RNA–Protein interactions for RNA: ENST00000238628.10

IFT43-201, Transcript of intraflagellar transport 43, humanhuman

TSL 1 (best) BASIC

Gene IFT43, Length 816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-201ENST00000238628 SMARCC1Q92922 1105 aaPredicted RBP11.82□□□□□ -0.52
IFT43-201ENST00000238628 ZC3H4Q9UPT8 1303 aaKnown RBP11.82□□□□□ -0.52
IFT43-201ENST00000238628 UBR3Q6ZT12 1888 aa11.81□□□□□ -0.52
IFT43-201ENST00000238628 GNPATO15228 680 aa11.81□□□□□ -0.52
IFT43-201ENST00000238628 VEGFBP49765 207 aa11.81□□□□□ -0.52
IFT43-201ENST00000238628 TMF1P82094 1093 aa11.81□□□□□ -0.52
IFT43-201ENST00000238628 NLGN1Q8N2Q7 840 aa11.81□□□□□ -0.52
IFT43-201ENST00000238628 SLC12A5Q9H2X9 1139 aa11.81□□□□□ -0.52
IFT43-201ENST00000238628 PDE4DIPQ5VU43 2346 aa11.81□□□□□ -0.52
IFT43-201ENST00000238628 TOGARAM1Q9Y4F4 1720 aa11.8□□□□□ -0.52
IFT43-201ENST00000238628 PARP3Q9Y6F1 533 aa11.8□□□□□ -0.52
IFT43-201ENST00000238628 ARFGEF1Q9Y6D6 1849 aa11.8□□□□□ -0.52
IFT43-201ENST00000238628 SBNO2Q9Y2G9 1366 aa11.79□□□□□ -0.52
IFT43-201ENST00000238628 CHADLQ6NUI6 762 aa11.79□□□□□ -0.52
IFT43-201ENST00000238628 IP6K1Q92551 441 aa11.79□□□□□ -0.52
IFT43-201ENST00000238628 TERF2IPQ9NYB0 399 aa11.79□□□□□ -0.52
IFT43-201ENST00000238628 SBF1O95248 1867 aa11.78□□□□□ -0.52
IFT43-201ENST00000238628 CD163L1Q9NR16 1453 aa11.78□□□□□ -0.52
IFT43-201ENST00000238628 POTECB2RU33 542 aa11.78□□□□□ -0.52
IFT43-201ENST00000238628 RASSF7Q02833 373 aa11.78□□□□□ -0.52
IFT43-201ENST00000238628 LINC00116Q8NCU8 138 aa11.78□□□□□ -0.52
IFT43-201ENST00000238628 CARD11Q9BXL7 1154 aa11.78□□□□□ -0.52
IFT43-201ENST00000238628 BRCA1P38398 1863 aaKnown RBP11.78□□□□□ -0.52
IFT43-201ENST00000238628 LMNB1P20700 586 aa11.77□□□□□ -0.53
IFT43-201ENST00000238628 TRAPPC3LQ5T215 181 aa11.77□□□□□ -0.53
IFT43-201ENST00000238628 DPY19L2Q6NUT2 758 aa11.77□□□□□ -0.53
IFT43-201ENST00000238628 LOC102724428A0A0B4J2F2 783 aa11.76□□□□□ -0.53
IFT43-201ENST00000238628 SIK1P57059 783 aa11.76□□□□□ -0.53
IFT43-201ENST00000238628 MAP2K1Q02750 393 aaPredicted RBP11.76□□□□□ -0.53
IFT43-201ENST00000238628 EDC4Q6P2E9 1401 aaKnown RBP11.76□□□□□ -0.53
IFT43-201ENST00000238628 AMPHP49418 695 aa11.75□□□□□ -0.53
IFT43-201ENST00000238628 MEGF6O75095 1541 aa11.75□□□□□ -0.53
IFT43-201ENST00000238628 FAM208AQ9UK61 1670 aaKnown RBP11.75□□□□□ -0.53
IFT43-201ENST00000238628 RGPD2P0DJD1 1756 aa11.74□□□□□ -0.53
IFT43-201ENST00000238628 TMEM88BA6NKF7 163 aa11.74□□□□□ -0.53
IFT43-201ENST00000238628 CHRNA5P30532 468 aa11.74□□□□□ -0.53
IFT43-201ENST00000238628 HOXC9P31274 260 aa11.74□□□□□ -0.53
IFT43-201ENST00000238628 RAPGEF4Q8WZA2 1011 aa11.74□□□□□ -0.53
IFT43-201ENST00000238628 COG3Q96JB2 828 aa11.74□□□□□ -0.53
IFT43-201ENST00000238628 PUS7Q96PZ0 661 aaKnown RBP11.74□□□□□ -0.53
IFT43-201ENST00000238628 RTCBQ9Y3I0 505 aaKnown RBP11.74□□□□□ -0.53
IFT43-201ENST00000238628 A0A1W2PP64 1363 aa11.74□□□□□ -0.53
IFT43-201ENST00000238628 FBLN1P23142 703 aa11.73□□□□□ -0.53
IFT43-201ENST00000238628 ATP6V1AP38606 617 aa11.73□□□□□ -0.53
IFT43-201ENST00000238628 CGNL1Q0VF96 1302 aa11.73□□□□□ -0.53
IFT43-201ENST00000238628 PIGBQ92521 554 aa11.73□□□□□ -0.53
IFT43-201ENST00000238628 BEGAINQ9BUH8 593 aa11.73□□□□□ -0.53
IFT43-201ENST00000238628 C4AP0C0L4 1744 aa11.72□□□□□ -0.53
IFT43-201ENST00000238628 KDM6AO15550 1401 aaPredicted RBP11.72□□□□□ -0.53
IFT43-201ENST00000238628 MAP3K19Q56UN5 1328 aa11.72□□□□□ -0.53
IFT43-201ENST00000238628 PCDH11XQ9BZA7 1347 aa11.72□□□□□ -0.53
IFT43-201ENST00000238628 PCDH11YQ9BZA8 1340 aa11.72□□□□□ -0.53
IFT43-201ENST00000238628 POTEIP0CG38 1075 aa11.72□□□□□ -0.53
IFT43-201ENST00000238628 POTEJP0CG39 1038 aa11.72□□□□□ -0.53
IFT43-201ENST00000238628 GYS1P13807 737 aa11.72□□□□□ -0.53
IFT43-201ENST00000238628 TATP17735 454 aaPredicted RBP11.72□□□□□ -0.53
IFT43-201ENST00000238628 RFC4P35249 363 aa11.72□□□□□ -0.53
IFT43-201ENST00000238628 ITPK1Q13572 414 aa11.72□□□□□ -0.53
IFT43-201ENST00000238628 DEFB115Q30KQ5 88 aa11.72□□□□□ -0.53
IFT43-201ENST00000238628 ARHGEF1Q92888 912 aaKnown RBP11.72□□□□□ -0.53
IFT43-201ENST00000238628 PASKQ96RG2 1323 aa11.71□□□□□ -0.53
IFT43-201ENST00000238628 USHBP1Q8N6Y0 703 aa11.71□□□□□ -0.53
IFT43-201ENST00000238628 VIRMAQ69YN4 1812 aaKnown RBP11.71□□□□□ -0.54
IFT43-201ENST00000238628 WDR33Q9C0J8 1336 aaKnown RBP11.7□□□□□ -0.54
IFT43-201ENST00000238628 PRPF38BQ5VTL8 546 aaKnown RBP11.7□□□□□ -0.54
IFT43-201ENST00000238628 NBPF6Q5VWK0 638 aa11.7□□□□□ -0.54
IFT43-201ENST00000238628 NBPF4Q96M43 638 aa11.7□□□□□ -0.54
IFT43-201ENST00000238628 MCOLN1Q9GZU1 580 aa11.7□□□□□ -0.54
IFT43-201ENST00000238628 RASSF10A6NK89 507 aa11.68□□□□□ -0.54
IFT43-201ENST00000238628 CYP27B1O15528 508 aa11.68□□□□□ -0.54
IFT43-201ENST00000238628 RRS1Q15050 365 aaKnown RBP11.68□□□□□ -0.54
IFT43-201ENST00000238628 ASAP1Q9ULH1 1129 aa11.68□□□□□ -0.54
IFT43-201ENST00000238628 ST20-MTHFSA0A0A6YYL1 179 aa11.67□□□□□ -0.54
IFT43-201ENST00000238628 SLC24A1O60721 1099 aa11.67□□□□□ -0.54
IFT43-201ENST00000238628 ERFEQ4G0M1 354 aa11.67□□□□□ -0.54
IFT43-201ENST00000238628 LDHDQ86WU2 507 aa11.67□□□□□ -0.54
IFT43-201ENST00000238628 TSKSQ9UJT2 592 aa11.67□□□□□ -0.54
IFT43-201ENST00000238628 ABT1Q9ULW3 272 aaKnown RBP11.67□□□□□ -0.54
IFT43-201ENST00000238628 ITGB4P16144 1822 aa11.67□□□□□ -0.54
IFT43-201ENST00000238628 CCDC88AQ3V6T2 1871 aa11.66□□□□□ -0.54
IFT43-201ENST00000238628 MAP2P11137 1827 aaKnown RBP11.66□□□□□ -0.54
IFT43-201ENST00000238628 DDNO94850 711 aaPredicted RBP11.66□□□□□ -0.54
IFT43-201ENST00000238628 TMOD3Q9NYL9 352 aa11.66□□□□□ -0.54
IFT43-201ENST00000238628 TIAM2Q8IVF5 1701 aa11.66□□□□□ -0.54
IFT43-201ENST00000238628 NFKBIEO00221 500 aa11.65□□□□□ -0.54
IFT43-201ENST00000238628 FYB1O15117 783 aa11.65□□□□□ -0.54
IFT43-201ENST00000238628 RPS6KA4O75676 772 aa11.65□□□□□ -0.54
IFT43-201ENST00000238628 ITGBL1O95965 494 aaPredicted RBP11.65□□□□□ -0.54
IFT43-201ENST00000238628 DDR1Q08345 913 aa11.65□□□□□ -0.54
IFT43-201ENST00000238628 GRM1Q13255 1194 aa11.65□□□□□ -0.54
IFT43-201ENST00000238628 DGKZQ13574 1117 aa11.65□□□□□ -0.54
IFT43-201ENST00000238628 PAXIP1Q6ZW49 1069 aaPredicted RBP11.65□□□□□ -0.54
IFT43-201ENST00000238628 TESK2Q96S53 571 aa11.65□□□□□ -0.54
IFT43-201ENST00000238628 GGNBP2Q9H3C7 697 aa11.65□□□□□ -0.54
IFT43-201ENST00000238628 ZNF219Q9P2Y4 722 aaPredicted RBP11.65□□□□□ -0.54
IFT43-201ENST00000238628 CLEC11AQ9Y240 323 aa11.65□□□□□ -0.54
IFT43-201ENST00000238628 RTL1A6NKG5 1358 aa11.65□□□□□ -0.55
IFT43-201ENST00000238628 TONSLQ96HA7 1378 aa11.65□□□□□ -0.55
IFT43-201ENST00000238628 SMG6Q86US8 1419 aaKnown RBP11.64□□□□□ -0.55
IFT43-201ENST00000238628 IQCA1LA6NCM1 817 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms