RNA–Protein interactions for RNA: ENST00000248594.10

PTPN12-201, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN12, Length 3,406 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-201ENST00000248594 PTPN14Q15678 1187 aa21.8■■□□□ 1.08
PTPN12-201ENST00000248594 TWISTNBQ3B726 338 aaPredicted RBP21.8■■□□□ 1.08
PTPN12-201ENST00000248594 ARAP3Q8WWN8 1544 aa21.8■■□□□ 1.08
PTPN12-201ENST00000248594 GYS2P54840 703 aa21.79■■□□□ 1.08
PTPN12-201ENST00000248594 CFAP44Q96MT7 982 aa21.79■■□□□ 1.08
PTPN12-201ENST00000248594 RAD51AP2Q09MP3 1159 aa21.79■■□□□ 1.08
PTPN12-201ENST00000248594 ANO6Q4KMQ2 910 aa21.79■■□□□ 1.08
PTPN12-201ENST00000248594 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.79■■□□□ 1.08
PTPN12-201ENST00000248594 CROCC2H7BZ55 1655 aa21.79■■□□□ 1.08
PTPN12-201ENST00000248594 SECISBP2LQ93073 1101 aaKnown RBP21.78■■□□□ 1.08
PTPN12-201ENST00000248594 DCTPP1Q9H773 170 aa21.78■■□□□ 1.08
PTPN12-201ENST00000248594 FEZ2Q9UHY8 353 aaPredicted RBP21.78■■□□□ 1.08
PTPN12-201ENST00000248594 CACTINQ8WUQ7 758 aaKnown RBP21.78■■□□□ 1.08
PTPN12-201ENST00000248594 TRIM66O15016 1216 aa21.78■■□□□ 1.08
PTPN12-201ENST00000248594 ERCC6LQ2NKX8 1250 aa21.78■■□□□ 1.08
PTPN12-201ENST00000248594 PLPPR3Q6T4P5 718 aa21.78■■□□□ 1.08
PTPN12-201ENST00000248594 VAMP4O75379 141 aa21.77■■□□□ 1.08
PTPN12-201ENST00000248594 ZSCAN25Q6NSZ9 544 aa21.77■■□□□ 1.08
PTPN12-201ENST00000248594 RBM6P78332 1123 aaKnown RBP21.77■■□□□ 1.08
PTPN12-201ENST00000248594 SKIDA1Q1XH10 827 aa21.77■■□□□ 1.08
PTPN12-201ENST00000248594 ABCC11Q96J66 1382 aa21.77■■□□□ 1.08
PTPN12-201ENST00000248594 TFIP11Q9UBB9 837 aaKnown RBP21.77■■□□□ 1.07
PTPN12-201ENST00000248594 STX6O43752 255 aa21.76■■□□□ 1.07
PTPN12-201ENST00000248594 SYT1P21579 422 aa21.76■■□□□ 1.07
PTPN12-201ENST00000248594 ALDH1L2Q3SY69 923 aa21.76■■□□□ 1.07
PTPN12-201ENST00000248594 CCDC83Q8IWF9 413 aa21.76■■□□□ 1.07
PTPN12-201ENST00000248594 ZSCAN22P10073 491 aaPredicted RBP21.76■■□□□ 1.07
PTPN12-201ENST00000248594 KRBA2Q6ZNG9 492 aa21.76■■□□□ 1.07
PTPN12-201ENST00000248594 GPATCH11Q8N954 259 aa21.76■■□□□ 1.07
PTPN12-201ENST00000248594 DIAPH1O60610 1272 aaKnown RBP21.76■■□□□ 1.07
PTPN12-201ENST00000248594 C8orf58Q8NAV2 365 aa21.76■■□□□ 1.07
PTPN12-201ENST00000248594 PAXBP1Q9Y5B6 917 aa21.76■■□□□ 1.07
PTPN12-201ENST00000248594 ARHGEF5Q12774 1597 aa21.75■■□□□ 1.07
PTPN12-201ENST00000248594 A0A087WWV3 80 aa21.75■■□□□ 1.07
PTPN12-201ENST00000248594 ZCCHC17Q9NP64 241 aaKnown RBP21.75■■□□□ 1.07
PTPN12-201ENST00000248594 BRD2P25440 801 aaKnown RBP21.74■■□□□ 1.07
PTPN12-201ENST00000248594 MCM2P49736 904 aa21.74■■□□□ 1.07
PTPN12-201ENST00000248594 TYRO3Q06418 890 aa21.74■■□□□ 1.07
PTPN12-201ENST00000248594 MEIS3Q99687 375 aa21.74■■□□□ 1.07
PTPN12-201ENST00000248594 DNAJC25Q9H1X3 360 aa21.74■■□□□ 1.07
PTPN12-201ENST00000248594 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.74■■□□□ 1.07
PTPN12-201ENST00000248594 FAM200AQ8TCP9 573 aa21.74■■□□□ 1.07
PTPN12-201ENST00000248594 NUP62CLQ9H1M0 184 aa21.74■■□□□ 1.07
PTPN12-201ENST00000248594 TNMDQ9H2S6 317 aa21.74■■□□□ 1.07
PTPN12-201ENST00000248594 FAM83GA6ND36 823 aa21.74■■□□□ 1.07
PTPN12-201ENST00000248594 MAP3K11Q16584 847 aa21.74■■□□□ 1.07
PTPN12-201ENST00000248594 NOS1P29475 1434 aa21.73■■□□□ 1.07
PTPN12-201ENST00000248594 CD109Q6YHK3 1445 aa21.73■■□□□ 1.07
PTPN12-201ENST00000248594 ZNF428Q96B54 188 aa21.73■■□□□ 1.07
PTPN12-201ENST00000248594 CCDC144BQ3MJ40 725 aa21.73■■□□□ 1.07
PTPN12-201ENST00000248594 CCDC144CPQ8IYA2 1237 aa21.73■■□□□ 1.07
PTPN12-201ENST00000248594 FANCAO15360 1455 aa21.73■■□□□ 1.07
PTPN12-201ENST00000248594 SYT10Q6XYQ8 523 aa21.73■■□□□ 1.07
PTPN12-201ENST00000248594 API5Q9BZZ5 524 aaKnown RBP21.73■■□□□ 1.07
PTPN12-201ENST00000248594 CBX8Q9HC52 389 aa21.73■■□□□ 1.07
PTPN12-201ENST00000248594 LIG1P18858 919 aa21.72■■□□□ 1.07
PTPN12-201ENST00000248594 ESYT1Q9BSJ8 1104 aa21.72■■□□□ 1.07
PTPN12-201ENST00000248594 USP16Q9Y5T5 823 aa21.72■■□□□ 1.07
PTPN12-201ENST00000248594 SHANK2Q9UPX8 1470 aa21.72■■□□□ 1.07
PTPN12-201ENST00000248594 CEBPZQ03701 1054 aaKnown RBP21.71■■□□□ 1.07
PTPN12-201ENST00000248594 PHACTR3Q96KR7 559 aa21.71■■□□□ 1.07
PTPN12-201ENST00000248594 APPP05067 770 aa21.71■■□□□ 1.07
PTPN12-201ENST00000248594 SKILP12757 684 aa21.71■■□□□ 1.07
PTPN12-201ENST00000248594 CCDC34Q96HJ3 373 aa21.71■■□□□ 1.07
PTPN12-201ENST00000248594 PLEKHF1Q96S99 279 aa21.71■■□□□ 1.07
PTPN12-201ENST00000248594 CFAP74Q9C0B2 1584 aa21.71■■□□□ 1.07
PTPN12-201ENST00000248594 LOC102724159A0A0B4J2E5 919 aa21.71■■□□□ 1.07
PTPN12-201ENST00000248594 GOLGA6L19H0YKK7 550 aa21.71■■□□□ 1.07
PTPN12-201ENST00000248594 HTATSF1O43719 755 aaKnown RBP21.71■■□□□ 1.07
PTPN12-201ENST00000248594 GTF2A1P52655 376 aaPredicted RBP21.71■■□□□ 1.07
PTPN12-201ENST00000248594 PDE1AP54750 535 aa21.71■■□□□ 1.07
PTPN12-201ENST00000248594 PWP2Q15269 919 aaKnown RBP21.71■■□□□ 1.07
PTPN12-201ENST00000248594 CCDC191Q8NCU4 936 aa21.71■■□□□ 1.07
PTPN12-201ENST00000248594 BICD2Q8TD16 824 aa21.71■■□□□ 1.07
PTPN12-201ENST00000248594 DACT1Q9NYF0 836 aa21.71■■□□□ 1.07
PTPN12-201ENST00000248594 ABCC1P33527 1531 aa21.71■■□□□ 1.07
PTPN12-201ENST00000248594 F13A1P00488 732 aa21.7■■□□□ 1.06
PTPN12-201ENST00000248594 TEX35Q5T0J7 233 aa21.7■■□□□ 1.06
PTPN12-201ENST00000248594 MBIPQ9NS73 344 aa21.7■■□□□ 1.06
PTPN12-201ENST00000248594 CUL4AQ13619 759 aa21.7■■□□□ 1.06
PTPN12-201ENST00000248594 FAM177A1Q8N128 213 aaPredicted RBP21.7■■□□□ 1.06
PTPN12-201ENST00000248594 LRRFIP2Q9Y608 721 aaKnown RBP21.7■■□□□ 1.06
PTPN12-201ENST00000248594 GLI2P10070 1586 aa21.7■■□□□ 1.06
PTPN12-201ENST00000248594 FOSBP53539 338 aa21.7■■□□□ 1.06
PTPN12-201ENST00000248594 GNL2Q13823 731 aaKnown RBP21.7■■□□□ 1.06
PTPN12-201ENST00000248594 NECAB1Q8N987 351 aa21.7■■□□□ 1.06
PTPN12-201ENST00000248594 RGS22Q8NE09 1264 aa21.7■■□□□ 1.06
PTPN12-201ENST00000248594 DIP2BQ9P265 1576 aa21.69■■□□□ 1.06
PTPN12-201ENST00000248594 BMS1Q14692 1282 aaKnown RBP21.69■■□□□ 1.06
PTPN12-201ENST00000248594 HOMER1Q86YM7 354 aa21.69■■□□□ 1.06
PTPN12-201ENST00000248594 LRRN4CLQ8ND94 238 aa21.69■■□□□ 1.06
PTPN12-201ENST00000248594 IL1RAPL2Q9NP60 686 aa21.69■■□□□ 1.06
PTPN12-201ENST00000248594 ERVK-7P63135 1459 aa21.69■■□□□ 1.06
PTPN12-201ENST00000248594 MAP3K4Q9Y6R4 1608 aa21.69■■□□□ 1.06
PTPN12-201ENST00000248594 ZNF165P49910 485 aa21.69■■□□□ 1.06
PTPN12-201ENST00000248594 RASSF4Q9H2L5 321 aa21.69■■□□□ 1.06
PTPN12-201ENST00000248594 ZRANB1Q9UGI0 708 aa21.69■■□□□ 1.06
PTPN12-201ENST00000248594 TCHHQ07283 1943 aa21.69■■□□□ 1.06
PTPN12-201ENST00000248594 IQSEC2Q5JU85 1478 aa21.69■■□□□ 1.06
PTPN12-201ENST00000248594 KANK1Q14678 1352 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 123.6 ms