RNA–Protein interactions for RNA: ENST00000226218.8

VTN-201, Transcript of vitronectin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTN, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-201ENST00000226218 TMEM87AQ8NBN3 555 aa18.78■□□□□ 0.6
VTN-201ENST00000226218 COG3Q96JB2 828 aa18.78■□□□□ 0.6
VTN-201ENST00000226218 XRN1Q8IZH2 1706 aaKnown RBP18.78■□□□□ 0.6
VTN-201ENST00000226218 WASLO00401 505 aaPredicted RBP18.77■□□□□ 0.6
VTN-201ENST00000226218 GADD45BO75293 160 aaPredicted RBP18.77■□□□□ 0.6
VTN-201ENST00000226218 MYRIPQ8NFW9 859 aa18.77■□□□□ 0.6
VTN-201ENST00000226218 PEAK1Q9H792 1746 aa18.77■□□□□ 0.6
VTN-201ENST00000226218 NALCNQ8IZF0 1738 aa18.77■□□□□ 0.6
VTN-201ENST00000226218 MCCP23508 829 aa18.76■□□□□ 0.59
VTN-201ENST00000226218 CHMLP26374 656 aa18.76■□□□□ 0.59
VTN-201ENST00000226218 FAM184AQ8NB25 1140 aa18.76■□□□□ 0.59
VTN-201ENST00000226218 RPAP1Q9BWH6 1393 aaPredicted RBP18.76■□□□□ 0.59
VTN-201ENST00000226218 A2ML1A8K2U0 1454 aa18.76■□□□□ 0.59
VTN-201ENST00000226218 PLEKHG5O94827 1062 aa18.76■□□□□ 0.59
VTN-201ENST00000226218 PHF14O94880 888 aa18.76■□□□□ 0.59
VTN-201ENST00000226218 EIF4A2Q14240 407 aaKnown RBP18.76■□□□□ 0.59
VTN-201ENST00000226218 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.76■□□□□ 0.59
VTN-201ENST00000226218 PIBF1Q8WXW3 757 aa18.76■□□□□ 0.59
VTN-201ENST00000226218 FAM208AQ9UK61 1670 aaKnown RBP18.75■□□□□ 0.59
VTN-201ENST00000226218 FBXO31Q5XUX0 539 aaPredicted RBP18.75■□□□□ 0.59
VTN-201ENST00000226218 MCM10Q7L590 875 aa18.75■□□□□ 0.59
VTN-201ENST00000226218 SPATA31D1Q6ZQQ2 1576 aa18.75■□□□□ 0.59
VTN-201ENST00000226218 EPB41L2O43491 1005 aaKnown RBP18.74■□□□□ 0.59
VTN-201ENST00000226218 SLC4A2P04920 1241 aa18.74■□□□□ 0.59
VTN-201ENST00000226218 GTF2F1P35269 517 aaKnown RBP eCLIP18.74■□□□□ 0.59
VTN-201ENST00000226218 CCT4P50991 539 aaKnown RBP18.74■□□□□ 0.59
VTN-201ENST00000226218 USP48Q86UV5 1035 aa18.74■□□□□ 0.59
VTN-201ENST00000226218 ARHGEF10O15013 1369 aa18.74■□□□□ 0.59
VTN-201ENST00000226218 NPM1P06748 294 aaKnown RBP eCLIP18.74■□□□□ 0.59
VTN-201ENST00000226218 TSHZ3Q63HK5 1081 aa18.74■□□□□ 0.59
VTN-201ENST00000226218 G2E3Q7L622 706 aa18.74■□□□□ 0.59
VTN-201ENST00000226218 STAP2Q9UGK3 403 aa18.74■□□□□ 0.59
VTN-201ENST00000226218 PTMAP06454 111 aaKnown RBP18.73■□□□□ 0.59
VTN-201ENST00000226218 MX1P20591 662 aa18.73■□□□□ 0.59
VTN-201ENST00000226218 SULT6B1Q6IMI4 303 aa18.73■□□□□ 0.59
VTN-201ENST00000226218 WDR33Q9C0J8 1336 aaKnown RBP18.73■□□□□ 0.59
VTN-201ENST00000226218 PRIMPOLQ96LW4 560 aa18.73■□□□□ 0.59
VTN-201ENST00000226218 EXOC6BQ9Y2D4 811 aa18.73■□□□□ 0.59
VTN-201ENST00000226218 NUDT16Q96DE0 195 aaKnown RBP18.72■□□□□ 0.59
VTN-201ENST00000226218 CCDC94Q9BW85 323 aaPredicted RBP18.72■□□□□ 0.59
VTN-201ENST00000226218 GDPD2Q9HCC8 539 aa18.72■□□□□ 0.59
VTN-201ENST00000226218 GNAI2P04899 355 aa18.71■□□□□ 0.59
VTN-201ENST00000226218 LRRCC1Q9C099 1032 aa18.71■□□□□ 0.59
VTN-201ENST00000226218 CACNA1FO60840 1977 aa18.71■□□□□ 0.59
VTN-201ENST00000226218 F6X3S4 739 aa18.71■□□□□ 0.59
VTN-201ENST00000226218 HMGN5P82970 282 aaKnown RBP18.71■□□□□ 0.59
VTN-201ENST00000226218 ANO2Q9NQ90 1003 aa18.71■□□□□ 0.59
VTN-201ENST00000226218 SPTLC3Q9NUV7 552 aa18.71■□□□□ 0.59
VTN-201ENST00000226218 OVOS2A0A0J9YW53 1432 aa18.7■□□□□ 0.58
VTN-201ENST00000226218 OVOS2Q6IE36 1432 aa18.7■□□□□ 0.58
VTN-201ENST00000226218 CCDC183Q5T5S1 534 aa18.7■□□□□ 0.58
VTN-201ENST00000226218 ZNF710Q8N1W2 664 aa18.7■□□□□ 0.58
VTN-201ENST00000226218 FMN2Q9NZ56 1722 aa18.7■□□□□ 0.58
VTN-201ENST00000226218 LRRC37A3O60309 1634 aa18.7■□□□□ 0.58
VTN-201ENST00000226218 NOLC1Q14978 699 aaKnown RBP eCLIP18.7■□□□□ 0.584e-11■□□□□ 9.3
VTN-201ENST00000226218 NOL8Q76FK4 1167 aaKnown RBP18.7■□□□□ 0.58
VTN-201ENST00000226218 SRCIN1Q9C0H9 1055 aa18.7■□□□□ 0.58
VTN-201ENST00000226218 AOX1Q06278 1338 aa18.69■□□□□ 0.58
VTN-201ENST00000226218 NCKAP5LQ9HCH0 1330 aa18.69■□□□□ 0.58
VTN-201ENST00000226218 RIMS1Q86UR5 1692 aaKnown RBP18.69■□□□□ 0.58
VTN-201ENST00000226218 HSPA4P34932 840 aa18.69■□□□□ 0.58
VTN-201ENST00000226218 UNC5CLQ8IV45 518 aa18.69■□□□□ 0.58
VTN-201ENST00000226218 KLHL34Q8N239 644 aa18.69■□□□□ 0.58
VTN-201ENST00000226218 IL25Q9H293 177 aa18.69■□□□□ 0.58
VTN-201ENST00000226218 USP25Q9UHP3 1055 aa18.69■□□□□ 0.58
VTN-201ENST00000226218 CCDC61Q9Y6R9 512 aa18.69■□□□□ 0.58
VTN-201ENST00000226218 TOPAZ1Q8N9V7 1692 aa18.69■□□□□ 0.58
VTN-201ENST00000226218 CRYBG1Q9Y4K1 1723 aa18.69■□□□□ 0.58
VTN-201ENST00000226218 TECPR2O15040 1411 aa18.69■□□□□ 0.58
VTN-201ENST00000226218 UPF3BQ9BZI7 483 aaKnown RBP18.68■□□□□ 0.58
VTN-201ENST00000226218 PNMA6EA0A0J9YXQ4 647 aa18.68■□□□□ 0.58
VTN-201ENST00000226218 ADCY5O95622 1261 aa18.68■□□□□ 0.58
VTN-201ENST00000226218 ATP8B2P98198 1209 aa18.68■□□□□ 0.58
VTN-201ENST00000226218 FKBP5Q13451 457 aaPredicted RBP18.68■□□□□ 0.58
VTN-201ENST00000226218 SLC4A10Q6U841 1118 aa18.67■□□□□ 0.58
VTN-201ENST00000226218 ZNF830Q96NB3 372 aaPredicted RBP18.67■□□□□ 0.58
VTN-201ENST00000226218 FUCA2Q9BTY2 467 aa18.67■□□□□ 0.58
VTN-201ENST00000226218 JARID2Q92833 1246 aaPredicted RBP18.67■□□□□ 0.58
VTN-201ENST00000226218 TTC14Q96N46 770 aa18.67■□□□□ 0.58
VTN-201ENST00000226218 PRR36Q9H6K5 1346 aa18.66■□□□□ 0.58
VTN-201ENST00000226218 LETM1O95202 739 aaPredicted RBP18.66■□□□□ 0.58
VTN-201ENST00000226218 RILPL2Q969X0 211 aa18.66■□□□□ 0.58
VTN-201ENST00000226218 METP08581 1390 aa18.65■□□□□ 0.58
VTN-201ENST00000226218 FOXD4L6Q3SYB3 417 aaPredicted RBP18.65■□□□□ 0.58
VTN-201ENST00000226218 FOXD4L3Q6VB84 417 aaPredicted RBP18.65■□□□□ 0.58
VTN-201ENST00000226218 TTC12Q9H892 705 aaPredicted RBP18.65■□□□□ 0.58
VTN-201ENST00000226218 TRIM6-TRIM34B2RNG4 842 aa18.65■□□□□ 0.58
VTN-201ENST00000226218 CNPY2Q9Y2B0 182 aa18.65■□□□□ 0.58
VTN-201ENST00000226218 PXDNLA1KZ92 1463 aa18.65■□□□□ 0.58
VTN-201ENST00000226218 GNAI3P08754 354 aa18.64■□□□□ 0.57
VTN-201ENST00000226218 ZSCAN22P10073 491 aaPredicted RBP18.64■□□□□ 0.57
VTN-201ENST00000226218 UBE2HP62256 183 aa18.64■□□□□ 0.57
VTN-201ENST00000226218 UTP14CQ5TAP6 766 aaKnown RBP18.64■□□□□ 0.57
VTN-201ENST00000226218 SIRT1Q96EB6 747 aa18.64■□□□□ 0.57
VTN-201ENST00000226218 MIS18AQ9NYP9 233 aa18.64■□□□□ 0.57
VTN-201ENST00000226218 STAG3Q9UJ98 1225 aa18.64■□□□□ 0.57
VTN-201ENST00000226218 RAD50Q92878 1312 aa18.64■□□□□ 0.57
VTN-201ENST00000226218 KDM4AO75164 1064 aa18.64■□□□□ 0.57
VTN-201ENST00000226218 HCLS1P14317 486 aaPredicted RBP18.64■□□□□ 0.57
VTN-201ENST00000226218 USP31Q70CQ4 1352 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms