RNA–Protein interactions for RNA: ENST00000238682.7

TGFB3-201, Transcript of transforming growth factor beta 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB3, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-201ENST00000238682 PCDH11XQ9BZA7 1347 aa12.22□□□□□ -0.45
TGFB3-201ENST00000238682 PCDH11YQ9BZA8 1340 aa12.22□□□□□ -0.45
TGFB3-201ENST00000238682 APBB1O00213 710 aa12.22□□□□□ -0.45
TGFB3-201ENST00000238682 GLIPR1L2Q4G1C9 344 aa12.22□□□□□ -0.45
TGFB3-201ENST00000238682 FCHSD2O94868 740 aa12.21□□□□□ -0.45
TGFB3-201ENST00000238682 BTAF1O14981 1849 aa12.21□□□□□ -0.46
TGFB3-201ENST00000238682 TATP17735 454 aaPredicted RBP12.2□□□□□ -0.46
TGFB3-201ENST00000238682 IL13P35225 146 aa12.2□□□□□ -0.46
TGFB3-201ENST00000238682 TXNRD1Q16881 649 aa12.2□□□□□ -0.46
TGFB3-201ENST00000238682 RGS22Q8NE09 1264 aa12.2□□□□□ -0.46
TGFB3-201ENST00000238682 ZCRB1Q8TBF4 217 aaKnown RBP12.2□□□□□ -0.46
TGFB3-201ENST00000238682 LY75O60449 1722 aa12.2□□□□□ -0.46
TGFB3-201ENST00000238682 SHANK3Q9BYB0 1731 aa12.2□□□□□ -0.46
TGFB3-201ENST00000238682 RAPGEF4Q8WZA2 1011 aa12.2□□□□□ -0.46
TGFB3-201ENST00000238682 KDRP35968 1356 aa12.2□□□□□ -0.46
TGFB3-201ENST00000238682 ZBED9Q6R2W3 1325 aa12.19□□□□□ -0.46
TGFB3-201ENST00000238682 RBM25P49756 843 aaKnown RBP12.19□□□□□ -0.46
TGFB3-201ENST00000238682 FAM182BQ5T319 152 aa12.19□□□□□ -0.46
TGFB3-201ENST00000238682 RUNDC1Q96C34 613 aa12.19□□□□□ -0.46
TGFB3-201ENST00000238682 PSDA5PKW4 1024 aaPredicted RBP12.18□□□□□ -0.46
TGFB3-201ENST00000238682 SLC15A2Q16348 729 aa12.18□□□□□ -0.46
TGFB3-201ENST00000238682 CCDC27Q2M243 656 aa12.18□□□□□ -0.46
TGFB3-201ENST00000238682 SMARCC1Q92922 1105 aaPredicted RBP12.18□□□□□ -0.46
TGFB3-201ENST00000238682 MTFR1LQ9H019 292 aa12.18□□□□□ -0.46
TGFB3-201ENST00000238682 ZNF831Q5JPB2 1677 aa12.18□□□□□ -0.46
TGFB3-201ENST00000238682 NEFMP07197 916 aa12.18□□□□□ -0.46
TGFB3-201ENST00000238682 FLAD1Q8NFF5 587 aa12.18□□□□□ -0.46
TGFB3-201ENST00000238682 DOT1LQ8TEK3 1739 aa12.18□□□□□ -0.46
TGFB3-201ENST00000238682 IGSF1Q8N6C5 1336 aa12.18□□□□□ -0.46
TGFB3-201ENST00000238682 MEGF6O75095 1541 aa12.18□□□□□ -0.46
TGFB3-201ENST00000238682 SOX12O15370 315 aa12.17□□□□□ -0.46
TGFB3-201ENST00000238682 BRD2P25440 801 aaKnown RBP12.17□□□□□ -0.46
TGFB3-201ENST00000238682 HNRNPUQ00839 825 aaKnown RBP eCLIP12.17□□□□□ -0.46
TGFB3-201ENST00000238682 FAM9BQ8IZU0 186 aa12.17□□□□□ -0.46
TGFB3-201ENST00000238682 SLC24A3Q9HC58 644 aa12.17□□□□□ -0.46
TGFB3-201ENST00000238682 EMILIN1Q9Y6C2 1016 aa12.17□□□□□ -0.46
TGFB3-201ENST00000238682 NKX1-1Q15270 411 aaPredicted RBP12.16□□□□□ -0.46
TGFB3-201ENST00000238682 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.16□□□□□ -0.46
TGFB3-201ENST00000238682 SPG7Q9UQ90 795 aa12.16□□□□□ -0.46
TGFB3-201ENST00000238682 TNNT2P45379 298 aaPredicted RBP12.16□□□□□ -0.46
TGFB3-201ENST00000238682 SALL2Q9Y467 1007 aaPredicted RBP12.16□□□□□ -0.46
TGFB3-201ENST00000238682 ADAMTS8Q9UP79 889 aa12.15□□□□□ -0.46
TGFB3-201ENST00000238682 MYCNP04198 464 aaPredicted RBP12.15□□□□□ -0.46
TGFB3-201ENST00000238682 HSP90AB1P08238 724 aaKnown RBP12.15□□□□□ -0.46
TGFB3-201ENST00000238682 EIF4A2Q14240 407 aaKnown RBP12.15□□□□□ -0.46
TGFB3-201ENST00000238682 PPP1R1BQ9UD71 204 aaPredicted RBP12.15□□□□□ -0.46
TGFB3-201ENST00000238682 LMOD3Q0VAK6 560 aa12.14□□□□□ -0.47
TGFB3-201ENST00000238682 RRS1Q15050 365 aaKnown RBP12.14□□□□□ -0.47
TGFB3-201ENST00000238682 CICQ96RK0 1608 aaPredicted RBP12.14□□□□□ -0.47
TGFB3-201ENST00000238682 U2AF1L5P0DN76 240 aaPredicted RBP12.13□□□□□ -0.47
TGFB3-201ENST00000238682 U2AF1Q01081 240 aaKnown RBP eCLIP12.13□□□□□ -0.47
TGFB3-201ENST00000238682 PROM2Q8N271 834 aa12.13□□□□□ -0.47
TGFB3-201ENST00000238682 AKT1S1Q96B36 256 aa12.13□□□□□ -0.47
TGFB3-201ENST00000238682 HTATSF1O43719 755 aaKnown RBP12.13□□□□□ -0.47
TGFB3-201ENST00000238682 PLEKHF1Q96S99 279 aa12.13□□□□□ -0.47
TGFB3-201ENST00000238682 MAPK8IP3Q9UPT6 1336 aa12.13□□□□□ -0.47
TGFB3-201ENST00000238682 CALD1Q05682 793 aaKnown RBP12.12□□□□□ -0.47
TGFB3-201ENST00000238682 PDE4CQ08493 712 aa12.12□□□□□ -0.47
TGFB3-201ENST00000238682 IL16Q14005 1332 aa12.12□□□□□ -0.47
TGFB3-201ENST00000238682 NBPF6Q5VWK0 638 aa12.11□□□□□ -0.47
TGFB3-201ENST00000238682 NBPF4Q96M43 638 aa12.11□□□□□ -0.47
TGFB3-201ENST00000238682 AMOTQ4VCS5 1084 aa12.11□□□□□ -0.47
TGFB3-201ENST00000238682 HSP90AB2PQ58FF8 381 aa12.11□□□□□ -0.47
TGFB3-201ENST00000238682 C5P01031 1676 aa12.1□□□□□ -0.47
TGFB3-201ENST00000238682 POLD1P28340 1107 aa12.1□□□□□ -0.47
TGFB3-201ENST00000238682 WDR63Q8IWG1 891 aa12.1□□□□□ -0.47
TGFB3-201ENST00000238682 U2SURPO15042 1029 aaKnown RBP12.1□□□□□ -0.47
TGFB3-201ENST00000238682 PPM1GO15355 546 aaPredicted RBP12.1□□□□□ -0.47
TGFB3-201ENST00000238682 GAS2L2Q8NHY3 880 aa12.1□□□□□ -0.47
TGFB3-201ENST00000238682 ZNF521Q96K83 1311 aa12.09□□□□□ -0.47
TGFB3-201ENST00000238682 LTV1Q96GA3 475 aaPredicted RBP12.09□□□□□ -0.47
TGFB3-201ENST00000238682 SUPT16HQ9Y5B9 1047 aaKnown RBP12.09□□□□□ -0.47
TGFB3-201ENST00000238682 RGPD2P0DJD1 1756 aa12.09□□□□□ -0.47
TGFB3-201ENST00000238682 DDX54Q8TDD1 881 aaKnown RBP12.09□□□□□ -0.47
TGFB3-201ENST00000238682 SGIP1Q9BQI5 828 aa12.09□□□□□ -0.47
TGFB3-201ENST00000238682 PTGER2P43116 358 aa12.08□□□□□ -0.48
TGFB3-201ENST00000238682 EYA1Q99502 592 aa12.08□□□□□ -0.48
TGFB3-201ENST00000238682 ADAMTS7Q9UKP4 1686 aa12.08□□□□□ -0.48
TGFB3-201ENST00000238682 NFE2L2Q16236 605 aa12.08□□□□□ -0.48
TGFB3-201ENST00000238682 IFNL2Q8IZJ0 200 aa12.08□□□□□ -0.48
TGFB3-201ENST00000238682 BABAM1Q9NWV8 329 aa12.08□□□□□ -0.48
TGFB3-201ENST00000238682 ERVV-2B6SEH9 535 aa12.07□□□□□ -0.48
TGFB3-201ENST00000238682 ACSBG1Q96GR2 724 aa12.07□□□□□ -0.48
TGFB3-201ENST00000238682 PALLDQ8WX93 1383 aa12.07□□□□□ -0.48
TGFB3-201ENST00000238682 PRIM1P49642 420 aaKnown RBP12.07□□□□□ -0.48
TGFB3-201ENST00000238682 PLEKHO1Q53GL0 409 aaPredicted RBP12.07□□□□□ -0.48
TGFB3-201ENST00000238682 AEBP1Q8IUX7 1158 aa12.07□□□□□ -0.48
TGFB3-201ENST00000238682 CCNL1Q9UK58 526 aaPredicted RBP12.07□□□□□ -0.48
TGFB3-201ENST00000238682 TOGARAM1Q9Y4F4 1720 aa12.07□□□□□ -0.48
TGFB3-201ENST00000238682 HMGB1P09429 215 aaKnown RBP12.06□□□□□ -0.48
TGFB3-201ENST00000238682 PRKAR2BP31323 418 aa12.06□□□□□ -0.48
TGFB3-201ENST00000238682 SPDYE4A6NLX3 237 aa12.05□□□□□ -0.48
TGFB3-201ENST00000238682 DEKP35659 375 aaKnown RBP12.05□□□□□ -0.48
TGFB3-201ENST00000238682 TMPOP42166 694 aaKnown RBP12.05□□□□□ -0.48
TGFB3-201ENST00000238682 SULT6B1Q6IMI4 303 aa12.05□□□□□ -0.48
TGFB3-201ENST00000238682 FANCIQ9NVI1 1328 aa12.05□□□□□ -0.48
TGFB3-201ENST00000238682 CT47B1P0C2W7 299 aaPredicted RBP12.05□□□□□ -0.48
TGFB3-201ENST00000238682 CCDC82Q8N4S0 544 aa12.05□□□□□ -0.48
TGFB3-201ENST00000238682 C4BP0C0L5 1744 aa12.05□□□□□ -0.48
TGFB3-201ENST00000238682 SSFA2P28290 1259 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms