RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 C8orf34Q49A92 452 aa8.81□□□□□ -1
RIF1-201ENST00000243326 CCDC186Q7Z3E2 898 aa8.81□□□□□ -1
RIF1-201ENST00000243326 NOLC1Q14978 699 aaKnown RBP eCLIP8.81□□□□□ -1
RIF1-201ENST00000243326 RSPH14Q9UHP6 348 aa8.81□□□□□ -1
RIF1-201ENST00000243326 GOLGA6L10A6NI86 522 aa8.8□□□□□ -1
RIF1-201ENST00000243326 USP48Q86UV5 1035 aa8.8□□□□□ -1
RIF1-201ENST00000243326 EPB41L2O43491 1005 aaKnown RBP8.8□□□□□ -1
RIF1-201ENST00000243326 ZNHIT6Q9NWK9 470 aaKnown RBP8.8□□□□□ -1
RIF1-201ENST00000243326 TMPOP42166 694 aaKnown RBP8.8□□□□□ -1
RIF1-201ENST00000243326 TRMT1LQ7Z2T5 733 aaKnown RBP8.8□□□□□ -1
RIF1-201ENST00000243326 RRBP1Q9P2E9 1410 aaKnown RBP8.8□□□□□ -1
RIF1-201ENST00000243326 IGF1RP08069 1367 aa8.8□□□□□ -1
RIF1-201ENST00000243326 PDCP20941 246 aa8.8□□□□□ -1
RIF1-201ENST00000243326 DRC1Q96MC2 740 aa8.8□□□□□ -1
RIF1-201ENST00000243326 EIF5P55010 431 aaKnown RBP8.8□□□□□ -1
RIF1-201ENST00000243326 SRCIN1Q9C0H9 1055 aa8.8□□□□□ -1
RIF1-201ENST00000243326 CUX1P39880 1505 aa8.8□□□□□ -1
RIF1-201ENST00000243326 CDK13Q14004 1512 aaKnown RBP8.8□□□□□ -1
RIF1-201ENST00000243326 GOLGA6L10A0A0M3HER8 536 aa8.8□□□□□ -1
RIF1-201ENST00000243326 EIF3JO75822 258 aaKnown RBP8.8□□□□□ -1
RIF1-201ENST00000243326 TMEM132AQ24JP5 1023 aa8.8□□□□□ -1
RIF1-201ENST00000243326 ANKRD50Q9ULJ7 1429 aa8.8□□□□□ -1
RIF1-201ENST00000243326 C10orf67Q8IYJ2 551 aa8.8□□□□□ -1
RIF1-201ENST00000243326 SNRKQ9NRH2 765 aa8.8□□□□□ -1
RIF1-201ENST00000243326 PHACTR2O75167 634 aa8.8□□□□□ -1
RIF1-201ENST00000243326 TOP1P11387 765 aaKnown RBP8.8□□□□□ -1
RIF1-201ENST00000243326 LRRFIP1Q32MZ4 808 aaKnown RBP8.8□□□□□ -1
RIF1-201ENST00000243326 HSP90AB4PQ58FF6 505 aa8.8□□□□□ -1
RIF1-201ENST00000243326 FAM83GA6ND36 823 aa8.8□□□□□ -1
RIF1-201ENST00000243326 LONRF3Q496Y0 759 aa8.79□□□□□ -1
RIF1-201ENST00000243326 RSPH4AQ5TD94 716 aa8.79□□□□□ -1
RIF1-201ENST00000243326 PIP4K2AP48426 406 aaPredicted RBP8.79□□□□□ -1
RIF1-201ENST00000243326 ARHGAP29Q52LW3 1261 aa8.79□□□□□ -1
RIF1-201ENST00000243326 CCAR1Q8IX12 1150 aaKnown RBP8.79□□□□□ -1
RIF1-201ENST00000243326 CNKSR2Q8WXI2 1034 aa8.79□□□□□ -1
RIF1-201ENST00000243326 DNAJC25Q9H1X3 360 aa8.79□□□□□ -1
RIF1-201ENST00000243326 IDH1O75874 414 aaKnown RBP8.79□□□□□ -1
RIF1-201ENST00000243326 TRIM27P14373 513 aa8.79□□□□□ -1
RIF1-201ENST00000243326 AOPEPQ8N6M6 819 aa8.79□□□□□ -1
RIF1-201ENST00000243326 MX1P20591 662 aa8.79□□□□□ -1
RIF1-201ENST00000243326 GTF2A1P52655 376 aaPredicted RBP8.79□□□□□ -1
RIF1-201ENST00000243326 CRACR2AQ9BSW2 395 aa8.79□□□□□ -1
RIF1-201ENST00000243326 SPTY2D1Q68D10 685 aaPredicted RBP8.79□□□□□ -1
RIF1-201ENST00000243326 ARHGAP5Q13017 1502 aa8.78□□□□□ -1
RIF1-201ENST00000243326 SEPT7Q16181 437 aaKnown RBP8.78□□□□□ -1
RIF1-201ENST00000243326 MMRN2Q9H8L6 949 aa8.78□□□□□ -1
RIF1-201ENST00000243326 CFAP45Q9UL16 551 aa8.78□□□□□ -1
RIF1-201ENST00000243326 MINDY4BA8MYZ0 360 aa8.78□□□□□ -1
RIF1-201ENST00000243326 ABTB2Q8N961 1025 aa8.78□□□□□ -1
RIF1-201ENST00000243326 RBSNQ9H1K0 784 aa8.78□□□□□ -1
RIF1-201ENST00000243326 SFPQP23246 707 aaKnown RBP eCLIP8.78□□□□□ -1
RIF1-201ENST00000243326 MCM6Q14566 821 aa8.78□□□□□ -1
RIF1-201ENST00000243326 UBA5Q9GZZ9 404 aa8.78□□□□□ -1
RIF1-201ENST00000243326 CIZ1Q9ULV3 898 aaPredicted RBP8.78□□□□□ -1
RIF1-201ENST00000243326 UBE4AQ14139 1066 aa8.78□□□□□ -1
RIF1-201ENST00000243326 USP5P45974 858 aa8.78□□□□□ -1
RIF1-201ENST00000243326 TDO2P48775 406 aa8.78□□□□□ -1
RIF1-201ENST00000243326 KIF18AQ8NI77 898 aa8.78□□□□□ -1
RIF1-201ENST00000243326 JAKMIP3Q5VZ66 844 aa8.78□□□□□ -1
RIF1-201ENST00000243326 RLBP1P12271 317 aa8.78□□□□□ -1
RIF1-201ENST00000243326 TBC1D32Q96NH3 1257 aa8.78□□□□□ -1
RIF1-201ENST00000243326 CCP110O43303 1012 aa8.78□□□□□ -1
RIF1-201ENST00000243326 MCM2P49736 904 aa8.78□□□□□ -1
RIF1-201ENST00000243326 BICDL1Q6ZP65 573 aa8.78□□□□□ -1
RIF1-201ENST00000243326 EMILIN1Q9Y6C2 1016 aa8.78□□□□□ -1
RIF1-201ENST00000243326 DISP3Q9P2K9 1392 aa8.77□□□□□ -1
RIF1-201ENST00000243326 RAPGEF4Q8WZA2 1011 aa8.77□□□□□ -1
RIF1-201ENST00000243326 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.77□□□□□ -1
RIF1-201ENST00000243326 VPS18Q9P253 973 aa8.77□□□□□ -1
RIF1-201ENST00000243326 PAXIP1Q6ZW49 1069 aaPredicted RBP8.77□□□□□ -1
RIF1-201ENST00000243326 PUF60Q9UHX1 559 aaKnown RBP8.77□□□□□ -1
RIF1-201ENST00000243326 TIGD1Q96MW7 591 aa8.77□□□□□ -1.01
RIF1-201ENST00000243326 FAM160A1Q05DH4 1040 aa8.77□□□□□ -1.01
RIF1-201ENST00000243326 CHST3Q7LGC8 479 aa8.77□□□□□ -1.01
RIF1-201ENST00000243326 RHOXF2BP0C7M4 288 aa8.77□□□□□ -1.01
RIF1-201ENST00000243326 MAATS1Q7Z4T9 603 aa8.77□□□□□ -1.01
RIF1-201ENST00000243326 RHOXF2Q9BQY4 288 aa8.77□□□□□ -1.01
RIF1-201ENST00000243326 ZNF530Q6P9A1 599 aaPredicted RBP8.77□□□□□ -1.01
RIF1-201ENST00000243326 CBFA2T2O43439 604 aa8.77□□□□□ -1.01
RIF1-201ENST00000243326 XBP1P17861 261 aa8.77□□□□□ -1.01
RIF1-201ENST00000243326 DYDC1Q8WWB3 177 aa8.77□□□□□ -1.01
RIF1-201ENST00000243326 TMX3Q96JJ7 454 aa8.77□□□□□ -1.01
RIF1-201ENST00000243326 CALCOCO1Q9P1Z2 691 aa8.77□□□□□ -1.01
RIF1-201ENST00000243326 PRG4Q92954 1404 aaPredicted RBP8.77□□□□□ -1.01
RIF1-201ENST00000243326 MYD88Q99836 296 aa8.77□□□□□ -1.01
RIF1-201ENST00000243326 TBC1D2BQ9UPU7 963 aa8.77□□□□□ -1.01
RIF1-201ENST00000243326 MIA2Q96PC5 1412 aa8.77□□□□□ -1.01
RIF1-201ENST00000243326 PLEKHA4Q9H4M7 779 aa8.77□□□□□ -1.01
RIF1-201ENST00000243326 WAPLQ7Z5K2 1190 aa8.76□□□□□ -1.01
RIF1-201ENST00000243326 MICALL1Q8N3F8 863 aa8.76□□□□□ -1.01
RIF1-201ENST00000243326 CCDC12Q8WUD4 166 aaPredicted RBP8.76□□□□□ -1.01
RIF1-201ENST00000243326 NUP88Q99567 741 aaPredicted RBP8.76□□□□□ -1.01
RIF1-201ENST00000243326 DYNC1I1O14576 645 aa8.76□□□□□ -1.01
RIF1-201ENST00000243326 STX6O43752 255 aa8.76□□□□□ -1.01
RIF1-201ENST00000243326 RAB11FIP3O75154 756 aa8.76□□□□□ -1.01
RIF1-201ENST00000243326 DNAI1Q9UI46 699 aa8.76□□□□□ -1.01
RIF1-201ENST00000243326 TIAM1Q13009 1591 aa8.76□□□□□ -1.01
RIF1-201ENST00000243326 NKTRP30414 1462 aaKnown RBP8.76□□□□□ -1.01
RIF1-201ENST00000243326 CTR9Q6PD62 1173 aa8.76□□□□□ -1.01
RIF1-201ENST00000243326 CAPZA3Q96KX2 299 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 156.9 ms