RNA–Protein interactions for RNA: ENST00000219476.7

TSC2-201, Transcript of TSC complex subunit 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene TSC2, Length 6,156 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-201ENST00000219476 PPP1R14CQ8TAE6 165 aa19.27■□□□□ 0.68
TSC2-201ENST00000219476 PDRG1Q9NUG6 133 aa19.27■□□□□ 0.68
TSC2-201ENST00000219476 ATF7IPQ6VMQ6 1270 aa19.27■□□□□ 0.67
TSC2-201ENST00000219476 TTC21AQ8NDW8 1320 aa19.26■□□□□ 0.67
TSC2-201ENST00000219476 SH3BP5O60239 455 aa19.26■□□□□ 0.67
TSC2-201ENST00000219476 WDR33Q9C0J8 1336 aaKnown RBP19.26■□□□□ 0.67
TSC2-201ENST00000219476 FSD2A1L4K1 749 aa19.26■□□□□ 0.67
TSC2-201ENST00000219476 BICD1Q96G01 975 aa19.26■□□□□ 0.67
TSC2-201ENST00000219476 SERPINA10Q9UK55 444 aa19.26■□□□□ 0.67
TSC2-201ENST00000219476 TMCO3Q6UWJ1 677 aa19.26■□□□□ 0.67
TSC2-201ENST00000219476 C1orf115Q9H7X2 142 aa19.26■□□□□ 0.67
TSC2-201ENST00000219476 GBP3Q9H0R5 595 aa19.25■□□□□ 0.67
TSC2-201ENST00000219476 IFIT1P09914 478 aaKnown RBP19.25■□□□□ 0.67
TSC2-201ENST00000219476 TRMT1LQ7Z2T5 733 aaKnown RBP19.25■□□□□ 0.67
TSC2-201ENST00000219476 SAMM50Q9Y512 469 aa19.25■□□□□ 0.67
TSC2-201ENST00000219476 MYO1BO43795 1136 aa19.25■□□□□ 0.67
TSC2-201ENST00000219476 STXBP4Q6ZWJ1 553 aa19.25■□□□□ 0.67
TSC2-201ENST00000219476 TAF12Q16514 161 aa19.25■□□□□ 0.67
TSC2-201ENST00000219476 TIGD1Q96MW7 591 aa19.25■□□□□ 0.67
TSC2-201ENST00000219476 PODXL2Q9NZ53 605 aa19.25■□□□□ 0.67
TSC2-201ENST00000219476 VPS8Q8N3P4 1428 aa19.25■□□□□ 0.67
TSC2-201ENST00000219476 BTBD11A6QL63 1104 aa19.25■□□□□ 0.67
TSC2-201ENST00000219476 KRT32Q14532 448 aa19.25■□□□□ 0.67
TSC2-201ENST00000219476 C6orf163Q5TEZ5 329 aa19.24■□□□□ 0.67
TSC2-201ENST00000219476 PHAXQ9H814 394 aaKnown RBP19.24■□□□□ 0.67
TSC2-201ENST00000219476 CABP5Q9NP86 173 aa19.24■□□□□ 0.67
TSC2-201ENST00000219476 PRKAR2BP31323 418 aa19.24■□□□□ 0.67
TSC2-201ENST00000219476 DNA2P51530 1060 aa19.24■□□□□ 0.67
TSC2-201ENST00000219476 TICAM2Q86XR7 235 aa19.24■□□□□ 0.67
TSC2-201ENST00000219476 SYNCQ9H7C4 482 aa19.24■□□□□ 0.67
TSC2-201ENST00000219476 IKBKGQ9Y6K9 419 aa19.24■□□□□ 0.67
TSC2-201ENST00000219476 TMCO5BA8MYB1 307 aa19.24■□□□□ 0.67
TSC2-201ENST00000219476 CCDC175P0C221 793 aa19.24■□□□□ 0.67
TSC2-201ENST00000219476 CFAP100Q494V2 611 aa19.23■□□□□ 0.67
TSC2-201ENST00000219476 SYCP3Q8IZU3 236 aa19.23■□□□□ 0.67
TSC2-201ENST00000219476 THEMISQ8N1K5 641 aaPredicted RBP19.23■□□□□ 0.67
TSC2-201ENST00000219476 CTCFLQ8NI51 663 aaPredicted RBP19.23■□□□□ 0.67
TSC2-201ENST00000219476 GCC1Q96CN9 775 aa19.23■□□□□ 0.67
TSC2-201ENST00000219476 AKAP2Q9Y2D5 859 aa19.23■□□□□ 0.67
TSC2-201ENST00000219476 PRC1O43663 620 aa19.23■□□□□ 0.67
TSC2-201ENST00000219476 MAP9Q49MG5 647 aa19.22■□□□□ 0.67
TSC2-201ENST00000219476 TDRD12Q587J7 1177 aaKnown RBP19.22■□□□□ 0.67
TSC2-201ENST00000219476 SPTY2D1Q68D10 685 aaPredicted RBP19.22■□□□□ 0.67
TSC2-201ENST00000219476 CCDC117Q8IWD4 279 aaPredicted RBP19.22■□□□□ 0.67
TSC2-201ENST00000219476 ZSCAN31Q96LW9 406 aaPredicted RBP19.22■□□□□ 0.67
TSC2-201ENST00000219476 TRAK2O60296 914 aa19.21■□□□□ 0.67
TSC2-201ENST00000219476 JAKMIP1Q96N16 626 aaKnown RBP19.21■□□□□ 0.67
TSC2-201ENST00000219476 TMOD3Q9NYL9 352 aa19.21■□□□□ 0.67
TSC2-201ENST00000219476 USO1O60763 962 aaKnown RBP19.2■□□□□ 0.66
