RNA–Protein interactions for RNA: ENST00000218548.10

ATP12A-201, Transcript of ATPase H+/K+ transporting non-gastric alpha2 subunit, humanhuman

TSL 1 (best) BASIC

Gene ATP12A, Length 3,732 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP12A-201ENST00000218548 PRAMEF22A3QJZ6 481 aa17.21■□□□□ 0.35
ATP12A-201ENST00000218548 ZSCAN23Q3MJ62 389 aa17.21■□□□□ 0.35
ATP12A-201ENST00000218548 RBSNQ9H1K0 784 aa17.21■□□□□ 0.35
ATP12A-201ENST00000218548 PPP1R42Q7Z4L9 355 aa17.2■□□□□ 0.34
ATP12A-201ENST00000218548 ZDHHC9Q9Y397 364 aa17.2■□□□□ 0.34
ATP12A-201ENST00000218548 PI4KAP2A4QPH2 592 aa17.19■□□□□ 0.34
ATP12A-201ENST00000218548 PI4KAP1Q8N8J0 262 aa17.19■□□□□ 0.34
ATP12A-201ENST00000218548 PTCH1Q13635 1447 aa17.19■□□□□ 0.34
ATP12A-201ENST00000218548 GPT2Q8TD30 523 aa17.19■□□□□ 0.34
ATP12A-201ENST00000218548 TMEM131LA2VDJ0 1609 aa17.19■□□□□ 0.34
ATP12A-201ENST00000218548 NEO1Q92859 1461 aa17.19■□□□□ 0.34
ATP12A-201ENST00000218548 GNAT3A8MTJ3 354 aa17.19■□□□□ 0.34
ATP12A-201ENST00000218548 PTMAP06454 111 aaKnown RBP17.19■□□□□ 0.34
ATP12A-201ENST00000218548 KCNA6P17658 529 aa17.19■□□□□ 0.34
ATP12A-201ENST00000218548 CHPF2Q9P2E5 772 aa17.19■□□□□ 0.34
ATP12A-201ENST00000218548 CIZ1Q9ULV3 898 aaPredicted RBP17.18■□□□□ 0.34
ATP12A-201ENST00000218548 VIRMAQ69YN4 1812 aaKnown RBP17.18■□□□□ 0.34
ATP12A-201ENST00000218548 MSNP26038 577 aaKnown RBP17.18■□□□□ 0.34
ATP12A-201ENST00000218548 LMBRD1Q9NUN5 540 aa17.18■□□□□ 0.34
ATP12A-201ENST00000218548 ESCO1Q5FWF5 840 aa17.17■□□□□ 0.34
ATP12A-201ENST00000218548 CCDC30Q5VVM6 783 aa17.17■□□□□ 0.34
ATP12A-201ENST00000218548 ZNF830Q96NB3 372 aaPredicted RBP17.17■□□□□ 0.34
ATP12A-201ENST00000218548 TMEM63CQ9P1W3 806 aa17.17■□□□□ 0.34
ATP12A-201ENST00000218548 TRHP20396 242 aaPredicted RBP17.17■□□□□ 0.34
ATP12A-201ENST00000218548 NDUFB9Q9Y6M9 179 aa17.17■□□□□ 0.34
ATP12A-201ENST00000218548 ARHGAP31Q2M1Z3 1444 aa17.17■□□□□ 0.34
ATP12A-201ENST00000218548 GADD45BO75293 160 aaPredicted RBP17.17■□□□□ 0.34
ATP12A-201ENST00000218548 KCNJ4P48050 445 aa17.17■□□□□ 0.34
ATP12A-201ENST00000218548 SKOR2Q2VWA4 1001 aaPredicted RBP17.17■□□□□ 0.34
ATP12A-201ENST00000218548 KLHDC4Q8TBB5 520 aa17.17■□□□□ 0.34
ATP12A-201ENST00000218548 CPSF1Q10570 1443 aaKnown RBP17.16■□□□□ 0.34
ATP12A-201ENST00000218548 BRPF1P55201 1214 aaPredicted RBP17.16■□□□□ 0.34
ATP12A-201ENST00000218548 NUCB2P80303 420 aa17.16■□□□□ 0.34
ATP12A-201ENST00000218548 MED14O60244 1454 aa17.16■□□□□ 0.34
ATP12A-201ENST00000218548 FOSBP53539 338 aa17.16■□□□□ 0.34
ATP12A-201ENST00000218548 CWF19L2Q2TBE0 894 aaKnown RBP17.16■□□□□ 0.34
ATP12A-201ENST00000218548 USP44Q9H0E7 712 aa17.16■□□□□ 0.34
ATP12A-201ENST00000218548 CCT4P50991 539 aaKnown RBP17.16■□□□□ 0.34
ATP12A-201ENST00000218548 ESYT1Q9BSJ8 1104 aa17.16■□□□□ 0.34
ATP12A-201ENST00000218548 ATP10DQ9P241 1426 aa17.15■□□□□ 0.34
ATP12A-201ENST00000218548 FIBPO43427 364 aa17.15■□□□□ 0.34
ATP12A-201ENST00000218548 R3HCC1Q9Y3T6 440 aaKnown RBP17.15■□□□□ 0.34
ATP12A-201ENST00000218548 PIK3R4Q99570 1358 aa17.15■□□□□ 0.34
ATP12A-201ENST00000218548 TEFQ10587 303 aa17.15■□□□□ 0.34
ATP12A-201ENST00000218548 NCBP3Q53F19 620 aaKnown RBP17.15■□□□□ 0.34
ATP12A-201ENST00000218548 KLHL40Q2TBA0 621 aa17.14■□□□□ 0.34
ATP12A-201ENST00000218548 PREX1Q8TCU6 1659 aa17.14■□□□□ 0.33
ATP12A-201ENST00000218548 FERMT3Q86UX7 667 aa17.14■□□□□ 0.33
ATP12A-201ENST00000218548 MYL6BP14649 208 aa17.14■□□□□ 0.33
ATP12A-201ENST00000218548 CHMLP26374 656 aa17.14■□□□□ 0.33
ATP12A-201ENST00000218548 HAP1P54257 671 aaPredicted RBP17.14■□□□□ 0.33
ATP12A-201ENST00000218548 TNRQ92752 1358 aa17.14■□□□□ 0.33
ATP12A-201ENST00000218548 C9orf78Q9NZ63 289 aaPredicted RBP17.13■□□□□ 0.33
ATP12A-201ENST00000218548 CLCN1P35523 988 aa17.13■□□□□ 0.33
ATP12A-201ENST00000218548 PSME1Q06323 249 aa17.13■□□□□ 0.33
ATP12A-201ENST00000218548 PTPRCP08575 1304 aa17.13■□□□□ 0.33
ATP12A-201ENST00000218548 SLC39A6Q13433 755 aa17.13■□□□□ 0.33
ATP12A-201ENST00000218548 MCCP23508 829 aa17.12■□□□□ 0.33
ATP12A-201ENST00000218548 ZC3H6P61129 1189 aaKnown RBP17.12■□□□□ 0.33
ATP12A-201ENST00000218548 FAM173BQ6P4H8 233 aa17.12■□□□□ 0.33
ATP12A-201ENST00000218548 VSIG10Q8N0Z9 540 aa17.12■□□□□ 0.33
ATP12A-201ENST00000218548 CCDC8Q9H0W5 538 aaPredicted RBP17.12■□□□□ 0.33
ATP12A-201ENST00000218548 HOXC9P31274 260 aa17.12■□□□□ 0.33
ATP12A-201ENST00000218548 NBPF6Q5VWK0 638 aa17.12■□□□□ 0.33
ATP12A-201ENST00000218548 KIAA1211Q6ZU35 1233 aa17.12■□□□□ 0.33
ATP12A-201ENST00000218548 NBPF4Q96M43 638 aa17.12■□□□□ 0.33
ATP12A-201ENST00000218548 SOS1Q07889 1333 aaPredicted RBP17.12■□□□□ 0.33
ATP12A-201ENST00000218548 NEURL4Q96JN8 1562 aa17.12■□□□□ 0.33
ATP12A-201ENST00000218548 GNAI3P08754 354 aa17.12■□□□□ 0.33
ATP12A-201ENST00000218548 PROSER3Q2NL68 480 aa17.12■□□□□ 0.33
ATP12A-201ENST00000218548 DNTTIP2Q5QJE6 756 aaKnown RBP17.11■□□□□ 0.33
ATP12A-201ENST00000218548 NECAB1Q8N987 351 aa17.11■□□□□ 0.33
ATP12A-201ENST00000218548 SRCIN1Q9C0H9 1055 aa17.11■□□□□ 0.33
ATP12A-201ENST00000218548 VPS37CA5D8V6 355 aaPredicted RBP17.11■□□□□ 0.33
ATP12A-201ENST00000218548 ATP7BP35670 1465 aa17.11■□□□□ 0.33
ATP12A-201ENST00000218548 STK3Q13188 491 aa17.11■□□□□ 0.33
ATP12A-201ENST00000218548 COL9A3Q14050 684 aaPredicted RBP17.11■□□□□ 0.33
ATP12A-201ENST00000218548 ZNF530Q6P9A1 599 aaPredicted RBP17.11■□□□□ 0.33
ATP12A-201ENST00000218548 RASEFQ8IZ41 740 aa17.11■□□□□ 0.33
ATP12A-201ENST00000218548 C17orf53Q8N3J3 647 aaPredicted RBP17.11■□□□□ 0.33
ATP12A-201ENST00000218548 FAM13BQ9NYF5 915 aa17.11■□□□□ 0.33
ATP12A-201ENST00000218548 CLTCQ00610 1675 aaKnown RBP17.1■□□□□ 0.33
ATP12A-201ENST00000218548 RGS12O14924 1447 aa17.1■□□□□ 0.33
ATP12A-201ENST00000218548 HSP90AA2PQ14568 343 aaPredicted RBP17.1■□□□□ 0.33
ATP12A-201ENST00000218548 DDX17Q92841 729 aaKnown RBP17.1■□□□□ 0.33
ATP12A-201ENST00000218548 ATP8B2P98198 1209 aa17.1■□□□□ 0.33
ATP12A-201ENST00000218548 EDC3Q96F86 508 aaKnown RBP17.1■□□□□ 0.33
ATP12A-201ENST00000218548 ZNF330Q9Y3S2 320 aaPredicted RBP17.1■□□□□ 0.33
ATP12A-201ENST00000218548 USP32Q8NFA0 1604 aa17.1■□□□□ 0.33
ATP12A-201ENST00000218548 CDK12Q9NYV4 1490 aaPredicted RBP17.1■□□□□ 0.33
ATP12A-201ENST00000218548 FAM177BA6PVY3 158 aa17.09■□□□□ 0.33
ATP12A-201ENST00000218548 CCDC83Q8IWF9 413 aa17.09■□□□□ 0.33
ATP12A-201ENST00000218548 RHPN1Q8TCX5 695 aa17.09■□□□□ 0.33
ATP12A-201ENST00000218548 NAP1L2Q9ULW6 460 aaPredicted RBP17.09■□□□□ 0.33
ATP12A-201ENST00000218548 CNPY2Q9Y2B0 182 aa17.09■□□□□ 0.33
ATP12A-201ENST00000218548 CHGBP05060 677 aa17.09■□□□□ 0.33
ATP12A-201ENST00000218548 CASTP20810 708 aaKnown RBP17.09■□□□□ 0.33
ATP12A-201ENST00000218548 TMEM2Q9UHN6 1383 aa17.09■□□□□ 0.33
ATP12A-201ENST00000218548 RIMS1Q86UR5 1692 aaKnown RBP17.08■□□□□ 0.33
ATP12A-201ENST00000218548 BTBD11A6QL63 1104 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms