RNA–Protein interactions for RNA: ENST00000218652.11

NDFIP2-201, Transcript of Nedd4 family interacting protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP2, Length 4,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP2-201ENST00000218652 WWC2Q6AWC2 1192 aa17.49■□□□□ 0.39
NDFIP2-201ENST00000218652 U3KPZ7 1027 aaPredicted RBP17.49■□□□□ 0.39
NDFIP2-201ENST00000218652 ZSCAN29Q8IWY8 852 aaPredicted RBP17.49■□□□□ 0.39
NDFIP2-201ENST00000218652 TNNT1P13805 278 aa17.48■□□□□ 0.39
NDFIP2-201ENST00000218652 CPLX3Q8WVH0 158 aa17.48■□□□□ 0.39
NDFIP2-201ENST00000218652 SSR1P43307 286 aaKnown RBP17.48■□□□□ 0.39
NDFIP2-201ENST00000218652 CLIP2Q9UDT6 1046 aa17.48■□□□□ 0.39
NDFIP2-201ENST00000218652 TOP1P11387 765 aaKnown RBP17.48■□□□□ 0.39
NDFIP2-201ENST00000218652 PTCD1O75127 700 aaKnown RBP17.47■□□□□ 0.39
NDFIP2-201ENST00000218652 EZRP15311 586 aaKnown RBP17.47■□□□□ 0.39
NDFIP2-201ENST00000218652 ZSCAN12O43309 604 aa17.47■□□□□ 0.39
NDFIP2-201ENST00000218652 CCDC148Q8NFR7 591 aa17.47■□□□□ 0.39
NDFIP2-201ENST00000218652 RBM5P52756 815 aaKnown RBP eCLIP17.47■□□□□ 0.39
NDFIP2-201ENST00000218652 ZC3H6P61129 1189 aaKnown RBP17.47■□□□□ 0.39
NDFIP2-201ENST00000218652 ANKRD18AQ8IVF6 992 aa17.47■□□□□ 0.39
NDFIP2-201ENST00000218652 GBP3Q9H0R5 595 aa17.47■□□□□ 0.39
NDFIP2-201ENST00000218652 MINDY4BA8MYZ0 360 aa17.46■□□□□ 0.39
NDFIP2-201ENST00000218652 C8orf76Q96K31 380 aa17.46■□□□□ 0.39
NDFIP2-201ENST00000218652 CCDC113Q9H0I3 377 aa17.46■□□□□ 0.39
NDFIP2-201ENST00000218652 CCDC8Q9H0W5 538 aaPredicted RBP17.46■□□□□ 0.39
NDFIP2-201ENST00000218652 PRDM11Q9NQV5 511 aa17.46■□□□□ 0.39
NDFIP2-201ENST00000218652 KIAA1107Q9UPP5 1409 aa17.46■□□□□ 0.39
NDFIP2-201ENST00000218652 WASF1Q92558 559 aa17.46■□□□□ 0.39
NDFIP2-201ENST00000218652 SPG7Q9UQ90 795 aa17.46■□□□□ 0.39
NDFIP2-201ENST00000218652 ANKRD30BQ9BXX2 1392 aa17.46■□□□□ 0.39
NDFIP2-201ENST00000218652 FGD5Q6ZNL6 1462 aa17.46■□□□□ 0.39
NDFIP2-201ENST00000218652 BIN1O00499 593 aa17.46■□□□□ 0.38
NDFIP2-201ENST00000218652 JAKMIP3Q5VZ66 844 aa17.45■□□□□ 0.38
NDFIP2-201ENST00000218652 CUX1P39880 1505 aa17.45■□□□□ 0.38
NDFIP2-201ENST00000218652 ERBINQ96RT1 1412 aa17.45■□□□□ 0.38
NDFIP2-201ENST00000218652 KIF5CO60282 957 aa17.45■□□□□ 0.38
NDFIP2-201ENST00000218652 SPA17Q15506 151 aa17.45■□□□□ 0.38
NDFIP2-201ENST00000218652 TAF7Q15545 349 aaPredicted RBP17.45■□□□□ 0.38
NDFIP2-201ENST00000218652 PPFIA3O75145 1194 aa17.44■□□□□ 0.38
NDFIP2-201ENST00000218652 METTL24Q5JXM2 366 aa17.44■□□□□ 0.38
NDFIP2-201ENST00000218652 TMX1Q9H3N1 280 aa17.44■□□□□ 0.38
NDFIP2-201ENST00000218652 PPP1R1BQ9UD71 204 aaPredicted RBP17.44■□□□□ 0.38
NDFIP2-201ENST00000218652 LIMCH1Q9UPQ0 1083 aa17.44■□□□□ 0.38
NDFIP2-201ENST00000218652 ZNF76P36508 570 aa17.44■□□□□ 0.38
NDFIP2-201ENST00000218652 CCDC61Q9Y6R9 512 aa17.44■□□□□ 0.38
NDFIP2-201ENST00000218652 ZNF397Q8NF99 534 aaPredicted RBP17.44■□□□□ 0.38
NDFIP2-201ENST00000218652 SH2B1Q9NRF2 756 aaPredicted RBP17.43■□□□□ 0.38
NDFIP2-201ENST00000218652 BICDL1Q6ZP65 573 aa17.43■□□□□ 0.38
NDFIP2-201ENST00000218652 DYDC1Q8WWB3 177 aa17.43■□□□□ 0.38
NDFIP2-201ENST00000218652 CGNQ9P2M7 1197 aaKnown RBP17.43■□□□□ 0.38
NDFIP2-201ENST00000218652 RTEL1-TNFRSF6BF6WH68 1400 aa17.43■□□□□ 0.38
NDFIP2-201ENST00000218652 CASKIN1Q8WXD9 1431 aa17.43■□□□□ 0.38
NDFIP2-201ENST00000218652 CCT2P78371 535 aaKnown RBP17.43■□□□□ 0.38
NDFIP2-201ENST00000218652 PANK2Q9BZ23 570 aa17.43■□□□□ 0.38
NDFIP2-201ENST00000218652 SLC52A1Q9NWF4 448 aa17.43■□□□□ 0.38
NDFIP2-201ENST00000218652 CEP131Q9UPN4 1083 aa17.43■□□□□ 0.38
NDFIP2-201ENST00000218652 ARAP1Q96P48 1450 aa17.42■□□□□ 0.38
NDFIP2-201ENST00000218652 ZNF165P49910 485 aa17.42■□□□□ 0.38
NDFIP2-201ENST00000218652 CACNA2D4Q7Z3S7 1137 aa17.42■□□□□ 0.38
NDFIP2-201ENST00000218652 GNAT3A8MTJ3 354 aa17.42■□□□□ 0.38
NDFIP2-201ENST00000218652 IFIT1P09914 478 aaKnown RBP17.42■□□□□ 0.38
NDFIP2-201ENST00000218652 LUZP1Q86V48 1076 aa17.42■□□□□ 0.38
NDFIP2-201ENST00000218652 GOLGA6L10A0A0M3HER8 536 aa17.42■□□□□ 0.38
NDFIP2-201ENST00000218652 PODXL2Q9NZ53 605 aa17.42■□□□□ 0.38
NDFIP2-201ENST00000218652 SPECC1Q5M775 1068 aa17.41■□□□□ 0.38
NDFIP2-201ENST00000218652 FSIP1Q8NA03 581 aa17.41■□□□□ 0.38
NDFIP2-201ENST00000218652 SHTN1A0MZ66 631 aa17.41■□□□□ 0.38
NDFIP2-201ENST00000218652 NAPBQ9H115 298 aa17.41■□□□□ 0.38
NDFIP2-201ENST00000218652 TRIM27P14373 513 aa17.41■□□□□ 0.38
NDFIP2-201ENST00000218652 ADCY5O95622 1261 aa17.41■□□□□ 0.38
NDFIP2-201ENST00000218652 GTF2F1P35269 517 aaKnown RBP eCLIP17.41■□□□□ 0.38
NDFIP2-201ENST00000218652 BAG4O95429 457 aaKnown RBP17.4■□□□□ 0.38
NDFIP2-201ENST00000218652 RBM27Q9P2N5 1060 aaKnown RBP17.4■□□□□ 0.38
NDFIP2-201ENST00000218652 ZSWIM4Q9H7M6 989 aa17.4■□□□□ 0.38
NDFIP2-201ENST00000218652 ZHX1Q9UKY1 873 aaPredicted RBP17.4■□□□□ 0.38
NDFIP2-201ENST00000218652 NSD3Q9BZ95 1437 aa17.4■□□□□ 0.38
NDFIP2-201ENST00000218652 PAFAH1B1P43034 410 aa17.4■□□□□ 0.38
NDFIP2-201ENST00000218652 CNNM3Q8NE01 707 aa17.4■□□□□ 0.38
NDFIP2-201ENST00000218652 HCLS1P14317 486 aaPredicted RBP17.4■□□□□ 0.38
NDFIP2-201ENST00000218652 AQRO60306 1485 aaKnown RBP eCLIP17.39■□□□□ 0.37
NDFIP2-201ENST00000218652 SPDYE4A6NLX3 237 aa17.39■□□□□ 0.37
NDFIP2-201ENST00000218652 IGHMBP2P38935 993 aaKnown RBP17.39■□□□□ 0.37
NDFIP2-201ENST00000218652 MAP2K1Q02750 393 aaPredicted RBP17.39■□□□□ 0.37
NDFIP2-201ENST00000218652 ISM2Q6H9L7 571 aa17.39■□□□□ 0.37
NDFIP2-201ENST00000218652 CASQ1P31415 396 aa17.39■□□□□ 0.37
NDFIP2-201ENST00000218652 TDRD12Q587J7 1177 aaKnown RBP17.39■□□□□ 0.37
NDFIP2-201ENST00000218652 GSTTP1A0A1W2PQM5 241 aa17.39■□□□□ 0.37
NDFIP2-201ENST00000218652 MAP9Q49MG5 647 aa17.39■□□□□ 0.37
NDFIP2-201ENST00000218652 FKBP15Q5T1M5 1219 aa17.39■□□□□ 0.37
NDFIP2-201ENST00000218652 TBC1D9Q6ZT07 1266 aa17.39■□□□□ 0.37
NDFIP2-201ENST00000218652 UBA5Q9GZZ9 404 aa17.39■□□□□ 0.37
NDFIP2-201ENST00000218652 MACROD2A1Z1Q3 448 aa17.38■□□□□ 0.37
NDFIP2-201ENST00000218652 LARP1Q6PKG0 1096 aaKnown RBP17.38■□□□□ 0.37
NDFIP2-201ENST00000218652 NUDT16Q96DE0 195 aaKnown RBP17.38■□□□□ 0.37
NDFIP2-201ENST00000218652 CCDC196A0A1B0GTZ2 297 aa17.38■□□□□ 0.37
NDFIP2-201ENST00000218652 GBP2P32456 591 aaPredicted RBP17.38■□□□□ 0.37
NDFIP2-201ENST00000218652 TSHZ3Q63HK5 1081 aa17.38■□□□□ 0.37
NDFIP2-201ENST00000218652 THEMISQ8N1K5 641 aaPredicted RBP17.38■□□□□ 0.37
NDFIP2-201ENST00000218652 INCENPQ9NQS7 918 aa17.38■□□□□ 0.37
NDFIP2-201ENST00000218652 TMC6Q7Z403 805 aa17.38■□□□□ 0.37
NDFIP2-201ENST00000218652 NUP88Q99567 741 aaPredicted RBP17.38■□□□□ 0.37
NDFIP2-201ENST00000218652 DDX19AQ9NUU7 478 aaKnown RBP17.38■□□□□ 0.37
NDFIP2-201ENST00000218652 ATAD2Q6PL18 1390 aa17.38■□□□□ 0.37
NDFIP2-201ENST00000218652 STX6O43752 255 aa17.38■□□□□ 0.37
NDFIP2-201ENST00000218652 PPP1R12BO60237 982 aaPredicted RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms