RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 KIF1BPQ96EK5 621 aa13.51□□□□□ -0.25
LAMA4-201ENST00000230538 ABCF2Q9UG63 623 aa13.51□□□□□ -0.25
LAMA4-201ENST00000230538 RAB11FIP3O75154 756 aa13.5□□□□□ -0.25
LAMA4-201ENST00000230538 STARD3NLO95772 234 aa13.5□□□□□ -0.25
LAMA4-201ENST00000230538 ARHGAP29Q52LW3 1261 aa13.5□□□□□ -0.25
LAMA4-201ENST00000230538 ANKLE2Q86XL3 938 aa13.5□□□□□ -0.25
LAMA4-201ENST00000230538 CCDC83Q8IWF9 413 aa13.5□□□□□ -0.25
LAMA4-201ENST00000230538 AKAP2Q9Y2D5 859 aa13.5□□□□□ -0.25
LAMA4-201ENST00000230538 XPCQ01831 940 aaPredicted RBP13.5□□□□□ -0.25
LAMA4-201ENST00000230538 C20orf194Q5TEA3 1177 aa13.5□□□□□ -0.25
LAMA4-201ENST00000230538 SLC26A8Q96RN1 970 aa13.5□□□□□ -0.25
LAMA4-201ENST00000230538 THUMPD2Q9BTF0 503 aaKnown RBP13.5□□□□□ -0.25
LAMA4-201ENST00000230538 SEC63Q9UGP8 760 aaKnown RBP13.5□□□□□ -0.25
LAMA4-201ENST00000230538 U3KPZ7 1027 aaPredicted RBP13.5□□□□□ -0.25
LAMA4-201ENST00000230538 MCM10Q7L590 875 aa13.5□□□□□ -0.25
LAMA4-201ENST00000230538 MX1P20591 662 aa13.49□□□□□ -0.25
LAMA4-201ENST00000230538 TROQ12816 1431 aaPredicted RBP13.49□□□□□ -0.25
LAMA4-201ENST00000230538 DUSP27Q5VZP5 1158 aa13.49□□□□□ -0.25
LAMA4-201ENST00000230538 PRPF40BQ6NWY9 871 aaKnown RBP13.49□□□□□ -0.25
LAMA4-201ENST00000230538 ZNF287Q9HBT7 754 aa13.49□□□□□ -0.25
LAMA4-201ENST00000230538 PPP1R12BO60237 982 aaPredicted RBP13.48□□□□□ -0.25
LAMA4-201ENST00000230538 PCF11O94913 1555 aaKnown RBP13.48□□□□□ -0.25
LAMA4-201ENST00000230538 POTEJP0CG39 1038 aa13.48□□□□□ -0.25
LAMA4-201ENST00000230538 DHX37Q8IY37 1157 aaKnown RBP13.48□□□□□ -0.25
LAMA4-201ENST00000230538 GLRX3O76003 335 aaKnown RBP13.48□□□□□ -0.25
LAMA4-201ENST00000230538 TMOD2Q9NZR1 351 aa13.48□□□□□ -0.25
LAMA4-201ENST00000230538 NCAPD3P42695 1498 aa13.48□□□□□ -0.25
LAMA4-201ENST00000230538 SNAPC4Q5SXM2 1469 aa13.48□□□□□ -0.25
LAMA4-201ENST00000230538 NESP48681 1621 aa13.48□□□□□ -0.25
LAMA4-201ENST00000230538 PTPN23Q9H3S7 1636 aa13.48□□□□□ -0.25
LAMA4-201ENST00000230538 NKTRP30414 1462 aaKnown RBP13.48□□□□□ -0.25
LAMA4-201ENST00000230538 POLR3DP05423 398 aaPredicted RBP13.47□□□□□ -0.25
LAMA4-201ENST00000230538 ZC3H6P61129 1189 aaKnown RBP13.47□□□□□ -0.25
LAMA4-201ENST00000230538 TNIP1Q15025 636 aa13.47□□□□□ -0.25
LAMA4-201ENST00000230538 CAVIN4Q5BKX8 364 aa13.47□□□□□ -0.25
LAMA4-201ENST00000230538 NUDT16Q96DE0 195 aaKnown RBP13.47□□□□□ -0.25
LAMA4-201ENST00000230538 MINDY4BA8MYZ0 360 aa13.47□□□□□ -0.25
LAMA4-201ENST00000230538 SPA17Q15506 151 aa13.47□□□□□ -0.25
LAMA4-201ENST00000230538 FERMT3Q86UX7 667 aa13.47□□□□□ -0.25
LAMA4-201ENST00000230538 ESPNB1AK53 854 aa13.47□□□□□ -0.25
LAMA4-201ENST00000230538 MYD88Q99836 296 aa13.47□□□□□ -0.25
LAMA4-201ENST00000230538 TRIM21P19474 475 aaKnown RBP13.47□□□□□ -0.25
LAMA4-201ENST00000230538 KCNH5Q8NCM2 988 aa13.47□□□□□ -0.25
LAMA4-201ENST00000230538 TSG101Q99816 390 aa13.47□□□□□ -0.25
LAMA4-201ENST00000230538 ZNF652Q9Y2D9 606 aa13.47□□□□□ -0.25
LAMA4-201ENST00000230538 TAF3Q5VWG9 929 aa13.46□□□□□ -0.25
LAMA4-201ENST00000230538 UBXN4Q92575 508 aa13.46□□□□□ -0.25
LAMA4-201ENST00000230538 PKNOX2Q96KN3 472 aa13.46□□□□□ -0.25
LAMA4-201ENST00000230538 MRC2Q9UBG0 1479 aa13.46□□□□□ -0.25
LAMA4-201ENST00000230538 BOLA2Q9H3K6 86 aa13.46□□□□□ -0.25
LAMA4-201ENST00000230538 MKNK2Q9HBH9 465 aa13.46□□□□□ -0.25
LAMA4-201ENST00000230538 LARP1Q6PKG0 1096 aaKnown RBP13.46□□□□□ -0.25
LAMA4-201ENST00000230538 IFIT1P09914 478 aaKnown RBP13.46□□□□□ -0.26
LAMA4-201ENST00000230538 FKBP15Q5T1M5 1219 aa13.46□□□□□ -0.26
LAMA4-201ENST00000230538 ERICH4A6NGS2 130 aa13.46□□□□□ -0.26
LAMA4-201ENST00000230538 ANO10Q9NW15 660 aa13.46□□□□□ -0.26
LAMA4-201ENST00000230538 CASQ1P31415 396 aa13.45□□□□□ -0.26
LAMA4-201ENST00000230538 CCDC183Q5T5S1 534 aa13.45□□□□□ -0.26
LAMA4-201ENST00000230538 CRACR2BQ8N4Y2 399 aaPredicted RBP13.45□□□□□ -0.26
LAMA4-201ENST00000230538 PIP4K2BP78356 416 aa13.45□□□□□ -0.26
LAMA4-201ENST00000230538 NAPBQ9H115 298 aa13.45□□□□□ -0.26
LAMA4-201ENST00000230538 ZSCAN12O43309 604 aa13.45□□□□□ -0.26
LAMA4-201ENST00000230538 IBSPP21815 317 aaPredicted RBP13.45□□□□□ -0.26
LAMA4-201ENST00000230538 SFPQP23246 707 aaKnown RBP eCLIP13.45□□□□□ -0.26
LAMA4-201ENST00000230538 CETN2P41208 172 aa13.45□□□□□ -0.26
LAMA4-201ENST00000230538 RARSP54136 660 aaKnown RBP13.45□□□□□ -0.26
LAMA4-201ENST00000230538 KLHL10Q6JEL2 608 aa13.45□□□□□ -0.26
LAMA4-201ENST00000230538 TMOD3Q9NYL9 352 aa13.45□□□□□ -0.26
LAMA4-201ENST00000230538 CCDC196A0A1B0GTZ2 297 aa13.44□□□□□ -0.26
LAMA4-201ENST00000230538 GBP3Q9H0R5 595 aa13.44□□□□□ -0.26
LAMA4-201ENST00000230538 PRXQ9BXM0 1461 aa13.44□□□□□ -0.26
LAMA4-201ENST00000230538 C8orf76Q96K31 380 aa13.44□□□□□ -0.26
LAMA4-201ENST00000230538 PTPN14Q15678 1187 aa13.44□□□□□ -0.26
LAMA4-201ENST00000230538 ALDH1L2Q3SY69 923 aa13.44□□□□□ -0.26
LAMA4-201ENST00000230538 CRACR2AQ9BSW2 395 aa13.44□□□□□ -0.26
LAMA4-201ENST00000230538 PHAXQ9H814 394 aaKnown RBP13.44□□□□□ -0.26
LAMA4-201ENST00000230538 SH2B1Q9NRF2 756 aaPredicted RBP13.44□□□□□ -0.26
LAMA4-201ENST00000230538 POLA1P09884 1462 aaPredicted RBP13.43□□□□□ -0.26
LAMA4-201ENST00000230538 KIF2AO00139 706 aaPredicted RBP13.43□□□□□ -0.26
LAMA4-201ENST00000230538 PTCD1O75127 700 aaKnown RBP13.43□□□□□ -0.26
LAMA4-201ENST00000230538 CACNA2D4Q7Z3S7 1137 aa13.43□□□□□ -0.26
LAMA4-201ENST00000230538 KIF5CO60282 957 aa13.43□□□□□ -0.26
LAMA4-201ENST00000230538 TMCO3Q6UWJ1 677 aa13.43□□□□□ -0.26
LAMA4-201ENST00000230538 DZIP1Q86YF9 867 aaKnown RBP13.43□□□□□ -0.26
LAMA4-201ENST00000230538 PDCL2Q8N4E4 241 aa13.43□□□□□ -0.26
LAMA4-201ENST00000230538 SSH1Q8WYL5 1049 aa13.43□□□□□ -0.26
LAMA4-201ENST00000230538 SCAND2PQ9GZW5 306 aaPredicted RBP13.43□□□□□ -0.26
LAMA4-201ENST00000230538 PLEKHH1Q9ULM0 1364 aa13.43□□□□□ -0.26
LAMA4-201ENST00000230538 IFT140Q96RY7 1462 aa13.43□□□□□ -0.26
LAMA4-201ENST00000230538 ZPR1O75312 459 aa13.43□□□□□ -0.26
LAMA4-201ENST00000230538 HMGB1P09429 215 aaKnown RBP13.43□□□□□ -0.26
LAMA4-201ENST00000230538 SSFA2P28290 1259 aa13.43□□□□□ -0.26
LAMA4-201ENST00000230538 USHBP1Q8N6Y0 703 aa13.43□□□□□ -0.26
LAMA4-201ENST00000230538 CAMSAP2Q08AD1 1489 aa13.43□□□□□ -0.26
LAMA4-201ENST00000230538 CCDC61Q9Y6R9 512 aa13.43□□□□□ -0.26
LAMA4-201ENST00000230538 POGZQ7Z3K3 1410 aa13.43□□□□□ -0.26
LAMA4-201ENST00000230538 DNAI2Q9GZS0 605 aa13.43□□□□□ -0.26
LAMA4-201ENST00000230538 ANKIB1Q9P2G1 1089 aa13.43□□□□□ -0.26
LAMA4-201ENST00000230538 FAM135AQ9P2D6 1515 aa13.43□□□□□ -0.26
LAMA4-201ENST00000230538 RAPGEF3O95398 923 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms