RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 MARCH10Q8NA82 808 aaPredicted RBP21.78■■□□□ 1.08
CDKN1A-201ENST00000244741 CEMIPQ8WUJ3 1361 aa21.78■■□□□ 1.08
CDKN1A-201ENST00000244741 TNS2Q63HR2 1409 aa21.77■■□□□ 1.08
CDKN1A-201ENST00000244741 NFATC2IPQ8NCF5 419 aa21.77■■□□□ 1.08
CDKN1A-201ENST00000244741 DCAF5Q96JK2 942 aa21.77■■□□□ 1.08
CDKN1A-201ENST00000244741 CFAP44Q96MT7 982 aa21.77■■□□□ 1.08
CDKN1A-201ENST00000244741 CALD1Q05682 793 aaKnown RBP21.77■■□□□ 1.07
CDKN1A-201ENST00000244741 LRRC37A3O60309 1634 aa21.76■■□□□ 1.07
CDKN1A-201ENST00000244741 GNAI1P63096 354 aa21.76■■□□□ 1.07
CDKN1A-201ENST00000244741 SEPT12Q8IYM1 358 aa21.76■■□□□ 1.07
CDKN1A-201ENST00000244741 MYH16Q9H6N6 1097 aa21.76■■□□□ 1.07
CDKN1A-201ENST00000244741 IFT57Q9NWB7 429 aa21.76■■□□□ 1.07
CDKN1A-201ENST00000244741 VIRMAQ69YN4 1812 aaKnown RBP21.76■■□□□ 1.07
CDKN1A-201ENST00000244741 ZNF853P0CG23 659 aa21.75■■□□□ 1.07
CDKN1A-201ENST00000244741 IL16Q14005 1332 aa21.75■■□□□ 1.07
CDKN1A-201ENST00000244741 TSPYL4Q9UJ04 414 aa21.75■■□□□ 1.07
CDKN1A-201ENST00000244741 PLEKHG2Q9H7P9 1386 aa21.74■■□□□ 1.07
CDKN1A-201ENST00000244741 ELL2O00472 640 aaPredicted RBP21.74■■□□□ 1.07
CDKN1A-201ENST00000244741 HSP90AB1P08238 724 aaKnown RBP21.74■■□□□ 1.07
CDKN1A-201ENST00000244741 TAF7Q15545 349 aaPredicted RBP21.74■■□□□ 1.07
CDKN1A-201ENST00000244741 KRT24Q2M2I5 525 aa21.74■■□□□ 1.07
CDKN1A-201ENST00000244741 POTEAQ6S8J7 498 aa21.74■■□□□ 1.07
CDKN1A-201ENST00000244741 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.74■■□□□ 1.07
CDKN1A-201ENST00000244741 ANP32AP39687 249 aaKnown RBP21.74■■□□□ 1.07
CDKN1A-201ENST00000244741 NOP58Q9Y2X3 529 aaKnown RBP21.74■■□□□ 1.07
CDKN1A-201ENST00000244741 CHL1O00533 1208 aa21.73■■□□□ 1.07
CDKN1A-201ENST00000244741 KCNQ3O43525 872 aa21.73■■□□□ 1.07
CDKN1A-201ENST00000244741 MS4A1P11836 297 aa21.73■■□□□ 1.07
CDKN1A-201ENST00000244741 PDE4AP27815 886 aa21.73■■□□□ 1.07
CDKN1A-201ENST00000244741 CABP4P57796 275 aa21.73■■□□□ 1.07
CDKN1A-201ENST00000244741 EXOSC9Q06265 439 aaKnown RBP21.73■■□□□ 1.07
CDKN1A-201ENST00000244741 SYTL4Q96C24 671 aaPredicted RBP21.73■■□□□ 1.07
CDKN1A-201ENST00000244741 ACSBG1Q96GR2 724 aa21.73■■□□□ 1.07
CDKN1A-201ENST00000244741 BTBD11A6QL63 1104 aa21.72■■□□□ 1.07
CDKN1A-201ENST00000244741 NKX1-1Q15270 411 aaPredicted RBP21.72■■□□□ 1.07
CDKN1A-201ENST00000244741 SKAP1Q86WV1 359 aa21.72■■□□□ 1.07
CDKN1A-201ENST00000244741 SLC52A2Q9HAB3 445 aa21.72■■□□□ 1.07
CDKN1A-201ENST00000244741 SLC39A6Q13433 755 aa21.72■■□□□ 1.07
CDKN1A-201ENST00000244741 RBM6P78332 1123 aaKnown RBP21.71■■□□□ 1.07
CDKN1A-201ENST00000244741 IPO9Q96P70 1041 aaKnown RBP21.71■■□□□ 1.07
CDKN1A-201ENST00000244741 SCN11AQ9UI33 1791 aa21.71■■□□□ 1.07
CDKN1A-201ENST00000244741 ONECUT3O60422 494 aaPredicted RBP21.71■■□□□ 1.07
CDKN1A-201ENST00000244741 BACH2Q9BYV9 841 aa21.7■■□□□ 1.06
CDKN1A-201ENST00000244741 KDM2BQ8NHM5 1336 aa21.7■■□□□ 1.06
CDKN1A-201ENST00000244741 THSD7AQ9UPZ6 1657 aa21.7■■□□□ 1.06
CDKN1A-201ENST00000244741 BCAR3O75815 825 aa21.7■■□□□ 1.06
CDKN1A-201ENST00000244741 RXRBP28702 533 aa21.7■■□□□ 1.06
CDKN1A-201ENST00000244741 TSPYL6Q8N831 410 aa21.7■■□□□ 1.06
CDKN1A-201ENST00000244741 C8orf58Q8NAV2 365 aa21.69■■□□□ 1.06
CDKN1A-201ENST00000244741 PRIM1P49642 420 aaKnown RBP21.68■■□□□ 1.06
CDKN1A-201ENST00000244741 TOGARAM1Q9Y4F4 1720 aa21.68■■□□□ 1.06
CDKN1A-201ENST00000244741 ADAMTS7Q9UKP4 1686 aa21.67■■□□□ 1.06
CDKN1A-201ENST00000244741 ERVV-2B6SEH9 535 aa21.67■■□□□ 1.06
CDKN1A-201ENST00000244741 KCNQ2O43526 872 aa21.66■■□□□ 1.06
CDKN1A-201ENST00000244741 TMOD3Q9NYL9 352 aa21.66■■□□□ 1.06
CDKN1A-201ENST00000244741 PIGBQ92521 554 aa21.65■■□□□ 1.06
CDKN1A-201ENST00000244741 CENPQQ7L2Z9 268 aaPredicted RBP21.65■■□□□ 1.06
CDKN1A-201ENST00000244741 PTF1AQ7RTS3 328 aa21.64■■□□□ 1.06
CDKN1A-201ENST00000244741 BCL2L13Q9BXK5 485 aa21.64■■□□□ 1.06
CDKN1A-201ENST00000244741 ZNF790Q6PG37 636 aa21.63■■□□□ 1.05
CDKN1A-201ENST00000244741 SIPA1L3O60292 1781 aaPredicted RBP21.63■■□□□ 1.05
CDKN1A-201ENST00000244741 NPM2Q86SE8 214 aaKnown RBP21.63■■□□□ 1.05
CDKN1A-201ENST00000244741 ASAP1Q9ULH1 1129 aa21.63■■□□□ 1.05
CDKN1A-201ENST00000244741 DOT1LQ8TEK3 1739 aa21.62■■□□□ 1.05
CDKN1A-201ENST00000244741 BRWD3Q6RI45 1802 aa21.62■■□□□ 1.05
CDKN1A-201ENST00000244741 TWISTNBQ3B726 338 aaPredicted RBP21.62■■□□□ 1.05
CDKN1A-201ENST00000244741 KRT27Q7Z3Y8 459 aa21.62■■□□□ 1.05
CDKN1A-201ENST00000244741 NECTIN2Q92692 538 aa21.62■■□□□ 1.05
CDKN1A-201ENST00000244741 MRC1P22897 1456 aa21.62■■□□□ 1.05
CDKN1A-201ENST00000244741 PRAMEF22A3QJZ6 481 aa21.61■■□□□ 1.05
CDKN1A-201ENST00000244741 EIF4A1P60842 406 aaKnown RBP21.61■■□□□ 1.05
CDKN1A-201ENST00000244741 PTCD1O75127 700 aaKnown RBP21.61■■□□□ 1.05
CDKN1A-201ENST00000244741 ZBTB47Q9UFB7 747 aaPredicted RBP21.61■■□□□ 1.05
CDKN1A-201ENST00000244741 ITGB4P16144 1822 aa21.61■■□□□ 1.05
CDKN1A-201ENST00000244741 TTC5Q8N0Z6 440 aa21.6■■□□□ 1.05
CDKN1A-201ENST00000244741 VAMP4O75379 141 aa21.6■■□□□ 1.05
CDKN1A-201ENST00000244741 ZNF496Q96IT1 587 aaPredicted RBP21.6■■□□□ 1.05
CDKN1A-201ENST00000244741 BABAM1Q9NWV8 329 aa21.59■■□□□ 1.05
CDKN1A-201ENST00000244741 RGS12O14924 1447 aa21.59■■□□□ 1.05
CDKN1A-201ENST00000244741 KDM3BQ7LBC6 1761 aa21.58■■□□□ 1.05
CDKN1A-201ENST00000244741 BCL9O00512 1426 aa21.58■■□□□ 1.04
CDKN1A-201ENST00000244741 ATG3Q9NT62 314 aa21.57■■□□□ 1.04
CDKN1A-201ENST00000244741 EIF2S2P20042 333 aaKnown RBP21.57■■□□□ 1.04
CDKN1A-201ENST00000244741 RARSP54136 660 aaKnown RBP21.56■■□□□ 1.04
CDKN1A-201ENST00000244741 PDE3AQ14432 1141 aa21.55■■□□□ 1.04
CDKN1A-201ENST00000244741 SSH1Q8WYL5 1049 aa21.55■■□□□ 1.04
CDKN1A-201ENST00000244741 RBM42Q9BTD8 480 aaKnown RBP21.55■■□□□ 1.04
CDKN1A-201ENST00000244741 GIGYF1O75420 1035 aaPredicted RBP21.53■■□□□ 1.04
CDKN1A-201ENST00000244741 FMNL2Q96PY5 1086 aa21.53■■□□□ 1.04
CDKN1A-201ENST00000244741 SMC4Q9NTJ3 1288 aa21.53■■□□□ 1.04
CDKN1A-201ENST00000244741 PANK1Q8TE04 598 aa21.53■■□□□ 1.04
CDKN1A-201ENST00000244741 TRIM37O94972 964 aa21.52■■□□□ 1.04
CDKN1A-201ENST00000244741 FRAT1Q92837 279 aaPredicted RBP21.52■■□□□ 1.04
CDKN1A-201ENST00000244741 CANXP27824 592 aaKnown RBP21.51■■□□□ 1.03
CDKN1A-201ENST00000244741 HDGFL1Q5TGJ6 251 aa21.51■■□□□ 1.03
CDKN1A-201ENST00000244741 FAM196AQ6ZSG2 479 aa21.51■■□□□ 1.03
CDKN1A-201ENST00000244741 USP16Q9Y5T5 823 aa21.51■■□□□ 1.03
CDKN1A-201ENST00000244741 PIP4K2AP48426 406 aaPredicted RBP21.5■■□□□ 1.03
CDKN1A-201ENST00000244741 COG6Q9Y2V7 657 aa21.5■■□□□ 1.03
CDKN1A-201ENST00000244741 ANXA1P04083 346 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 139 ms