TSC2-201ENST00000219476 MCM3P25205 808 aa19.2■□□□□ 0.66
TSC2-201ENST00000219476 NUP62CLQ9H1M0 184 aa19.2■□□□□ 0.66
TSC2-201ENST00000219476 ZBED9Q6R2W3 1325 aa19.2■□□□□ 0.66
TSC2-201ENST00000219476 FHOD3Q2V2M9 1422 aa19.2■□□□□ 0.66
TSC2-201ENST00000219476 CCDC174Q6PII3 467 aa19.2■□□□□ 0.66
TSC2-201ENST00000219476 UQCRHLA0A096LP55 91 aa19.2■□□□□ 0.66
TSC2-201ENST00000219476 CECR2Q9BXF3 1484 aa19.2■□□□□ 0.66
TSC2-201ENST00000219476 PPP6R1Q9UPN7 881 aa19.2■□□□□ 0.66
TSC2-201ENST00000219476 RANBP6O60518 1105 aaKnown RBP19.19■□□□□ 0.66
TSC2-201ENST00000219476 APBB1IPQ7Z5R6 666 aaPredicted RBP19.19■□□□□ 0.66
TSC2-201ENST00000219476 CCDC196A0A1B0GTZ2 297 aa19.19■□□□□ 0.66
TSC2-201ENST00000219476 CKAP2LQ8IYA6 745 aa19.19■□□□□ 0.66
TSC2-201ENST00000219476 C6orf229H3BNL8 230 aa19.19■□□□□ 0.66
TSC2-201ENST00000219476 KLHL10Q6JEL2 608 aa19.19■□□□□ 0.66
TSC2-201ENST00000219476 UQCRHP07919 91 aa19.19■□□□□ 0.66
TSC2-201ENST00000219476 TMEM132EQ6IEE7 984 aa19.19■□□□□ 0.66
TSC2-201ENST00000219476 KIF5CO60282 957 aa19.18■□□□□ 0.66
TSC2-201ENST00000219476 CASQ1P31415 396 aa19.18■□□□□ 0.66
TSC2-201ENST00000219476 TCERG1LQ5VWI1 586 aa19.18■□□□□ 0.66
TSC2-201ENST00000219476 CCDC194A0A1B0GVG4 234 aa19.18■□□□□ 0.66
TSC2-201ENST00000219476 SPECC1Q5M775 1068 aa19.18■□□□□ 0.66
TSC2-201ENST00000219476 NAPBQ9H115 298 aa19.18■□□□□ 0.66
TSC2-201ENST00000219476 PAFAH1B1P43034 410 aa19.18■□□□□ 0.66
TSC2-201ENST00000219476 BIN2Q9UBW5 565 aaPredicted RBP19.18■□□□□ 0.66
TSC2-201ENST00000219476 CWC27Q6UX04 472 aaKnown RBP19.18■□□□□ 0.66
TSC2-201ENST00000219476 A0A087WZG4 1122 aa19.17■□□□□ 0.66
TSC2-201ENST00000219476 SLC5A1P13866 664 aa19.17■□□□□ 0.66
TSC2-201ENST00000219476 PRPF4BQ13523 1007 aaKnown RBP19.17■□□□□ 0.66
TSC2-201ENST00000219476 SULT6B1Q6IMI4 303 aa19.17■□□□□ 0.66
TSC2-201ENST00000219476 IQCA1Q86XH1 822 aa19.17■□□□□ 0.66
TSC2-201ENST00000219476 ZNF622Q969S3 477 aaKnown RBP eCLIP19.17■□□□□ 0.663e-6■□□□□ 11.2
TSC2-201ENST00000219476 PKNOX2Q96KN3 472 aa19.17■□□□□ 0.66
TSC2-201ENST00000219476 NLRP5P59047 1200 aa19.17■□□□□ 0.66
TSC2-201ENST00000219476 FILIP1Q7Z7B0 1213 aa19.17■□□□□ 0.66
TSC2-201ENST00000219476 CNTLNQ9NXG0 1405 aa19.17■□□□□ 0.66
TSC2-201ENST00000219476 BIRC2Q13490 618 aa19.17■□□□□ 0.66
TSC2-201ENST00000219476 ANKLE2Q86XL3 938 aa19.17■□□□□ 0.66
TSC2-201ENST00000219476 CCDC40Q4G0X9 1142 aa19.17■□□□□ 0.66
TSC2-201ENST00000219476 CALML4Q96GE6 196 aa19.17■□□□□ 0.66
TSC2-201ENST00000219476 ODF2LQ9ULJ1 636 aa19.17■□□□□ 0.66
TSC2-201ENST00000219476 SRGAP3O43295 1099 aa19.16■□□□□ 0.66
TSC2-201ENST00000219476 RNF187Q5TA31 235 aaPredicted RBP19.16■□□□□ 0.66
TSC2-201ENST00000219476 HLA-DOAP06340 250 aa19.16■□□□□ 0.66
TSC2-201ENST00000219476 MICALCLQ6ZW33 695 aa19.16■□□□□ 0.66
TSC2-201ENST00000219476 MAP3K12Q12852 859 aa19.16■□□□□ 0.66
TSC2-201ENST00000219476 PRPF31Q8WWY3 499 aaKnown RBP19.15■□□□□ 0.66
TSC2-201ENST00000219476 NCBP1Q09161 790 aaKnown RBP19.15■□□□□ 0.66
TSC2-201ENST00000219476 DDX12PQ92771 950 aa19.15■□□□□ 0.66
TSC2-201ENST00000219476 ALS2CR12Q96Q35 445 aa19.15■□□□□ 0.66
TSC2-201ENST00000219476 NOB1Q9ULX3 412 aaKnown RBP19.15■□□□□ 0.66
TSC2-201ENST00000219476 STX6O43752 255 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms