RNA–Protein interactions for RNA: ENST00000231061.8

SPARC-201, Transcript of secreted protein acidic and cysteine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARC, Length 3,701 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-201ENST00000231061 MAMSTRQ6ZN01 415 aa10.09□□□□□ -0.79
SPARC-201ENST00000231061 CGNL1Q0VF96 1302 aa10.09□□□□□ -0.79
SPARC-201ENST00000231061 CALRP27797 417 aaKnown RBP10.09□□□□□ -0.79
SPARC-201ENST00000231061 SAFB2Q14151 953 aaKnown RBP eCLIP10.09□□□□□ -0.79
SPARC-201ENST00000231061 ARL10Q8N8L6 244 aa10.09□□□□□ -0.79
SPARC-201ENST00000231061 PMM1Q92871 262 aa10.09□□□□□ -0.79
SPARC-201ENST00000231061 WDR70Q9NW82 654 aa10.09□□□□□ -0.79
SPARC-201ENST00000231061 CLASP1Q7Z460 1538 aa10.09□□□□□ -0.79
SPARC-201ENST00000231061 ABCA6Q8N139 1617 aa10.09□□□□□ -0.79
SPARC-201ENST00000231061 IGHDP01880 384 aa10.09□□□□□ -0.79
SPARC-201ENST00000231061 CFAP53Q96M91 514 aa10.09□□□□□ -0.79
SPARC-201ENST00000231061 ARPC5LQ9BPX5 153 aa10.09□□□□□ -0.79
SPARC-201ENST00000231061 MAP3K4Q9Y6R4 1608 aa10.08□□□□□ -0.8
SPARC-201ENST00000231061 C16orf87Q6PH81 154 aa10.08□□□□□ -0.8
SPARC-201ENST00000231061 NUCKS1Q9H1E3 243 aaKnown RBP10.08□□□□□ -0.8
SPARC-201ENST00000231061 MYOM2P54296 1465 aa10.08□□□□□ -0.8
SPARC-201ENST00000231061 IPO7O95373 1038 aaKnown RBP10.08□□□□□ -0.8
SPARC-201ENST00000231061 PPP2R5AQ15172 486 aa10.08□□□□□ -0.8
SPARC-201ENST00000231061 TCP11L2Q8N4U5 519 aa10.08□□□□□ -0.8
SPARC-201ENST00000231061 EFCC1Q9HA90 598 aa10.08□□□□□ -0.8
SPARC-201ENST00000231061 IRAK4Q9NWZ3 460 aa10.08□□□□□ -0.8
SPARC-201ENST00000231061 ARAP3Q8WWN8 1544 aa10.08□□□□□ -0.8
SPARC-201ENST00000231061 WDHD1O75717 1129 aaPredicted RBP10.08□□□□□ -0.8
SPARC-201ENST00000231061 RUNDC1Q96C34 613 aa10.08□□□□□ -0.8
SPARC-201ENST00000231061 LRRC27Q9C0I9 530 aa10.08□□□□□ -0.8
SPARC-201ENST00000231061 DEPDC5O75140 1603 aa10.08□□□□□ -0.8
SPARC-201ENST00000231061 KCNA1Q09470 495 aa10.07□□□□□ -0.8
SPARC-201ENST00000231061 NBPF3Q9H094 633 aa10.07□□□□□ -0.8
SPARC-201ENST00000231061 DIS3Q9Y2L1 958 aaKnown RBP10.07□□□□□ -0.8
SPARC-201ENST00000231061 INO80Q9ULG1 1556 aaPredicted RBP10.07□□□□□ -0.8
SPARC-201ENST00000231061 ABCD1P33897 745 aa10.07□□□□□ -0.8
SPARC-201ENST00000231061 MTHFSP49914 203 aa10.07□□□□□ -0.8
SPARC-201ENST00000231061 ARHGEF10LQ9HCE6 1279 aa10.07□□□□□ -0.8
SPARC-201ENST00000231061 PDE3AQ14432 1141 aa10.07□□□□□ -0.8
SPARC-201ENST00000231061 TPX2Q9ULW0 747 aaKnown RBP10.07□□□□□ -0.8
SPARC-201ENST00000231061 POLR3AO14802 1390 aaPredicted RBP10.06□□□□□ -0.8
SPARC-201ENST00000231061 CARNS1A5YM72 827 aa10.06□□□□□ -0.8
SPARC-201ENST00000231061 ASXL2Q76L83 1435 aa10.06□□□□□ -0.8
SPARC-201ENST00000231061 ERCC3P19447 782 aa10.06□□□□□ -0.8
SPARC-201ENST00000231061 TNPO1Q92973 898 aaKnown RBP10.06□□□□□ -0.8
SPARC-201ENST00000231061 TIGD1Q96MW7 591 aa10.06□□□□□ -0.8
SPARC-201ENST00000231061 EFCAB6Q5THR3 1501 aa10.05□□□□□ -0.8
SPARC-201ENST00000231061 COQ9O75208 318 aa10.05□□□□□ -0.8
SPARC-201ENST00000231061 GOPCQ9HD26 462 aa10.05□□□□□ -0.8
SPARC-201ENST00000231061 DONSONQ9NYP3 566 aa10.05□□□□□ -0.8
SPARC-201ENST00000231061 VWDEQ8N2E2 1590 aa10.05□□□□□ -0.8
SPARC-201ENST00000231061 METTL14Q9HCE5 456 aaKnown RBP10.05□□□□□ -0.8
SPARC-201ENST00000231061 TNNQ9UQP3 1299 aa10.05□□□□□ -0.8
SPARC-201ENST00000231061 KIF16BQ96L93 1317 aa10.05□□□□□ -0.8
SPARC-201ENST00000231061 KIF1BO60333 1816 aa10.05□□□□□ -0.8
SPARC-201ENST00000231061 KIAA1210Q9ULL0 1709 aa10.05□□□□□ -0.8
SPARC-201ENST00000231061 TRAIPQ9BWF2 469 aa10.05□□□□□ -0.8
SPARC-201ENST00000231061 L1TD1Q5T7N2 865 aaKnown RBP10.04□□□□□ -0.8
SPARC-201ENST00000231061 GPATCH3Q96I76 525 aa10.04□□□□□ -0.8
SPARC-201ENST00000231061 C14orf93Q9H972 538 aaKnown RBP10.04□□□□□ -0.8
SPARC-201ENST00000231061 SUFUQ9UMX1 484 aa10.04□□□□□ -0.8
SPARC-201ENST00000231061 ABCA9Q8IUA7 1624 aa10.04□□□□□ -0.8
SPARC-201ENST00000231061 H0YHG0 523 aa10.04□□□□□ -0.8
SPARC-201ENST00000231061 U2SURPO15042 1029 aaKnown RBP10.04□□□□□ -0.8
SPARC-201ENST00000231061 PARNO95453 639 aaKnown RBP10.04□□□□□ -0.8
SPARC-201ENST00000231061 RARSP54136 660 aaKnown RBP10.04□□□□□ -0.8
SPARC-201ENST00000231061 SARNPP82979 210 aaKnown RBP10.04□□□□□ -0.8
SPARC-201ENST00000231061 CABP2Q9NPB3 220 aa10.04□□□□□ -0.8
SPARC-201ENST00000231061 MAPK8IP3Q9UPT6 1336 aa10.04□□□□□ -0.8
SPARC-201ENST00000231061 OSCARQ8IYS5 282 aa10.04□□□□□ -0.8
SPARC-201ENST00000231061 PHC3Q8NDX5 983 aa10.04□□□□□ -0.8
SPARC-201ENST00000231061 UHMK1Q8TAS1 419 aaKnown RBP10.04□□□□□ -0.8
SPARC-201ENST00000231061 MORC4Q8TE76 937 aa10.04□□□□□ -0.8
SPARC-201ENST00000231061 MROH1Q8NDA8 1641 aa10.03□□□□□ -0.8
SPARC-201ENST00000231061 SKILP12757 684 aa10.03□□□□□ -0.8
SPARC-201ENST00000231061 ABL2P42684 1182 aa10.03□□□□□ -0.8
SPARC-201ENST00000231061 FEZ2Q9UHY8 353 aaPredicted RBP10.03□□□□□ -0.8
SPARC-201ENST00000231061 SBNO2Q9Y2G9 1366 aa10.03□□□□□ -0.8
SPARC-201ENST00000231061 NINLQ9Y2I6 1382 aa10.03□□□□□ -0.8
SPARC-201ENST00000231061 EVC2Q86UK5 1308 aa10.03□□□□□ -0.8
SPARC-201ENST00000231061 BDNFP23560 247 aa10.03□□□□□ -0.8
SPARC-201ENST00000231061 ZNF232Q9UNY5 417 aa10.03□□□□□ -0.8
SPARC-201ENST00000231061 PDZRN3Q9UPQ7 1066 aa10.03□□□□□ -0.8
SPARC-201ENST00000231061 DDX49Q9Y6V7 483 aaKnown RBP10.03□□□□□ -0.8
SPARC-201ENST00000231061 MROH2AA6NES4 1674 aa10.03□□□□□ -0.8
SPARC-201ENST00000231061 PPRC1Q5VV67 1664 aaKnown RBP10.03□□□□□ -0.8
SPARC-201ENST00000231061 CFAP65Q6ZU64 1925 aaKnown RBP10.03□□□□□ -0.8
SPARC-201ENST00000231061 SRPK2P78362 688 aaKnown RBP10.03□□□□□ -0.8
SPARC-201ENST00000231061 CCDC70Q6NSX1 233 aa10.03□□□□□ -0.8
SPARC-201ENST00000231061 PMFBP1Q8TBY8 1022 aa10.03□□□□□ -0.8
SPARC-201ENST00000231061 FAM210AQ96ND0 272 aa10.03□□□□□ -0.8
SPARC-201ENST00000231061 CLEC4GQ6UXB4 293 aa10.02□□□□□ -0.81
SPARC-201ENST00000231061 FMNL2Q96PY5 1086 aa10.02□□□□□ -0.81
SPARC-201ENST00000231061 C22orf23Q9BZE7 217 aa10.02□□□□□ -0.81
SPARC-201ENST00000231061 CXorf56Q9H5V9 222 aa10.02□□□□□ -0.81
SPARC-201ENST00000231061 PICK1Q9NRD5 415 aa10.02□□□□□ -0.81
SPARC-201ENST00000231061 ZNF518AQ6AHZ1 1483 aa10.02□□□□□ -0.81
SPARC-201ENST00000231061 FRAT2O75474 233 aaPredicted RBP10.02□□□□□ -0.81
SPARC-201ENST00000231061 RLBP1P12271 317 aa10.02□□□□□ -0.81
SPARC-201ENST00000231061 UVSSAQ2YD98 709 aa10.02□□□□□ -0.81
SPARC-201ENST00000231061 UPF2Q9HAU5 1272 aaKnown RBP10.02□□□□□ -0.81
SPARC-201ENST00000231061 RABL2BQ9UNT1 228 aa10.02□□□□□ -0.81
SPARC-201ENST00000231061 NPATQ14207 1427 aa10.02□□□□□ -0.81
SPARC-201ENST00000231061 KLF15Q9UIH9 416 aa10.02□□□□□ -0.81
SPARC-201ENST00000231061 TSPYL1Q9H0U9 437 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms