RNA–Protein interactions for RNA: ENST00000233573.6

ITGA4-201, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best)

Gene ITGA4, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-201ENST00000233573 NUCB1Q02818 461 aa20.13■□□□□ 0.81
ITGA4-201ENST00000233573 AMOTQ4VCS5 1084 aa20.13■□□□□ 0.81
ITGA4-201ENST00000233573 AKAP4Q5JQC9 854 aa20.13■□□□□ 0.81
ITGA4-201ENST00000233573 MPRIPQ6WCQ1 1025 aa20.13■□□□□ 0.81
ITGA4-201ENST00000233573 G2E3Q7L622 706 aa20.13■□□□□ 0.81
ITGA4-201ENST00000233573 RAPGEF4Q8WZA2 1011 aa20.13■□□□□ 0.81
ITGA4-201ENST00000233573 PHLPP1O60346 1717 aa20.11■□□□□ 0.81
ITGA4-201ENST00000233573 ADAMTS7Q9UKP4 1686 aa20.11■□□□□ 0.81
ITGA4-201ENST00000233573 OVOS2A0A0G2JMS6 1433 aa20.11■□□□□ 0.81
ITGA4-201ENST00000233573 C1orf141Q5JVX7 400 aa20.11■□□□□ 0.81
ITGA4-201ENST00000233573 WDR17Q8IZU2 1322 aa20.1■□□□□ 0.81
ITGA4-201ENST00000233573 GCC1Q96CN9 775 aa20.1■□□□□ 0.81
ITGA4-201ENST00000233573 STRN4Q9NRL3 753 aa20.1■□□□□ 0.81
ITGA4-201ENST00000233573 COL16A1Q07092 1604 aaPredicted RBP20.09■□□□□ 0.81
ITGA4-201ENST00000233573 ATP10DQ9P241 1426 aa20.09■□□□□ 0.81
ITGA4-201ENST00000233573 TATP17735 454 aaPredicted RBP20.09■□□□□ 0.81
ITGA4-201ENST00000233573 CCDC30Q5VVM6 783 aa20.09■□□□□ 0.81
ITGA4-201ENST00000233573 N4BP2Q86UW6 1770 aaPredicted RBP20.09■□□□□ 0.81
ITGA4-201ENST00000233573 TOM1L2Q6ZVM7 507 aa20.09■□□□□ 0.81
ITGA4-201ENST00000233573 ZBTB47Q9UFB7 747 aaPredicted RBP20.09■□□□□ 0.81
ITGA4-201ENST00000233573 SIPA1L3O60292 1781 aaPredicted RBP20.08■□□□□ 0.81
ITGA4-201ENST00000233573 COL22A1Q8NFW1 1626 aaPredicted RBP20.08■□□□□ 0.81
ITGA4-201ENST00000233573 SEC24BO95487 1268 aa20.07■□□□□ 0.8
ITGA4-201ENST00000233573 CHD1LQ86WJ1 897 aa20.07■□□□□ 0.8
ITGA4-201ENST00000233573 STK31Q9BXU1 1019 aa20.07■□□□□ 0.8
ITGA4-201ENST00000233573 RNMTO43148 476 aaKnown RBP20.07■□□□□ 0.8
ITGA4-201ENST00000233573 EIF4A1P60842 406 aaKnown RBP20.07■□□□□ 0.8
ITGA4-201ENST00000233573 LARP1Q6PKG0 1096 aaKnown RBP20.07■□□□□ 0.8
ITGA4-201ENST00000233573 ERICH6Q7L0X2 663 aa20.07■□□□□ 0.8
ITGA4-201ENST00000233573 TOM1O60784 492 aa20.06■□□□□ 0.8
ITGA4-201ENST00000233573 PKD1L3Q7Z443 1732 aa20.05■□□□□ 0.8
ITGA4-201ENST00000233573 FLIIQ13045 1269 aa20.05■□□□□ 0.8
ITGA4-201ENST00000233573 AEBP2Q6ZN18 517 aaPredicted RBP20.05■□□□□ 0.8
ITGA4-201ENST00000233573 F6X3S4 739 aa20.04■□□□□ 0.8
ITGA4-201ENST00000233573 TEFQ10587 303 aa20.04■□□□□ 0.8
ITGA4-201ENST00000233573 ANKRD44Q8N8A2 993 aa20.04■□□□□ 0.8
ITGA4-201ENST00000233573 MEIS3Q99687 375 aa20.04■□□□□ 0.8
ITGA4-201ENST00000233573 UBAP1LF5GYI3 381 aa20.04■□□□□ 0.8
ITGA4-201ENST00000233573 KCNQ3O43525 872 aa20.04■□□□□ 0.8
ITGA4-201ENST00000233573 HOXB7P09629 217 aa20.04■□□□□ 0.8
ITGA4-201ENST00000233573 CCT4P50991 539 aaKnown RBP20.04■□□□□ 0.8
ITGA4-201ENST00000233573 EVA1CP58658 441 aa20.04■□□□□ 0.8
ITGA4-201ENST00000233573 DDRGK1Q96HY6 314 aa20.04■□□□□ 0.8
ITGA4-201ENST00000233573 LNPKQ9C0E8 428 aa20.04■□□□□ 0.8
ITGA4-201ENST00000233573 BTG4Q9NY30 223 aa20.04■□□□□ 0.8
ITGA4-201ENST00000233573 KDM6AO15550 1401 aaPredicted RBP20.03■□□□□ 0.8
ITGA4-201ENST00000233573 PHKG2P15735 406 aa20.03■□□□□ 0.8
ITGA4-201ENST00000233573 RPAP2Q8IXW5 612 aaPredicted RBP20.03■□□□□ 0.8
ITGA4-201ENST00000233573 SPG7Q9UQ90 795 aa20.03■□□□□ 0.8
ITGA4-201ENST00000233573 CEP85Q6P2H3 762 aa20.03■□□□□ 0.8
ITGA4-201ENST00000233573 DCTPP1Q9H773 170 aa20.03■□□□□ 0.8
ITGA4-201ENST00000233573 PLEKHG2Q9H7P9 1386 aa20.02■□□□□ 0.8
ITGA4-201ENST00000233573 PARP4Q9UKK3 1724 aaKnown RBP20.02■□□□□ 0.8
ITGA4-201ENST00000233573 CYP27B1O15528 508 aa20.02■□□□□ 0.8
ITGA4-201ENST00000233573 NECTIN2Q92692 538 aa20.02■□□□□ 0.8
ITGA4-201ENST00000233573 USP35Q9P2H5 1018 aa20.02■□□□□ 0.8
ITGA4-201ENST00000233573 PXDNLA1KZ92 1463 aa20.02■□□□□ 0.8
ITGA4-201ENST00000233573 COL14A1Q05707 1796 aaKnown RBP20.02■□□□□ 0.79
ITGA4-201ENST00000233573 HDGFL1Q5TGJ6 251 aa20.01■□□□□ 0.79
ITGA4-201ENST00000233573 ANKRD45Q5TZF3 282 aa20.01■□□□□ 0.79
ITGA4-201ENST00000233573 SCN11AQ9UI33 1791 aa20.01■□□□□ 0.79
ITGA4-201ENST00000233573 HEG1Q9ULI3 1381 aa20.01■□□□□ 0.79
ITGA4-201ENST00000233573 BTBD11A6QL63 1104 aa20.01■□□□□ 0.79
ITGA4-201ENST00000233573 CARD10Q9BWT7 1032 aa20.01■□□□□ 0.79
ITGA4-201ENST00000233573 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.01■□□□□ 0.79
ITGA4-201ENST00000233573 ADAMTS2O95450 1211 aa19.99■□□□□ 0.79
ITGA4-201ENST00000233573 FKBP5Q13451 457 aaPredicted RBP19.99■□□□□ 0.79
ITGA4-201ENST00000233573 SLC4A10Q6U841 1118 aa19.99■□□□□ 0.79
ITGA4-201ENST00000233573 IFNL2Q8IZJ0 200 aa19.99■□□□□ 0.79
ITGA4-201ENST00000233573 NUTM2BA6NNL0 878 aaPredicted RBP19.97■□□□□ 0.79
ITGA4-201ENST00000233573 NUTM2EB1AL46 878 aaPredicted RBP19.97■□□□□ 0.79
ITGA4-201ENST00000233573 NUTM2AQ8IVF1 878 aaPredicted RBP19.97■□□□□ 0.79
ITGA4-201ENST00000233573 IL2RBP14784 551 aa19.96■□□□□ 0.79
ITGA4-201ENST00000233573 PHAXQ9H814 394 aaKnown RBP19.96■□□□□ 0.79
ITGA4-201ENST00000233573 SHANK3Q9BYB0 1731 aa19.96■□□□□ 0.79
ITGA4-201ENST00000233573 PLCH1Q4KWH8 1693 aa19.96■□□□□ 0.79
ITGA4-201ENST00000233573 BMP2KLQ5H9B9 411 aa19.95■□□□□ 0.78
ITGA4-201ENST00000233573 ZCRB1Q8TBF4 217 aaKnown RBP19.95■□□□□ 0.78
ITGA4-201ENST00000233573 CHMP4AQ9BY43 222 aa19.95■□□□□ 0.78
ITGA4-201ENST00000233573 TBC1D32Q96NH3 1257 aa19.95■□□□□ 0.78
ITGA4-201ENST00000233573 SLC52A2Q9HAB3 445 aa19.95■□□□□ 0.78
ITGA4-201ENST00000233573 GIGYF1O75420 1035 aaPredicted RBP19.94■□□□□ 0.78
ITGA4-201ENST00000233573 EIF2S2P20042 333 aaKnown RBP19.94■□□□□ 0.78
ITGA4-201ENST00000233573 NFATC2IPQ8NCF5 419 aa19.94■□□□□ 0.78
ITGA4-201ENST00000233573 CHPF2Q9P2E5 772 aa19.94■□□□□ 0.78
ITGA4-201ENST00000233573 SLC39A6Q13433 755 aa19.93■□□□□ 0.78
ITGA4-201ENST00000233573 MRC1P22897 1456 aa19.93■□□□□ 0.78
ITGA4-201ENST00000233573 DCAF5Q96JK2 942 aa19.93■□□□□ 0.78
ITGA4-201ENST00000233573 PCDH11XQ9BZA7 1347 aa19.93■□□□□ 0.78
ITGA4-201ENST00000233573 PCDH11YQ9BZA8 1340 aa19.93■□□□□ 0.78
ITGA4-201ENST00000233573 GNAI2P04899 355 aa19.92■□□□□ 0.78
ITGA4-201ENST00000233573 DDX54Q8TDD1 881 aaKnown RBP19.92■□□□□ 0.78
ITGA4-201ENST00000233573 PRAMEF22A3QJZ6 481 aa19.91■□□□□ 0.78
ITGA4-201ENST00000233573 GNAI3P08754 354 aa19.91■□□□□ 0.78
ITGA4-201ENST00000233573 USP44Q9H0E7 712 aa19.91■□□□□ 0.78
ITGA4-201ENST00000233573 PLEKHM2Q8IWE5 1019 aa19.9■□□□□ 0.78
ITGA4-201ENST00000233573 NRAPQ86VF7 1730 aa19.9■□□□□ 0.78
ITGA4-201ENST00000233573 CERKQ8TCT0 537 aa19.9■□□□□ 0.78
ITGA4-201ENST00000233573 UPF2Q9HAU5 1272 aaKnown RBP19.9■□□□□ 0.78
ITGA4-201ENST00000233573 HMMRO75330 724 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms