RNA–Protein interactions for RNA: ENST00000244709.8

TREM1-201, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TREM1, Length 1,690 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-201ENST00000244709 GNAI1P63096 354 aa14.96□□□□□ -0.01
TREM1-201ENST00000244709 MYH16Q9H6N6 1097 aa14.96□□□□□ -0.01
TREM1-201ENST00000244709 FANCIQ9NVI1 1328 aa14.96□□□□□ -0.02
TREM1-201ENST00000244709 TAF7Q15545 349 aaPredicted RBP14.95□□□□□ -0.02
TREM1-201ENST00000244709 SLC52A2Q9HAB3 445 aa14.95□□□□□ -0.02
TREM1-201ENST00000244709 MBIPQ9NS73 344 aa14.95□□□□□ -0.02
TREM1-201ENST00000244709 MIS18AQ9NYP9 233 aa14.95□□□□□ -0.02
TREM1-201ENST00000244709 RGS12O14924 1447 aa14.94□□□□□ -0.02
TREM1-201ENST00000244709 ERVV-2B6SEH9 535 aa14.94□□□□□ -0.02
TREM1-201ENST00000244709 CHL1O00533 1208 aa14.94□□□□□ -0.02
TREM1-201ENST00000244709 CENPBP07199 599 aaPredicted RBP14.94□□□□□ -0.02
TREM1-201ENST00000244709 CABP4P57796 275 aa14.93□□□□□ -0.02
TREM1-201ENST00000244709 NFATC2IPQ8NCF5 419 aa14.93□□□□□ -0.02
TREM1-201ENST00000244709 TSPYL4Q9UJ04 414 aa14.93□□□□□ -0.02
TREM1-201ENST00000244709 PAPPAQ13219 1627 aa14.93□□□□□ -0.02
TREM1-201ENST00000244709 SBF2Q86WG5 1849 aa14.93□□□□□ -0.02
TREM1-201ENST00000244709 BTBD11A6QL63 1104 aa14.93□□□□□ -0.02
TREM1-201ENST00000244709 FAM182BQ5T319 152 aa14.92□□□□□ -0.02
TREM1-201ENST00000244709 ACSBG1Q96GR2 724 aa14.92□□□□□ -0.02
TREM1-201ENST00000244709 BABAM1Q9NWV8 329 aa14.91□□□□□ -0.02
TREM1-201ENST00000244709 NHSQ6T4R5 1651 aa14.91□□□□□ -0.02
TREM1-201ENST00000244709 KRT27Q7Z3Y8 459 aa14.9□□□□□ -0.02
TREM1-201ENST00000244709 TMOD3Q9NYL9 352 aa14.9□□□□□ -0.02
TREM1-201ENST00000244709 UBR2Q8IWV8 1755 aa14.9□□□□□ -0.02
TREM1-201ENST00000244709 KCNQ3O43525 872 aa14.9□□□□□ -0.02
TREM1-201ENST00000244709 EXOSC9Q06265 439 aaKnown RBP14.9□□□□□ -0.02
TREM1-201ENST00000244709 SLC39A6Q13433 755 aa14.9□□□□□ -0.02
TREM1-201ENST00000244709 SYTL4Q96C24 671 aaPredicted RBP14.9□□□□□ -0.02
TREM1-201ENST00000244709 BCL9O00512 1426 aa14.9□□□□□ -0.02
TREM1-201ENST00000244709 PRIM1P49642 420 aaKnown RBP14.89□□□□□ -0.03
TREM1-201ENST00000244709 PIGBQ92521 554 aa14.89□□□□□ -0.03
TREM1-201ENST00000244709 BTAF1O14981 1849 aa14.87□□□□□ -0.03
TREM1-201ENST00000244709 KRT24Q2M2I5 525 aa14.87□□□□□ -0.03
TREM1-201ENST00000244709 ZNF790Q6PG37 636 aa14.87□□□□□ -0.03
TREM1-201ENST00000244709 KCPQ6ZWJ8 1503 aa14.87□□□□□ -0.03
TREM1-201ENST00000244709 KCNQ2O43526 872 aa14.87□□□□□ -0.03
TREM1-201ENST00000244709 C8orf58Q8NAV2 365 aa14.87□□□□□ -0.03
TREM1-201ENST00000244709 C5P01031 1676 aa14.86□□□□□ -0.03
TREM1-201ENST00000244709 EIF4A1P60842 406 aaKnown RBP14.86□□□□□ -0.03
TREM1-201ENST00000244709 TTC5Q8N0Z6 440 aa14.86□□□□□ -0.03
TREM1-201ENST00000244709 TSPYL6Q8N831 410 aa14.86□□□□□ -0.03
TREM1-201ENST00000244709 ELL2O00472 640 aaPredicted RBP14.85□□□□□ -0.03
TREM1-201ENST00000244709 TWISTNBQ3B726 338 aaPredicted RBP14.84□□□□□ -0.03
TREM1-201ENST00000244709 FAM196AQ6ZSG2 479 aa14.84□□□□□ -0.03
TREM1-201ENST00000244709 PTF1AQ7RTS3 328 aa14.84□□□□□ -0.03
TREM1-201ENST00000244709 ATG3Q9NT62 314 aa14.84□□□□□ -0.03
TREM1-201ENST00000244709 ASAP1Q9ULH1 1129 aa14.84□□□□□ -0.03
TREM1-201ENST00000244709 ZNF496Q96IT1 587 aaPredicted RBP14.84□□□□□ -0.03
TREM1-201ENST00000244709 HEG1Q9ULI3 1381 aa14.83□□□□□ -0.04
TREM1-201ENST00000244709 LAMB4A4D0S4 1761 aa14.83□□□□□ -0.04
TREM1-201ENST00000244709 VAMP4O75379 141 aa14.83□□□□□ -0.04
TREM1-201ENST00000244709 CT47B1P0C2W7 299 aaPredicted RBP14.82□□□□□ -0.04
TREM1-201ENST00000244709 FMNL2Q96PY5 1086 aa14.82□□□□□ -0.04
TREM1-201ENST00000244709 RCAN3Q9UKA8 241 aa14.82□□□□□ -0.04
TREM1-201ENST00000244709 EP400Q96L91 3159 aa14.81□□□□□ -0.04
TREM1-201ENST00000244709 PRAMEF22A3QJZ6 481 aa14.81□□□□□ -0.04
TREM1-201ENST00000244709 PTCD1O75127 700 aaKnown RBP14.81□□□□□ -0.04
TREM1-201ENST00000244709 TJP1Q07157 1748 aa14.8□□□□□ -0.04
TREM1-201ENST00000244709 GIGYF1O75420 1035 aaPredicted RBP14.8□□□□□ -0.04
TREM1-201ENST00000244709 BCL11BQ9C0K0 894 aaPredicted RBP14.8□□□□□ -0.04
TREM1-201ENST00000244709 PALLDQ8WX93 1383 aa14.79□□□□□ -0.04
TREM1-201ENST00000244709 LY75O60449 1722 aa14.79□□□□□ -0.04
TREM1-201ENST00000244709 TNS1Q9HBL0 1735 aaKnown RBP14.79□□□□□ -0.04
TREM1-201ENST00000244709 HOXB7P09629 217 aa14.79□□□□□ -0.04
TREM1-201ENST00000244709 RARSP54136 660 aaKnown RBP14.79□□□□□ -0.04
TREM1-201ENST00000244709 RBM42Q9BTD8 480 aaKnown RBP14.79□□□□□ -0.04
TREM1-201ENST00000244709 SOS1Q07889 1333 aaPredicted RBP14.79□□□□□ -0.04
TREM1-201ENST00000244709 TCERG1O14776 1098 aaKnown RBP14.78□□□□□ -0.04
TREM1-201ENST00000244709 TRIM37O94972 964 aa14.78□□□□□ -0.04
TREM1-201ENST00000244709 SNRPA1P09661 255 aaKnown RBP14.78□□□□□ -0.04
TREM1-201ENST00000244709 SSH1Q8WYL5 1049 aa14.78□□□□□ -0.04
TREM1-201ENST00000244709 BCL2L13Q9BXK5 485 aa14.78□□□□□ -0.04
TREM1-201ENST00000244709 CACNA1FO60840 1977 aa14.78□□□□□ -0.04
TREM1-201ENST00000244709 CICQ96RK0 1608 aaPredicted RBP14.78□□□□□ -0.04
TREM1-201ENST00000244709 BCAR3O75815 825 aa14.77□□□□□ -0.04
TREM1-201ENST00000244709 EIF2S2P20042 333 aaKnown RBP14.77□□□□□ -0.04
TREM1-201ENST00000244709 NECTIN2Q92692 538 aa14.77□□□□□ -0.04
TREM1-201ENST00000244709 SMARCC1Q92922 1105 aaPredicted RBP14.77□□□□□ -0.04
TREM1-201ENST00000244709 ZNF428Q96B54 188 aa14.77□□□□□ -0.04
TREM1-201ENST00000244709 SLC4A9Q96Q91 983 aa14.77□□□□□ -0.04
TREM1-201ENST00000244709 ZNF831Q5JPB2 1677 aa14.77□□□□□ -0.05
TREM1-201ENST00000244709 HDGFL1Q5TGJ6 251 aa14.77□□□□□ -0.05
TREM1-201ENST00000244709 ALDH1L2Q3SY69 923 aa14.76□□□□□ -0.05
TREM1-201ENST00000244709 SMC4Q9NTJ3 1288 aa14.76□□□□□ -0.05
TREM1-201ENST00000244709 SUPT16HQ9Y5B9 1047 aaKnown RBP14.76□□□□□ -0.05
TREM1-201ENST00000244709 USP16Q9Y5T5 823 aa14.76□□□□□ -0.05
TREM1-201ENST00000244709 COL5A3P25940 1745 aaPredicted RBP14.75□□□□□ -0.05
TREM1-201ENST00000244709 VSIG10Q8N0Z9 540 aa14.75□□□□□ -0.05
TREM1-201ENST00000244709 LOC102724428A0A0B4J2F2 783 aa14.74□□□□□ -0.05
TREM1-201ENST00000244709 SIK1P57059 783 aa14.74□□□□□ -0.05
TREM1-201ENST00000244709 CCDC30Q5VVM6 783 aa14.74□□□□□ -0.05
TREM1-201ENST00000244709 DNAJC10Q8IXB1 793 aa14.74□□□□□ -0.05
TREM1-201ENST00000244709 MRPL50Q8N5N7 158 aaKnown RBP14.74□□□□□ -0.05
TREM1-201ENST00000244709 ATP6V1AP38606 617 aa14.74□□□□□ -0.05
TREM1-201ENST00000244709 TAF1LQ8IZX4 1826 aa14.74□□□□□ -0.05
TREM1-201ENST00000244709 CHPF2Q9P2E5 772 aa14.73□□□□□ -0.05
TREM1-201ENST00000244709 RRP1P56182 461 aaKnown RBP14.72□□□□□ -0.05
TREM1-201ENST00000244709 ITPK1Q13572 414 aa14.72□□□□□ -0.05
TREM1-201ENST00000244709 STK31Q9BXU1 1019 aa14.72□□□□□ -0.05
TREM1-201ENST00000244709 TEX13AQ9BXU3 409 aaPredicted RBP14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms