RNA–Protein interactions for RNA: ENST00000248437.8

TUBA4A-201, Transcript of tubulin alpha 4a, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA4A, Length 2,162 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4A-201ENST00000248437 UPF2Q9HAU5 1272 aaKnown RBP23.28■■□□□ 1.32
TUBA4A-201ENST00000248437 RPAP2Q8IXW5 612 aaPredicted RBP23.28■■□□□ 1.32
TUBA4A-201ENST00000248437 LNPKQ9C0E8 428 aa23.28■■□□□ 1.32
TUBA4A-201ENST00000248437 AXIN2Q9Y2T1 843 aa23.28■■□□□ 1.32
TUBA4A-201ENST00000248437 ROBO1Q9Y6N7 1651 aa23.27■■□□□ 1.32
TUBA4A-201ENST00000248437 COL18A1P39060 1754 aa23.27■■□□□ 1.32
TUBA4A-201ENST00000248437 G2E3Q7L622 706 aa23.27■■□□□ 1.32
TUBA4A-201ENST00000248437 ZNF530Q6P9A1 599 aaPredicted RBP23.27■■□□□ 1.32
TUBA4A-201ENST00000248437 ANKRD44Q8N8A2 993 aa23.27■■□□□ 1.32
TUBA4A-201ENST00000248437 ANKRD45Q5TZF3 282 aa23.26■■□□□ 1.31
TUBA4A-201ENST00000248437 ERBB3P21860 1342 aa23.26■■□□□ 1.31
TUBA4A-201ENST00000248437 ADAMTS7Q9UKP4 1686 aa23.26■■□□□ 1.31
TUBA4A-201ENST00000248437 HOXB7P09629 217 aa23.25■■□□□ 1.31
TUBA4A-201ENST00000248437 CHMP4AQ9BY43 222 aa23.25■■□□□ 1.31
TUBA4A-201ENST00000248437 DCTPP1Q9H773 170 aa23.25■■□□□ 1.31
TUBA4A-201ENST00000248437 PXDNLA1KZ92 1463 aa23.25■■□□□ 1.31
TUBA4A-201ENST00000248437 SIPA1L3O60292 1781 aaPredicted RBP23.24■■□□□ 1.31
TUBA4A-201ENST00000248437 FLIIQ13045 1269 aa23.24■■□□□ 1.31
TUBA4A-201ENST00000248437 LGR6Q9HBX8 967 aa23.24■■□□□ 1.31
TUBA4A-201ENST00000248437 C1orf141Q5JVX7 400 aa23.23■■□□□ 1.31
TUBA4A-201ENST00000248437 CEP85Q6P2H3 762 aa23.23■■□□□ 1.31
TUBA4A-201ENST00000248437 MEIS3Q99687 375 aa23.23■■□□□ 1.31
TUBA4A-201ENST00000248437 DAXXQ9UER7 740 aaPredicted RBP23.23■■□□□ 1.31
TUBA4A-201ENST00000248437 TEFQ10587 303 aa23.22■■□□□ 1.31
TUBA4A-201ENST00000248437 CHRNA2Q15822 529 aa23.22■■□□□ 1.31
TUBA4A-201ENST00000248437 TBC1D32Q96NH3 1257 aa23.22■■□□□ 1.31
TUBA4A-201ENST00000248437 EIF4A1P60842 406 aaKnown RBP23.21■■□□□ 1.31
TUBA4A-201ENST00000248437 BMP2KLQ5H9B9 411 aa23.21■■□□□ 1.31
TUBA4A-201ENST00000248437 PLEKHG2Q9H7P9 1386 aa23.21■■□□□ 1.31
TUBA4A-201ENST00000248437 F6X3S4 739 aa23.2■■□□□ 1.3
TUBA4A-201ENST00000248437 RNMTO43148 476 aaKnown RBP23.2■■□□□ 1.3
TUBA4A-201ENST00000248437 FKBP5Q13451 457 aaPredicted RBP23.2■■□□□ 1.3
TUBA4A-201ENST00000248437 HDGFL1Q5TGJ6 251 aa23.2■■□□□ 1.3
TUBA4A-201ENST00000248437 SLC4A10Q6U841 1118 aa23.2■■□□□ 1.3
TUBA4A-201ENST00000248437 BTBD11A6QL63 1104 aa23.17■■□□□ 1.3
TUBA4A-201ENST00000248437 MPRIPQ6WCQ1 1025 aa23.17■■□□□ 1.3
TUBA4A-201ENST00000248437 SCN11AQ9UI33 1791 aa23.17■■□□□ 1.3
TUBA4A-201ENST00000248437 ABCA3Q99758 1704 aa23.16■■□□□ 1.3
TUBA4A-201ENST00000248437 HMMRO75330 724 aa23.16■■□□□ 1.3
TUBA4A-201ENST00000248437 PIP4K2BP78356 416 aa23.16■■□□□ 1.3
TUBA4A-201ENST00000248437 AHDC1Q5TGY3 1603 aaPredicted RBP23.16■■□□□ 1.3
TUBA4A-201ENST00000248437 CPDO75976 1380 aa23.16■■□□□ 1.3
TUBA4A-201ENST00000248437 NECTIN2Q92692 538 aa23.16■■□□□ 1.3
TUBA4A-201ENST00000248437 GNAI3P08754 354 aa23.15■■□□□ 1.3
TUBA4A-201ENST00000248437 GNAI2P04899 355 aa23.14■■□□□ 1.3
TUBA4A-201ENST00000248437 RAPGEF4Q8WZA2 1011 aa23.13■■□□□ 1.29
TUBA4A-201ENST00000248437 BECN1Q14457 450 aa23.13■■□□□ 1.29
TUBA4A-201ENST00000248437 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.13■■□□□ 1.29
TUBA4A-201ENST00000248437 HEG1Q9ULI3 1381 aa23.12■■□□□ 1.29
TUBA4A-201ENST00000248437 SLC4A3P48751 1232 aa23.12■■□□□ 1.29
TUBA4A-201ENST00000248437 PKD1L3Q7Z443 1732 aa23.12■■□□□ 1.29
TUBA4A-201ENST00000248437 TOM1O60784 492 aa23.11■■□□□ 1.29
TUBA4A-201ENST00000248437 PRDM11Q9NQV5 511 aa23.11■■□□□ 1.29
TUBA4A-201ENST00000248437 KCNQ3O43525 872 aa23.11■■□□□ 1.29
TUBA4A-201ENST00000248437 NLRP2Q9NX02 1062 aa23.11■■□□□ 1.29
TUBA4A-201ENST00000248437 TATP17735 454 aaPredicted RBP23.1■■□□□ 1.29
TUBA4A-201ENST00000248437 PLEKHM2Q8IWE5 1019 aa23.1■■□□□ 1.29
TUBA4A-201ENST00000248437 C22orf23Q9BZE7 217 aa23.1■■□□□ 1.29
TUBA4A-201ENST00000248437 MFAP1P55081 439 aaKnown RBP23.1■■□□□ 1.29
TUBA4A-201ENST00000248437 UBAP1LF5GYI3 381 aa23.09■■□□□ 1.29
TUBA4A-201ENST00000248437 EIF2S2P20042 333 aaKnown RBP23.09■■□□□ 1.29
TUBA4A-201ENST00000248437 NBR1Q14596 966 aa23.09■■□□□ 1.29
TUBA4A-201ENST00000248437 PHAXQ9H814 394 aaKnown RBP23.09■■□□□ 1.29
TUBA4A-201ENST00000248437 MEGF6O75095 1541 aa23.09■■□□□ 1.29
TUBA4A-201ENST00000248437 SPG7Q9UQ90 795 aa23.08■■□□□ 1.29
TUBA4A-201ENST00000248437 CHPF2Q9P2E5 772 aa23.08■■□□□ 1.29
TUBA4A-201ENST00000248437 PHLPP1O60346 1717 aa23.07■■□□□ 1.28
TUBA4A-201ENST00000248437 COL16A1Q07092 1604 aaPredicted RBP23.07■■□□□ 1.28
TUBA4A-201ENST00000248437 GIGYF1O75420 1035 aaPredicted RBP23.06■■□□□ 1.28
TUBA4A-201ENST00000248437 CSB-PGBD3P0DP91 1061 aa23.06■■□□□ 1.28
TUBA4A-201ENST00000248437 DBF4Q9UBU7 674 aaPredicted RBP23.06■■□□□ 1.28
TUBA4A-201ENST00000248437 KDM6AO15550 1401 aaPredicted RBP23.06■■□□□ 1.28
TUBA4A-201ENST00000248437 EIF5BO60841 1220 aaKnown RBP23.05■■□□□ 1.28
TUBA4A-201ENST00000248437 ATP8B2P98198 1209 aa23.05■■□□□ 1.28
TUBA4A-201ENST00000248437 USP44Q9H0E7 712 aa23.05■■□□□ 1.28
TUBA4A-201ENST00000248437 MRC1P22897 1456 aa23.05■■□□□ 1.28
TUBA4A-201ENST00000248437 PHKG2P15735 406 aa23.04■■□□□ 1.28
TUBA4A-201ENST00000248437 TTC22Q5TAA0 569 aa23.04■■□□□ 1.28
TUBA4A-201ENST00000248437 SRCIN1Q9C0H9 1055 aa23.04■■□□□ 1.28
TUBA4A-201ENST00000248437 USP35Q9P2H5 1018 aa23.04■■□□□ 1.28
TUBA4A-201ENST00000248437 RBM25P49756 843 aaKnown RBP23.04■■□□□ 1.28
TUBA4A-201ENST00000248437 PARP4Q9UKK3 1724 aaKnown RBP23.04■■□□□ 1.28
TUBA4A-201ENST00000248437 GSPT1P15170 499 aaKnown RBP23.03■■□□□ 1.28
TUBA4A-201ENST00000248437 IFNL2Q8IZJ0 200 aa23.03■■□□□ 1.28
TUBA4A-201ENST00000248437 CDC45O75419 566 aa23.03■■□□□ 1.28
TUBA4A-201ENST00000248437 UBTFL1P0CB47 393 aaPredicted RBP23.03■■□□□ 1.28
TUBA4A-201ENST00000248437 RTL5Q5HYW3 569 aaPredicted RBP23.03■■□□□ 1.28
TUBA4A-201ENST00000248437 DNAAF4Q8WXU2 420 aa23.03■■□□□ 1.28
TUBA4A-201ENST00000248437 SLC52A2Q9HAB3 445 aa23.03■■□□□ 1.28
TUBA4A-201ENST00000248437 TBC1D9Q6ZT07 1266 aa23.02■■□□□ 1.28
TUBA4A-201ENST00000248437 C16orf71Q8IYS4 520 aaPredicted RBP23.01■■□□□ 1.27
TUBA4A-201ENST00000248437 COL5A2P05997 1499 aaPredicted RBP23.01■■□□□ 1.27
TUBA4A-201ENST00000248437 LRRFIP2Q9Y608 721 aaKnown RBP23.01■■□□□ 1.27
TUBA4A-201ENST00000248437 C5P01031 1676 aa23.01■■□□□ 1.27
TUBA4A-201ENST00000248437 COL22A1Q8NFW1 1626 aaPredicted RBP23.01■■□□□ 1.27
TUBA4A-201ENST00000248437 ADCY9O60503 1353 aa23■■□□□ 1.27
TUBA4A-201ENST00000248437 BEND3Q5T5X7 828 aa23■■□□□ 1.27
TUBA4A-201ENST00000248437 PI4KAP2A4QPH2 592 aa23■■□□□ 1.27
TUBA4A-201ENST00000248437 PI4KAP1Q8N8J0 262 aa23■■□□□ 1.27
TUBA4A-201ENST00000248437 CERKQ8TCT0 537 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms