RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 DDX58O95786 925 aaKnown RBP14.19□□□□□ -0.14
TNFAIP3-201ENST00000237289 ZNF790Q6PG37 636 aa14.19□□□□□ -0.14
TNFAIP3-201ENST00000237289 MARCH10Q8NA82 808 aaPredicted RBP14.19□□□□□ -0.14
TNFAIP3-201ENST00000237289 BCL11BQ9C0K0 894 aaPredicted RBP14.19□□□□□ -0.14
TNFAIP3-201ENST00000237289 BAG6P46379 1132 aa14.19□□□□□ -0.14
TNFAIP3-201ENST00000237289 BABAM1Q9NWV8 329 aa14.19□□□□□ -0.14
TNFAIP3-201ENST00000237289 FANCIQ9NVI1 1328 aa14.18□□□□□ -0.14
TNFAIP3-201ENST00000237289 SLIT2O94813 1529 aa14.18□□□□□ -0.14
TNFAIP3-201ENST00000237289 AIMP1Q12904 312 aaKnown RBP14.18□□□□□ -0.14
TNFAIP3-201ENST00000237289 SUPT16HQ9Y5B9 1047 aaKnown RBP14.18□□□□□ -0.14
TNFAIP3-201ENST00000237289 POTEAQ6S8J7 498 aa14.18□□□□□ -0.14
TNFAIP3-201ENST00000237289 CT47B1P0C2W7 299 aaPredicted RBP14.17□□□□□ -0.14
TNFAIP3-201ENST00000237289 SLC4A10Q6U841 1118 aa14.17□□□□□ -0.14
TNFAIP3-201ENST00000237289 ZBTB47Q9UFB7 747 aaPredicted RBP14.17□□□□□ -0.14
TNFAIP3-201ENST00000237289 LRP6O75581 1613 aa14.17□□□□□ -0.14
TNFAIP3-201ENST00000237289 MYL6BP14649 208 aa14.16□□□□□ -0.14
TNFAIP3-201ENST00000237289 FKBP5Q13451 457 aaPredicted RBP14.16□□□□□ -0.14
TNFAIP3-201ENST00000237289 COL3A1P02461 1466 aaPredicted RBP14.16□□□□□ -0.14
TNFAIP3-201ENST00000237289 BCL9LQ86UU0 1499 aa14.16□□□□□ -0.14
TNFAIP3-201ENST00000237289 CCNL1Q9UK58 526 aaPredicted RBP14.16□□□□□ -0.14
TNFAIP3-201ENST00000237289 MEGF6O75095 1541 aa14.16□□□□□ -0.14
TNFAIP3-201ENST00000237289 AK7Q96M32 723 aa14.16□□□□□ -0.14
TNFAIP3-201ENST00000237289 ABCC6O95255 1503 aa14.16□□□□□ -0.14
TNFAIP3-201ENST00000237289 PHRF1Q9P1Y6 1649 aaKnown RBP14.15□□□□□ -0.14
TNFAIP3-201ENST00000237289 CHL1O00533 1208 aa14.15□□□□□ -0.14
TNFAIP3-201ENST00000237289 SLC4A2P04920 1241 aa14.15□□□□□ -0.14
TNFAIP3-201ENST00000237289 NEXNQ0ZGT2 675 aa14.15□□□□□ -0.14
TNFAIP3-201ENST00000237289 CHMP4BQ9H444 224 aaKnown RBP14.15□□□□□ -0.14
TNFAIP3-201ENST00000237289 KIF6Q6ZMV9 814 aa14.15□□□□□ -0.14
TNFAIP3-201ENST00000237289 PIGBQ92521 554 aa14.15□□□□□ -0.14
TNFAIP3-201ENST00000237289 ZNF428Q96B54 188 aa14.15□□□□□ -0.14
TNFAIP3-201ENST00000237289 LTN1O94822 1766 aa14.15□□□□□ -0.14
TNFAIP3-201ENST00000237289 GTF2E1P29083 439 aaPredicted RBP14.15□□□□□ -0.14
TNFAIP3-201ENST00000237289 RIC3Q7Z5B4 369 aa14.15□□□□□ -0.14
TNFAIP3-201ENST00000237289 NCAPD2Q15021 1401 aa14.14□□□□□ -0.15
TNFAIP3-201ENST00000237289 ASAP1Q9ULH1 1129 aa14.14□□□□□ -0.15
TNFAIP3-201ENST00000237289 SHPRHQ149N8 1683 aa14.13□□□□□ -0.15
TNFAIP3-201ENST00000237289 CLUAP1Q96AJ1 413 aa14.13□□□□□ -0.15
TNFAIP3-201ENST00000237289 ZNF496Q96IT1 587 aaPredicted RBP14.13□□□□□ -0.15
TNFAIP3-201ENST00000237289 KCNQ2O43526 872 aa14.13□□□□□ -0.15
TNFAIP3-201ENST00000237289 ZKSCAN2Q63HK3 967 aa14.13□□□□□ -0.15
TNFAIP3-201ENST00000237289 KIF16BQ96L93 1317 aa14.13□□□□□ -0.15
TNFAIP3-201ENST00000237289 NBPF14Q5TI25 921 aa14.12□□□□□ -0.15
TNFAIP3-201ENST00000237289 API5Q9BZZ5 524 aaKnown RBP14.12□□□□□ -0.15
TNFAIP3-201ENST00000237289 DBF4Q9UBU7 674 aaPredicted RBP14.12□□□□□ -0.15
TNFAIP3-201ENST00000237289 NKX1-1Q15270 411 aaPredicted RBP14.12□□□□□ -0.15
TNFAIP3-201ENST00000237289 BCL11AQ9H165 835 aa14.12□□□□□ -0.15
TNFAIP3-201ENST00000237289 IRX6P78412 446 aaPredicted RBP14.11□□□□□ -0.15
TNFAIP3-201ENST00000237289 ATRNO75882 1429 aa14.11□□□□□ -0.15
TNFAIP3-201ENST00000237289 TNS2Q63HR2 1409 aa14.11□□□□□ -0.15
TNFAIP3-201ENST00000237289 LOC102724428A0A0B4J2F2 783 aa14.11□□□□□ -0.15
TNFAIP3-201ENST00000237289 SIK1P57059 783 aa14.11□□□□□ -0.15
TNFAIP3-201ENST00000237289 C8orf58Q8NAV2 365 aa14.11□□□□□ -0.15
TNFAIP3-201ENST00000237289 KCNQ3O43525 872 aa14.11□□□□□ -0.15
TNFAIP3-201ENST00000237289 PEAK1Q9H792 1746 aa14.1□□□□□ -0.15
TNFAIP3-201ENST00000237289 ZPR1O75312 459 aa14.1□□□□□ -0.15
TNFAIP3-201ENST00000237289 EIF4A1P60842 406 aaKnown RBP14.1□□□□□ -0.15
TNFAIP3-201ENST00000237289 ITPRIPQ8IWB1 547 aa14.1□□□□□ -0.15
TNFAIP3-201ENST00000237289 COL22A1Q8NFW1 1626 aaPredicted RBP14.1□□□□□ -0.15
TNFAIP3-201ENST00000237289 KRT24Q2M2I5 525 aa14.1□□□□□ -0.15
TNFAIP3-201ENST00000237289 HYPKQ9NX55 129 aa14.1□□□□□ -0.15
TNFAIP3-201ENST00000237289 DNAJC10Q8IXB1 793 aa14.1□□□□□ -0.15
TNFAIP3-201ENST00000237289 TFCP2L1Q9NZI6 479 aa14.1□□□□□ -0.15
TNFAIP3-201ENST00000237289 HDAC5Q9UQL6 1122 aa14.1□□□□□ -0.15
TNFAIP3-201ENST00000237289 PLEKHG2Q9H7P9 1386 aa14.09□□□□□ -0.15
TNFAIP3-201ENST00000237289 RTCBQ9Y3I0 505 aaKnown RBP14.09□□□□□ -0.15
TNFAIP3-201ENST00000237289 PHF14O94880 888 aa14.09□□□□□ -0.15
TNFAIP3-201ENST00000237289 FKBP8Q14318 412 aa14.09□□□□□ -0.15
TNFAIP3-201ENST00000237289 SPINK5Q9NQ38 1064 aaPredicted RBP14.09□□□□□ -0.15
TNFAIP3-201ENST00000237289 STK32BQ9NY57 414 aa14.08□□□□□ -0.15
TNFAIP3-201ENST00000237289 PALLDQ8WX93 1383 aa14.08□□□□□ -0.15
TNFAIP3-201ENST00000237289 SOS1Q07889 1333 aaPredicted RBP14.08□□□□□ -0.16
TNFAIP3-201ENST00000237289 HOXB7P09629 217 aa14.08□□□□□ -0.16
TNFAIP3-201ENST00000237289 A0A087WZG4 1122 aa14.08□□□□□ -0.16
TNFAIP3-201ENST00000237289 ATG3Q9NT62 314 aa14.08□□□□□ -0.16
TNFAIP3-201ENST00000237289 RFC4P35249 363 aa14.08□□□□□ -0.16
TNFAIP3-201ENST00000237289 ALDH1L2Q3SY69 923 aa14.08□□□□□ -0.16
TNFAIP3-201ENST00000237289 TSPYL6Q8N831 410 aa14.07□□□□□ -0.16
TNFAIP3-201ENST00000237289 GNPATO15228 680 aa14.07□□□□□ -0.16
TNFAIP3-201ENST00000237289 ZNF652Q9Y2D9 606 aa14.07□□□□□ -0.16
TNFAIP3-201ENST00000237289 ONECUT3O60422 494 aaPredicted RBP14.07□□□□□ -0.16
TNFAIP3-201ENST00000237289 GIGYF1O75420 1035 aaPredicted RBP14.06□□□□□ -0.16
TNFAIP3-201ENST00000237289 SSH1Q8WYL5 1049 aa14.06□□□□□ -0.16
TNFAIP3-201ENST00000237289 C9orf78Q9NZ63 289 aaPredicted RBP14.06□□□□□ -0.16
TNFAIP3-201ENST00000237289 CHPF2Q9P2E5 772 aa14.06□□□□□ -0.16
TNFAIP3-201ENST00000237289 ANXA1P04083 346 aa14.06□□□□□ -0.16
TNFAIP3-201ENST00000237289 NOB1Q9ULX3 412 aaKnown RBP14.06□□□□□ -0.16
TNFAIP3-201ENST00000237289 PLIN1O60240 522 aa14.06□□□□□ -0.16
TNFAIP3-201ENST00000237289 BCAR3O75815 825 aa14.06□□□□□ -0.16
TNFAIP3-201ENST00000237289 VAMP4O75379 141 aa14.06□□□□□ -0.16
TNFAIP3-201ENST00000237289 PIP4K2AP48426 406 aaPredicted RBP14.06□□□□□ -0.16
TNFAIP3-201ENST00000237289 DZIP1LQ8IYY4 767 aaKnown RBP14.06□□□□□ -0.16
TNFAIP3-201ENST00000237289 CCDC87Q9NVE4 849 aa14.06□□□□□ -0.16
TNFAIP3-201ENST00000237289 RARSP54136 660 aaKnown RBP14.05□□□□□ -0.16
TNFAIP3-201ENST00000237289 USP16Q9Y5T5 823 aa14.05□□□□□ -0.16
TNFAIP3-201ENST00000237289 A1BGP04217 495 aa14.04□□□□□ -0.16
TNFAIP3-201ENST00000237289 ZNF853P0CG23 659 aa14.04□□□□□ -0.16
TNFAIP3-201ENST00000237289 VSIG10Q8N0Z9 540 aa14.04□□□□□ -0.16
TNFAIP3-201ENST00000237289 FAM177BA6PVY3 158 aa14.04□□□□□ -0.16
TNFAIP3-201ENST00000237289 KCNQ4P56696 695 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms