ENST00000249289 TTC5Q8N0Z6 440 aa19.86■□□□□ 0.77
ATP6V1F-201ENST00000249289 CICQ96RK0 1608 aaPredicted RBP19.86■□□□□ 0.77
ATP6V1F-201ENST00000249289 KCPQ6ZWJ8 1503 aa19.86■□□□□ 0.77
ATP6V1F-201ENST00000249289 EZH2Q15910 746 aaKnown RBP19.85■□□□□ 0.77
ATP6V1F-201ENST00000249289 TXNRD1Q16881 649 aa19.85■□□□□ 0.77
ATP6V1F-201ENST00000249289 SLC27A3Q5K4L6 730 aa19.85■□□□□ 0.77
ATP6V1F-201ENST00000249289 ZNF790Q6PG37 636 aa19.84■□□□□ 0.77
ATP6V1F-201ENST00000249289 WWC1Q8IX03 1113 aa19.84■□□□□ 0.77
ATP6V1F-201ENST00000249289 BABAM1Q9NWV8 329 aa19.84■□□□□ 0.77
ATP6V1F-201ENST00000249289 SENP3-EIF4A1A0A087X0R7 540 aa19.83■□□□□ 0.77
ATP6V1F-201ENST00000249289 LOC102724428A0A0B4J2F2 783 aa19.83■□□□□ 0.77
ATP6V1F-201ENST00000249289 SIK1P57059 783 aa19.83■□□□□ 0.77
ATP6V1F-201ENST00000249289 SLC39A6Q13433 755 aa19.83■□□□□ 0.77
ATP6V1F-201ENST00000249289 CCNL1Q9UK58 526 aaPredicted RBP19.83■□□□□ 0.77
ATP6V1F-201ENST00000249289 C5P01031 1676 aa19.82■□□□□ 0.76
ATP6V1F-201ENST00000249289 HMGB2P26583 209 aaKnown RBP19.82■□□□□ 0.76
ATP6V1F-201ENST00000249289 PROM2Q8N271 834 aa19.82■□□□□ 0.76
ATP6V1F-201ENST00000249289 RBM42Q9BTD8 480 aaKnown RBP19.81■□□□□ 0.76
ATP6V1F-201ENST00000249289 TJP1Q07157 1748 aa19.81■□□□□ 0.76
ATP6V1F-201ENST00000249289 TAF1LQ8IZX4 1826 aa19.81■□□□□ 0.76
ATP6V1F-201ENST00000249289 PTCD1O75127 700 aaKnown RBP19.8■□□□□ 0.76
ATP6V1F-201ENST00000249289 CFAP44Q96MT7 982 aa19.8■□□□□ 0.76
ATP6V1F-201ENST00000249289 IFT57Q9NWB7 429 aa19.8■□□□□ 0.76
ATP6V1F-201ENST00000249289 TSPYL4Q9UJ04 414 aa19.8■□□□□ 0.76
ATP6V1F-201ENST00000249289 SALL2Q9Y467 1007 aaPredicted RBP19.8■□□□□ 0.76
ATP6V1F-201ENST00000249289 IL16Q14005 1332 aa19.79■□□□□ 0.76
ATP6V1F-201ENST00000249289 GNAI1P63096 354 aa19.79■□□□□ 0.76
ATP6V1F-201ENST00000249289 WDR63Q8IWG1 891 aa19.79■□□□□ 0.76
ATP6V1F-201ENST00000249289 FMNL2Q96PY5 1086 aa19.79■□□□□ 0.76
ATP6V1F-201ENST00000249289 LRRC4BQ9NT99 713 aa19.79■□□□□ 0.76
ATP6V1F-201ENST00000249289 HEG1Q9ULI3 1381 aa19.79■□□□□ 0.76
ATP6V1F-201ENST00000249289 COL5A3P25940 1745 aaPredicted RBP19.79■□□□□ 0.76
ATP6V1F-201ENST00000249289 CHL1O00533 1208 aa19.78■□□□□ 0.76
ATP6V1F-201ENST00000249289 KCNQ3O43525 872 aa19.78■□□□□ 0.76
ATP6V1F-201ENST00000249289 ATP6V1AP38606 617 aa19.78■□□□□ 0.76
ATP6V1F-201ENST00000249289 VSIG10Q8N0Z9 540 aa19.78■□□□□ 0.76
ATP6V1F-201ENST00000249289 ZNF496Q96IT1 587 aaPredicted RBP19.78■□□□□ 0.76
ATP6V1F-201ENST00000249289 MIS18AQ9NYP9 233 aa19.78■□□□□ 0.76
ATP6V1F-201ENST00000249289 ZNF521Q96K83 1311 aa19.77■□□□□ 0.76
ATP6V1F-201ENST00000249289 ZNF853P0CG23 659 aa19.77■□□□□ 0.76
ATP6V1F-201ENST00000249289 SLC4A9Q96Q91 983 aa19.77■□□□□ 0.76
ATP6V1F-201ENST00000249289 LAS1LQ9Y4W2 734 aaKnown RBP19.77■□□□□ 0.76
ATP6V1F-201ENST00000249289 C4BP0C0L5 1744 aa19.76■□□□□ 0.75
ATP6V1F-201ENST00000249289 LAMB4A4D0S4 1761 aa19.75■□□□□ 0.75
ATP6V1F-201ENST00000249289 KCNQ4P56696 695 aa19.75■□□□□ 0.75
ATP6V1F-201ENST00000249289 ITPK1Q13572 414 aa19.75■□□□□ 0.75
ATP6V1F-201ENST00000249289 EIF4A1P60842 406 aaKnown RBP19.74■□□□□ 0.75
ATP6V1F-201ENST00000249289 HNRNPUQ00839 825 aaKnown RBP eCLIP19.74■□□□□ 0.75
ATP6V1F-201ENST00000249289 MBIPQ9NS73 344 aa19.74■□□□□ 0.75
ATP6V1F-201ENST00000249289 SNRPA1P09661 255 aaKnown RBP19.73■□□□□ 0.75
ATP6V1F-201ENST00000249289 NBPF14Q5TI25 921 aa19.73■□□□□ 0.75
ATP6V1F-201ENST00000249289 LINC00116Q8NCU8 138 aa19.73■□□□□ 0.75
ATP6V1F-201ENST00000249289 TEX13AQ9BXU3 409 aaPredicted RBP19.73■□□□□ 0.75
ATP6V1F-201ENST00000249289 DNAJC10Q8IXB1 793 aa19.72■□□□□ 0.75
ATP6V1F-201ENST00000249289 CNTNAP4Q9C0A0 1308 aa19.72■□□□□ 0.75
ATP6V1F-201ENST00000249289 ANO8Q9HCE9 1232 aaPredicted RBP19.71■□□□□ 0.75
ATP6V1F-201ENST00000249289 STK32BQ9NY57 414 aa19.71■□□□□ 0.75
ATP6V1F-201ENST00000249289 QSER1Q2KHR3 1735 aa19.71■□□□□ 0.75
ATP6V1F-201ENST00000249289 STARD3NLO95772 234 aa19.7■□□□□ 0.74
ATP6V1F-201ENST00000249289 GOLGA2Q08379 1002 aa19.7■□□□□ 0.74
ATP6V1F-201ENST00000249289 MYH16Q9H6N6 1097 aa19.7■□□□□ 0.74
ATP6V1F-201ENST00000249289 GIGYF1O75420 1035 aaPredicted RBP19.69■□□□□ 0.74
ATP6V1F-201ENST00000249289 ZNF827Q17R98 1081 aa19.69■□□□□ 0.74
ATP6V1F-201ENST00000249289 RC3H1Q5TC82 1133 aaKnown RBP19.69■□□□□ 0.74
ATP6V1F-201ENST00000249289 AKT1S1Q96B36 256 aa19.69■□□□□ 0.74
ATP6V1F-201ENST00000249289 AK7Q96M32 723 aa19.69■□□□□ 0.74
ATP6V1F-201ENST00000249289 FANCIQ9NVI1 1328 aa19.69■□□□□ 0.74
ATP6V1F-201ENST00000249289 TUBGCP6Q96RT7 1819 aa19.68■□□□□ 0.74
ATP6V1F-201ENST00000249289 HOXB7P09629 217 aa19.68■□□□□ 0.74
ATP6V1F-201ENST00000249289 CYP19A1P11511 503 aaPredicted RBP19.68■□□□□ 0.74
ATP6V1F-201ENST00000249289 SLC15A2Q16348 729 aa19.68■□□□□ 0.74
ATP6V1F-201ENST00000249289 TSR2Q969E8 191 aaKnown RBP19.68■□□□□ 0.74
ATP6V1F-201ENST00000249289 UBR3Q6ZT12 1888 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms