RNA–Protein interactions for RNA: ENST00000244050.2

SNAI1-201, Transcript of snail family transcriptional repressor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAI1, Length 1,686 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI1-201ENST00000244050 GAS2L2Q8NHY3 880 aa16.05■□□□□ 0.16
SNAI1-201ENST00000244050 CHMP4BQ9H444 224 aaKnown RBP16.05■□□□□ 0.16
SNAI1-201ENST00000244050 SMC5Q8IY18 1101 aa16.05■□□□□ 0.16
SNAI1-201ENST00000244050 USHBP1Q8N6Y0 703 aa16.05■□□□□ 0.16
SNAI1-201ENST00000244050 BTG4Q9NY30 223 aa16.04■□□□□ 0.16
SNAI1-201ENST00000244050 USP35Q9P2H5 1018 aa16.04■□□□□ 0.16
SNAI1-201ENST00000244050 ZC3H6P61129 1189 aaKnown RBP16.03■□□□□ 0.16
SNAI1-201ENST00000244050 NBPF6Q5VWK0 638 aa16.03■□□□□ 0.16
SNAI1-201ENST00000244050 MCM10Q7L590 875 aa16.03■□□□□ 0.16
SNAI1-201ENST00000244050 TSPYL6Q8N831 410 aa16.03■□□□□ 0.16
SNAI1-201ENST00000244050 RTF1Q92541 710 aaKnown RBP16.03■□□□□ 0.16
SNAI1-201ENST00000244050 NBPF4Q96M43 638 aa16.03■□□□□ 0.16
SNAI1-201ENST00000244050 FAM98CQ17RN3 349 aaKnown RBP16.02■□□□□ 0.16
SNAI1-201ENST00000244050 TWISTNBQ3B726 338 aaPredicted RBP16.02■□□□□ 0.16
SNAI1-201ENST00000244050 RTL5Q5HYW3 569 aaPredicted RBP16.02■□□□□ 0.16
SNAI1-201ENST00000244050 DAXXQ9UER7 740 aaPredicted RBP16.02■□□□□ 0.16
SNAI1-201ENST00000244050 COL14A1Q05707 1796 aaKnown RBP16.02■□□□□ 0.16
SNAI1-201ENST00000244050 ANKRD24Q8TF21 1146 aa16.02■□□□□ 0.15
SNAI1-201ENST00000244050 CAMTA1Q9Y6Y1 1673 aa16.02■□□□□ 0.15
SNAI1-201ENST00000244050 ZBTB7BO15156 539 aaPredicted RBP16■□□□□ 0.15
SNAI1-201ENST00000244050 SEC24BO95487 1268 aa16■□□□□ 0.15
SNAI1-201ENST00000244050 SF3B2Q13435 895 aaKnown RBP16■□□□□ 0.15
SNAI1-201ENST00000244050 C8orf58Q8NAV2 365 aa16■□□□□ 0.15
SNAI1-201ENST00000244050 AXIN2Q9Y2T1 843 aa16■□□□□ 0.15
SNAI1-201ENST00000244050 ABCC4O15439 1325 aa16■□□□□ 0.15
SNAI1-201ENST00000244050 SPATA31A5Q5VU36 1347 aa16■□□□□ 0.15
SNAI1-201ENST00000244050 SPATA31A7Q8IWB4 1347 aa16■□□□□ 0.15
SNAI1-201ENST00000244050 GNAT3A8MTJ3 354 aa15.99■□□□□ 0.15
SNAI1-201ENST00000244050 LRRC37A3O60309 1634 aa15.99■□□□□ 0.15
SNAI1-201ENST00000244050 COL18A1P39060 1754 aa15.99■□□□□ 0.15
SNAI1-201ENST00000244050 CHL1O00533 1208 aa15.99■□□□□ 0.15
SNAI1-201ENST00000244050 HTATSF1O43719 755 aaKnown RBP15.99■□□□□ 0.15
SNAI1-201ENST00000244050 API5Q9BZZ5 524 aaKnown RBP15.99■□□□□ 0.15
SNAI1-201ENST00000244050 CRB1P82279 1406 aa15.98■□□□□ 0.15
SNAI1-201ENST00000244050 ABCC6O95255 1503 aa15.98■□□□□ 0.15
SNAI1-201ENST00000244050 MAP3K5Q99683 1374 aa15.98■□□□□ 0.15
SNAI1-201ENST00000244050 NCAPD2Q15021 1401 aa15.98■□□□□ 0.15
SNAI1-201ENST00000244050 A0A0G2JS52 829 aa15.98■□□□□ 0.15
SNAI1-201ENST00000244050 FAM182BQ5T319 152 aa15.98■□□□□ 0.15
SNAI1-201ENST00000244050 ERBB3P21860 1342 aa15.98■□□□□ 0.15
SNAI1-201ENST00000244050 FAM208AQ9UK61 1670 aaKnown RBP15.97■□□□□ 0.15
SNAI1-201ENST00000244050 THSD7AQ9UPZ6 1657 aa15.97■□□□□ 0.15
SNAI1-201ENST00000244050 KIAA0232Q92628 1395 aa15.97■□□□□ 0.15
SNAI1-201ENST00000244050 NUCB1Q02818 461 aa15.97■□□□□ 0.15
SNAI1-201ENST00000244050 UPF2Q9HAU5 1272 aaKnown RBP15.97■□□□□ 0.15
SNAI1-201ENST00000244050 LMO7Q8WWI1 1683 aa15.96■□□□□ 0.15
SNAI1-201ENST00000244050 ELL2O00472 640 aaPredicted RBP15.96■□□□□ 0.15
SNAI1-201ENST00000244050 SLC4A3P48751 1232 aa15.96■□□□□ 0.15
SNAI1-201ENST00000244050 DEKP35659 375 aaKnown RBP15.95■□□□□ 0.14
SNAI1-201ENST00000244050 TBC1D32Q96NH3 1257 aa15.95■□□□□ 0.14
SNAI1-201ENST00000244050 BAG6P46379 1132 aa15.95■□□□□ 0.14
SNAI1-201ENST00000244050 GCC1Q96CN9 775 aa15.95■□□□□ 0.14
SNAI1-201ENST00000244050 PRDM11Q9NQV5 511 aa15.95■□□□□ 0.14
SNAI1-201ENST00000244050 LRP5O75197 1615 aa15.95■□□□□ 0.14
SNAI1-201ENST00000244050 CPDO75976 1380 aa15.94■□□□□ 0.14
SNAI1-201ENST00000244050 PSDA5PKW4 1024 aaPredicted RBP15.94■□□□□ 0.14
SNAI1-201ENST00000244050 EN1Q05925 392 aaPredicted RBP15.94■□□□□ 0.14
SNAI1-201ENST00000244050 CHRNA2Q15822 529 aa15.94■□□□□ 0.14
SNAI1-201ENST00000244050 PLEKHO1Q53GL0 409 aaPredicted RBP15.93■□□□□ 0.14
SNAI1-201ENST00000244050 TSPYL4Q9UJ04 414 aa15.93■□□□□ 0.14
SNAI1-201ENST00000244050 SPATA31A1Q5TZJ5 1347 aa15.93■□□□□ 0.14
SNAI1-201ENST00000244050 CSB-PGBD3P0DP91 1061 aa15.92■□□□□ 0.14
SNAI1-201ENST00000244050 BECN1Q14457 450 aa15.92■□□□□ 0.14
SNAI1-201ENST00000244050 AMOTQ4VCS5 1084 aa15.92■□□□□ 0.14
SNAI1-201ENST00000244050 DISP2A7MBM2 1401 aa15.92■□□□□ 0.14
SNAI1-201ENST00000244050 INTS3Q68E01 1043 aaKnown RBP15.92■□□□□ 0.14
SNAI1-201ENST00000244050 ZNF530Q6P9A1 599 aaPredicted RBP15.92■□□□□ 0.14
SNAI1-201ENST00000244050 CHD1LQ86WJ1 897 aa15.92■□□□□ 0.14
SNAI1-201ENST00000244050 NLRP2Q9NX02 1062 aa15.92■□□□□ 0.14
SNAI1-201ENST00000244050 MIS18AQ9NYP9 233 aa15.92■□□□□ 0.14
SNAI1-201ENST00000244050 TNS1Q9HBL0 1735 aaKnown RBP15.91■□□□□ 0.14
SNAI1-201ENST00000244050 IL17REQ8NFR9 667 aa15.91■□□□□ 0.14
SNAI1-201ENST00000244050 AKAP4Q5JQC9 854 aa15.9■□□□□ 0.14
SNAI1-201ENST00000244050 KRT24Q2M2I5 525 aa15.89■□□□□ 0.13
SNAI1-201ENST00000244050 C1orf141Q5JVX7 400 aa15.89■□□□□ 0.13
SNAI1-201ENST00000244050 STRN4Q9NRL3 753 aa15.89■□□□□ 0.13
SNAI1-201ENST00000244050 PTPRCP08575 1304 aa15.89■□□□□ 0.13
SNAI1-201ENST00000244050 SIRT2Q8IXJ6 389 aa15.89■□□□□ 0.13
SNAI1-201ENST00000244050 RAPGEF4Q8WZA2 1011 aa15.89■□□□□ 0.13
SNAI1-201ENST00000244050 CEMIPQ8WUJ3 1361 aa15.88■□□□□ 0.13
SNAI1-201ENST00000244050 TAF7Q15545 349 aaPredicted RBP15.88■□□□□ 0.13
SNAI1-201ENST00000244050 NFKBIBQ15653 356 aa15.88■□□□□ 0.13
SNAI1-201ENST00000244050 EZH2Q15910 746 aaKnown RBP15.87■□□□□ 0.13
SNAI1-201ENST00000244050 LNPKQ9C0E8 428 aa15.87■□□□□ 0.13
SNAI1-201ENST00000244050 BABAM1Q9NWV8 329 aa15.87■□□□□ 0.13
SNAI1-201ENST00000244050 TATP17735 454 aaPredicted RBP15.86■□□□□ 0.13
SNAI1-201ENST00000244050 R3HDM1Q15032 1099 aaKnown RBP15.86■□□□□ 0.13
SNAI1-201ENST00000244050 BMP2KLQ5H9B9 411 aa15.86■□□□□ 0.13
SNAI1-201ENST00000244050 CAMKK2Q96RR4 588 aa15.86■□□□□ 0.13
SNAI1-201ENST00000244050 C1orf115Q9H7X2 142 aa15.86■□□□□ 0.13
SNAI1-201ENST00000244050 KDM3BQ7LBC6 1761 aa15.86■□□□□ 0.13
SNAI1-201ENST00000244050 TRIM37O94972 964 aa15.86■□□□□ 0.13
SNAI1-201ENST00000244050 ANKRD45Q5TZF3 282 aa15.86■□□□□ 0.13
SNAI1-201ENST00000244050 BARGINQ6ZT62 677 aa15.86■□□□□ 0.13
SNAI1-201ENST00000244050 LGR6Q9HBX8 967 aa15.86■□□□□ 0.13
SNAI1-201ENST00000244050 TEFQ10587 303 aa15.85■□□□□ 0.13
SNAI1-201ENST00000244050 LARP1Q6PKG0 1096 aaKnown RBP15.85■□□□□ 0.13
SNAI1-201ENST00000244050 MPRIPQ6WCQ1 1025 aa15.85■□□□□ 0.13
SNAI1-201ENST00000244050 FAM196AQ6ZSG2 479 aa15.85■□□□□ 0.13
SNAI1-201ENST00000244050 C22orf23Q9BZE7 217 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms