RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 PHF14O94880 888 aa19.19■□□□□ 0.66
GPN3-201ENST00000228827 HMGB2P26583 209 aaKnown RBP19.19■□□□□ 0.66
GPN3-201ENST00000228827 ITPK1Q13572 414 aa19.19■□□□□ 0.66
GPN3-201ENST00000228827 MSL1Q68DK7 614 aa19.19■□□□□ 0.66
GPN3-201ENST00000228827 RBM42Q9BTD8 480 aaKnown RBP19.19■□□□□ 0.66
GPN3-201ENST00000228827 DCAF8L1A6NGE4 600 aa19.18■□□□□ 0.66
GPN3-201ENST00000228827 AMIGO3Q86WK7 504 aa19.18■□□□□ 0.66
GPN3-201ENST00000228827 QSER1Q2KHR3 1735 aa19.18■□□□□ 0.66
GPN3-201ENST00000228827 COL3A1P02461 1466 aaPredicted RBP19.17■□□□□ 0.66
GPN3-201ENST00000228827 AKAP4Q5JQC9 854 aa19.17■□□□□ 0.66
GPN3-201ENST00000228827 C4BP0C0L5 1744 aa19.17■□□□□ 0.66
GPN3-201ENST00000228827 NFATC2IPQ8NCF5 419 aa19.16■□□□□ 0.66
GPN3-201ENST00000228827 FLAD1Q8NFF5 587 aa19.16■□□□□ 0.66
GPN3-201ENST00000228827 MTHFSDQ2M296 383 aaKnown RBP19.16■□□□□ 0.66
GPN3-201ENST00000228827 SLC4A9Q96Q91 983 aa19.16■□□□□ 0.66
GPN3-201ENST00000228827 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.15■□□□□ 0.66
GPN3-201ENST00000228827 GNPATO15228 680 aa19.15■□□□□ 0.66
GPN3-201ENST00000228827 LGR6Q9HBX8 967 aa19.15■□□□□ 0.66
GPN3-201ENST00000228827 PTCD1O75127 700 aaKnown RBP19.14■□□□□ 0.65
GPN3-201ENST00000228827 CFAP53Q96M91 514 aa19.14■□□□□ 0.65
GPN3-201ENST00000228827 PPP2R1AP30153 589 aa19.13■□□□□ 0.65
GPN3-201ENST00000228827 TAF1LQ8IZX4 1826 aa19.13■□□□□ 0.65
GPN3-201ENST00000228827 SSFA2P28290 1259 aa19.12■□□□□ 0.65
GPN3-201ENST00000228827 RNMTO43148 476 aaKnown RBP19.11■□□□□ 0.65
GPN3-201ENST00000228827 SLC52A2Q9HAB3 445 aa19.11■□□□□ 0.65
GPN3-201ENST00000228827 MAP3K5Q99683 1374 aa19.11■□□□□ 0.65
GPN3-201ENST00000228827 NLGN2Q8NFZ4 835 aa19.09■□□□□ 0.65
GPN3-201ENST00000228827 NUDCQ9Y266 331 aa19.08■□□□□ 0.64
GPN3-201ENST00000228827 RTCBQ9Y3I0 505 aaKnown RBP19.08■□□□□ 0.64
GPN3-201ENST00000228827 YY1P25490 414 aa19.07■□□□□ 0.64
GPN3-201ENST00000228827 PRKAR2BP31323 418 aa19.07■□□□□ 0.64
GPN3-201ENST00000228827 SLC39A6Q13433 755 aa19.07■□□□□ 0.64
GPN3-201ENST00000228827 PELP1Q8IZL8 1130 aaKnown RBP19.07■□□□□ 0.64
GPN3-201ENST00000228827 COL24A1Q17RW2 1714 aa19.07■□□□□ 0.64
GPN3-201ENST00000228827 U2AF1L5P0DN76 240 aaPredicted RBP19.06■□□□□ 0.64
GPN3-201ENST00000228827 U2AF1Q01081 240 aaKnown RBP eCLIP19.06■□□□□ 0.64
GPN3-201ENST00000228827 TRAPPC3LQ5T215 181 aa19.06■□□□□ 0.64
GPN3-201ENST00000228827 GAS2L2Q8NHY3 880 aa19.06■□□□□ 0.64
GPN3-201ENST00000228827 RSPH6AQ9H0K4 717 aa19.06■□□□□ 0.64
GPN3-201ENST00000228827 UBR3Q6ZT12 1888 aa19.06■□□□□ 0.64
GPN3-201ENST00000228827 CNTNAP4Q9C0A0 1308 aa19.06■□□□□ 0.64
GPN3-201ENST00000228827 RC3H1Q5TC82 1133 aaKnown RBP19.05■□□□□ 0.64
GPN3-201ENST00000228827 PHACTR3Q96KR7 559 aa19.05■□□□□ 0.64
GPN3-201ENST00000228827 CRKLP46109 303 aaKnown RBP19.04■□□□□ 0.64
GPN3-201ENST00000228827 GPR162Q16538 588 aa19.04■□□□□ 0.64
GPN3-201ENST00000228827 MRC1P22897 1456 aa19.04■□□□□ 0.64
GPN3-201ENST00000228827 SCN11AQ9UI33 1791 aa19.04■□□□□ 0.64
GPN3-201ENST00000228827 GNAT3A8MTJ3 354 aa19.03■□□□□ 0.64
GPN3-201ENST00000228827 RPS6KA4O75676 772 aa19.03■□□□□ 0.64
GPN3-201ENST00000228827 ARHGEF1Q92888 912 aaKnown RBP19.03■□□□□ 0.64
GPN3-201ENST00000228827 DNAJC10Q8IXB1 793 aa19.03■□□□□ 0.64
GPN3-201ENST00000228827 IL17REQ8NFR9 667 aa19.03■□□□□ 0.64
GPN3-201ENST00000228827 ZNF831Q5JPB2 1677 aa19.01■□□□□ 0.63
GPN3-201ENST00000228827 RFC4P35249 363 aa19.01■□□□□ 0.63
GPN3-201ENST00000228827 TEFQ10587 303 aa19.01■□□□□ 0.63
GPN3-201ENST00000228827 ADRA2BP18089 450 aa19■□□□□ 0.63
GPN3-201ENST00000228827 DDX10Q13206 875 aaKnown RBP19■□□□□ 0.63
GPN3-201ENST00000228827 CD2APQ9Y5K6 639 aa19■□□□□ 0.63
GPN3-201ENST00000228827 COL5A3P25940 1745 aaPredicted RBP18.99■□□□□ 0.63
GPN3-201ENST00000228827 MMP10P09238 476 aa18.99■□□□□ 0.63
GPN3-201ENST00000228827 TTC5Q8N0Z6 440 aa18.99■□□□□ 0.63
GPN3-201ENST00000228827 ADAMTS7Q9UKP4 1686 aa18.98■□□□□ 0.63
GPN3-201ENST00000228827 FCHSD2O94868 740 aa18.98■□□□□ 0.63
GPN3-201ENST00000228827 INTS5Q6P9B9 1019 aaKnown RBP18.98■□□□□ 0.63
GPN3-201ENST00000228827 KCPQ6ZWJ8 1503 aa18.98■□□□□ 0.63
GPN3-201ENST00000228827 TJP1Q07157 1748 aa18.98■□□□□ 0.63
GPN3-201ENST00000228827 CCDC87Q9NVE4 849 aa18.97■□□□□ 0.63
GPN3-201ENST00000228827 SRP68Q9UHB9 627 aaKnown RBP18.97■□□□□ 0.63
GPN3-201ENST00000228827 CYP19A1P11511 503 aaPredicted RBP18.97■□□□□ 0.63
GPN3-201ENST00000228827 GYS1P13807 737 aa18.97■□□□□ 0.63
GPN3-201ENST00000228827 NLGN1Q8N2Q7 840 aa18.97■□□□□ 0.63
GPN3-201ENST00000228827 YBX3P16989 372 aaKnown RBP eCLIP18.96■□□□□ 0.633e-7■■■■□ 24.6
GPN3-201ENST00000228827 WWC3Q9ULE0 1092 aa18.96■□□□□ 0.63
GPN3-201ENST00000228827 ZNF790Q6PG37 636 aa18.95■□□□□ 0.62
GPN3-201ENST00000228827 MCM10Q7L590 875 aa18.95■□□□□ 0.62
GPN3-201ENST00000228827 RTF1Q92541 710 aaKnown RBP18.95■□□□□ 0.62
GPN3-201ENST00000228827 CEMIPQ8WUJ3 1361 aa18.94■□□□□ 0.62
GPN3-201ENST00000228827 VSIG10Q8N0Z9 540 aa18.94■□□□□ 0.62
GPN3-201ENST00000228827 ZNF496Q96IT1 587 aaPredicted RBP18.94■□□□□ 0.62
GPN3-201ENST00000228827 ZBTB1Q9Y2K1 713 aa18.94■□□□□ 0.62
GPN3-201ENST00000228827 SOS1Q07889 1333 aaPredicted RBP18.93■□□□□ 0.62
GPN3-201ENST00000228827 BTBD11A6QL63 1104 aa18.93■□□□□ 0.62
GPN3-201ENST00000228827 DCTN1Q14203 1278 aa18.93■□□□□ 0.62
GPN3-201ENST00000228827 CICQ96RK0 1608 aaPredicted RBP18.93■□□□□ 0.62
GPN3-201ENST00000228827 USP42Q9H9J4 1324 aaKnown RBP18.92■□□□□ 0.62
GPN3-201ENST00000228827 KCNQ3O43525 872 aa18.92■□□□□ 0.62
GPN3-201ENST00000228827 CANXP27824 592 aaKnown RBP18.92■□□□□ 0.62
GPN3-201ENST00000228827 FKBP8Q14318 412 aa18.92■□□□□ 0.62
GPN3-201ENST00000228827 RALBP1Q15311 655 aa18.92■□□□□ 0.62
GPN3-201ENST00000228827 PARP3Q9Y6F1 533 aa18.92■□□□□ 0.62
GPN3-201ENST00000228827 MYH14Q7Z406 1995 aaKnown RBP18.91■□□□□ 0.62
GPN3-201ENST00000228827 HEG1Q9ULI3 1381 aa18.91■□□□□ 0.62
GPN3-201ENST00000228827 UTRNP46939 3433 aa18.91■□□□□ 0.62
GPN3-201ENST00000228827 ZPR1O75312 459 aa18.9■□□□□ 0.62
GPN3-201ENST00000228827 STARD3NLO95772 234 aa18.9■□□□□ 0.62
GPN3-201ENST00000228827 NEFMP07197 916 aa18.9■□□□□ 0.62
GPN3-201ENST00000228827 USPL1Q5W0Q7 1092 aa18.9■□□□□ 0.62
GPN3-201ENST00000228827 FMNL2Q96PY5 1086 aa18.9■□□□□ 0.62
GPN3-201ENST00000228827 VIRMAQ69YN4 1812 aaKnown RBP18.9■□□□□ 0.62
GPN3-201ENST00000228827 GRIN3BO60391 1043 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms