RNA–Protein interactions for RNA: ENST00000244520.9

SNRPC-201, Transcript of small nuclear ribonucleoprotein polypeptide C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPC, Length 842 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPC-201ENST00000244520 MTFR1LQ9H019 292 aa18.36■□□□□ 0.53
SNRPC-201ENST00000244520 ERVV-2B6SEH9 535 aa18.35■□□□□ 0.53
SNRPC-201ENST00000244520 PTCD1O75127 700 aaKnown RBP18.35■□□□□ 0.53
SNRPC-201ENST00000244520 AKAP4Q5JQC9 854 aa18.35■□□□□ 0.53
SNRPC-201ENST00000244520 COL23A1Q86Y22 540 aaPredicted RBP18.35■□□□□ 0.53
SNRPC-201ENST00000244520 U2AF1L5P0DN76 240 aaPredicted RBP18.34■□□□□ 0.53
SNRPC-201ENST00000244520 U2AF1Q01081 240 aaKnown RBP eCLIP18.34■□□□□ 0.533e-7■■□□□ 13.1
SNRPC-201ENST00000244520 AK7Q96M32 723 aa18.34■□□□□ 0.53
SNRPC-201ENST00000244520 SLC4A9Q96Q91 983 aa18.34■□□□□ 0.53
SNRPC-201ENST00000244520 TAF1LQ8IZX4 1826 aa18.34■□□□□ 0.53
SNRPC-201ENST00000244520 C4BP0C0L5 1744 aa18.33■□□□□ 0.52
SNRPC-201ENST00000244520 PRKAR2BP31323 418 aa18.33■□□□□ 0.52
SNRPC-201ENST00000244520 PHACTR3Q96KR7 559 aa18.33■□□□□ 0.52
SNRPC-201ENST00000244520 RNMTO43148 476 aaKnown RBP18.32■□□□□ 0.52
SNRPC-201ENST00000244520 SLC39A6Q13433 755 aa18.32■□□□□ 0.52
SNRPC-201ENST00000244520 SGIP1Q9BQI5 828 aa18.31■□□□□ 0.52
SNRPC-201ENST00000244520 FHDC1Q9C0D6 1143 aaPredicted RBP18.31■□□□□ 0.52
SNRPC-201ENST00000244520 PLEKHG2Q9H7P9 1386 aa18.3■□□□□ 0.52
SNRPC-201ENST00000244520 GNPATO15228 680 aa18.3■□□□□ 0.52
SNRPC-201ENST00000244520 RSPH6AQ9H0K4 717 aa18.3■□□□□ 0.52
SNRPC-201ENST00000244520 NUDCQ9Y266 331 aa18.3■□□□□ 0.52
SNRPC-201ENST00000244520 SCN11AQ9UI33 1791 aa18.3■□□□□ 0.52
SNRPC-201ENST00000244520 ARXQ96QS3 562 aa18.29■□□□□ 0.52
SNRPC-201ENST00000244520 QSER1Q2KHR3 1735 aa18.29■□□□□ 0.52
SNRPC-201ENST00000244520 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.28■□□□□ 0.52
SNRPC-201ENST00000244520 SLC52A2Q9HAB3 445 aa18.28■□□□□ 0.52
SNRPC-201ENST00000244520 VIRMAQ69YN4 1812 aaKnown RBP18.28■□□□□ 0.52
SNRPC-201ENST00000244520 POLD1P28340 1107 aa18.26■□□□□ 0.51
SNRPC-201ENST00000244520 MAP3K5Q99683 1374 aa18.26■□□□□ 0.51
SNRPC-201ENST00000244520 GNAT3A8MTJ3 354 aa18.25■□□□□ 0.51
SNRPC-201ENST00000244520 IL17REQ8NFR9 667 aa18.25■□□□□ 0.51
SNRPC-201ENST00000244520 GAS2L2Q8NHY3 880 aa18.25■□□□□ 0.51
SNRPC-201ENST00000244520 UBR3Q6ZT12 1888 aa18.24■□□□□ 0.51
SNRPC-201ENST00000244520 DCTN1Q14203 1278 aa18.24■□□□□ 0.51
SNRPC-201ENST00000244520 SLC16A10Q8TF71 515 aa18.24■□□□□ 0.51
SNRPC-201ENST00000244520 SYT17Q9BSW7 474 aa18.24■□□□□ 0.51
SNRPC-201ENST00000244520 MCM10Q7L590 875 aa18.23■□□□□ 0.51
SNRPC-201ENST00000244520 DNAJC10Q8IXB1 793 aa18.23■□□□□ 0.51
SNRPC-201ENST00000244520 TEFQ10587 303 aa18.22■□□□□ 0.51
SNRPC-201ENST00000244520 ZEB1P37275 1124 aaPredicted RBP18.21■□□□□ 0.51
SNRPC-201ENST00000244520 CRKLP46109 303 aaKnown RBP18.21■□□□□ 0.51
SNRPC-201ENST00000244520 NLGN2Q8NFZ4 835 aa18.21■□□□□ 0.51
SNRPC-201ENST00000244520 TJP1Q07157 1748 aa18.2■□□□□ 0.5
SNRPC-201ENST00000244520 MRC1P22897 1456 aa18.2■□□□□ 0.5
SNRPC-201ENST00000244520 KCNQ3O43525 872 aa18.2■□□□□ 0.5
SNRPC-201ENST00000244520 FCHSD2O94868 740 aa18.2■□□□□ 0.5
SNRPC-201ENST00000244520 SSFA2P28290 1259 aa18.2■□□□□ 0.5
SNRPC-201ENST00000244520 PELP1Q8IZL8 1130 aaKnown RBP18.2■□□□□ 0.5
SNRPC-201ENST00000244520 FLAD1Q8NFF5 587 aa18.2■□□□□ 0.5
SNRPC-201ENST00000244520 RTCBQ9Y3I0 505 aaKnown RBP18.2■□□□□ 0.5
SNRPC-201ENST00000244520 COL5A3P25940 1745 aaPredicted RBP18.2■□□□□ 0.5
SNRPC-201ENST00000244520 RALBP1Q15311 655 aa18.19■□□□□ 0.5
SNRPC-201ENST00000244520 TRAPPC3LQ5T215 181 aa18.19■□□□□ 0.5
SNRPC-201ENST00000244520 ARHGEF1Q92888 912 aaKnown RBP18.19■□□□□ 0.5
SNRPC-201ENST00000244520 WWC3Q9ULE0 1092 aa18.19■□□□□ 0.5
SNRPC-201ENST00000244520 ADAMTS7Q9UKP4 1686 aa18.18■□□□□ 0.5
SNRPC-201ENST00000244520 KCPQ6ZWJ8 1503 aa18.18■□□□□ 0.5
SNRPC-201ENST00000244520 TTC5Q8N0Z6 440 aa18.18■□□□□ 0.5
SNRPC-201ENST00000244520 SRP68Q9UHB9 627 aaKnown RBP18.18■□□□□ 0.5
SNRPC-201ENST00000244520 MYH14Q7Z406 1995 aaKnown RBP18.18■□□□□ 0.5
SNRPC-201ENST00000244520 RTF1Q92541 710 aaKnown RBP18.17■□□□□ 0.5
SNRPC-201ENST00000244520 CNTNAP4Q9C0A0 1308 aa18.17■□□□□ 0.5
SNRPC-201ENST00000244520 COL24A1Q17RW2 1714 aa18.16■□□□□ 0.5
SNRPC-201ENST00000244520 RPS6KA4O75676 772 aa18.16■□□□□ 0.5
SNRPC-201ENST00000244520 INTS5Q6P9B9 1019 aaKnown RBP18.16■□□□□ 0.5
SNRPC-201ENST00000244520 THUMPD2Q9BTF0 503 aaKnown RBP18.16■□□□□ 0.5
SNRPC-201ENST00000244520 MIS18AQ9NYP9 233 aa18.16■□□□□ 0.5
SNRPC-201ENST00000244520 MYBBP1AQ9BQG0 1328 aaKnown RBP18.16■□□□□ 0.5
SNRPC-201ENST00000244520 BTBD11A6QL63 1104 aa18.15■□□□□ 0.5
SNRPC-201ENST00000244520 RFC4P35249 363 aa18.15■□□□□ 0.5
SNRPC-201ENST00000244520 RC3H1Q5TC82 1133 aaKnown RBP18.15■□□□□ 0.5
SNRPC-201ENST00000244520 CCDC146Q8IYE0 955 aa18.15■□□□□ 0.5
SNRPC-201ENST00000244520 ZNF496Q96IT1 587 aaPredicted RBP18.15■□□□□ 0.5
SNRPC-201ENST00000244520 DCAF8L1A6NGE4 600 aa18.14■□□□□ 0.49
SNRPC-201ENST00000244520 CYP19A1P11511 503 aaPredicted RBP18.14■□□□□ 0.49
SNRPC-201ENST00000244520 HMGB2P26583 209 aaKnown RBP18.14■□□□□ 0.49
SNRPC-201ENST00000244520 CANXP27824 592 aaKnown RBP18.14■□□□□ 0.49
SNRPC-201ENST00000244520 ZNF790Q6PG37 636 aa18.14■□□□□ 0.49
SNRPC-201ENST00000244520 PLEKHF1Q96S99 279 aa18.14■□□□□ 0.49
SNRPC-201ENST00000244520 CCDC87Q9NVE4 849 aa18.14■□□□□ 0.49
SNRPC-201ENST00000244520 ZBTB1Q9Y2K1 713 aa18.14■□□□□ 0.49
SNRPC-201ENST00000244520 ZNF831Q5JPB2 1677 aa18.14■□□□□ 0.49
SNRPC-201ENST00000244520 UTRNP46939 3433 aa18.13■□□□□ 0.49
SNRPC-201ENST00000244520 SIPA1L3O60292 1781 aaPredicted RBP18.13■□□□□ 0.49
SNRPC-201ENST00000244520 PRAMEF22A3QJZ6 481 aa18.13■□□□□ 0.49
SNRPC-201ENST00000244520 NEFMP07197 916 aa18.13■□□□□ 0.49
SNRPC-201ENST00000244520 MMP10P09238 476 aa18.13■□□□□ 0.49
SNRPC-201ENST00000244520 ZNF330Q9Y3S2 320 aaPredicted RBP18.13■□□□□ 0.49
SNRPC-201ENST00000244520 CEMIPQ8WUJ3 1361 aa18.13■□□□□ 0.49
SNRPC-201ENST00000244520 PIP4K2AP48426 406 aaPredicted RBP18.12■□□□□ 0.49
SNRPC-201ENST00000244520 GPR162Q16538 588 aa18.12■□□□□ 0.49
SNRPC-201ENST00000244520 PRKRIP1Q9H875 184 aaPredicted RBP18.12■□□□□ 0.49
SNRPC-201ENST00000244520 RRP7AQ9Y3A4 280 aaKnown RBP18.12■□□□□ 0.49
SNRPC-201ENST00000244520 MAPK8IP3Q9UPT6 1336 aa18.12■□□□□ 0.49
SNRPC-201ENST00000244520 C4AP0C0L4 1744 aa18.12■□□□□ 0.49
SNRPC-201ENST00000244520 GYS1P13807 737 aa18.11■□□□□ 0.49
SNRPC-201ENST00000244520 UBR2Q8IWV8 1755 aa18.11■□□□□ 0.49
SNRPC-201ENST00000244520 GOLGB1Q14789 3259 aaKnown RBP18.1■□□□□ 0.49
SNRPC-201ENST00000244520 DLG5Q8TDM6 1919 aa18.1■□□□□ 0.49
SNRPC-201ENST00000244520 FKBP8Q14318 412 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms