RNA–Protein interactions for RNA: ENST00000217109.8

CSTF1-201, Transcript of cleavage stimulation factor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF1, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-201ENST00000217109 KIF1BPQ96EK5 621 aa11.77□□□□□ -0.52
CSTF1-201ENST00000217109 RBM27Q9P2N5 1060 aaKnown RBP11.77□□□□□ -0.52
CSTF1-201ENST00000217109 IQGAP1P46940 1657 aa11.77□□□□□ -0.53
CSTF1-201ENST00000217109 PRR36Q9H6K5 1346 aa11.77□□□□□ -0.53
CSTF1-201ENST00000217109 LRRC59Q96AG4 307 aaKnown RBP11.77□□□□□ -0.53
CSTF1-201ENST00000217109 CHPF2Q9P2E5 772 aa11.77□□□□□ -0.53
CSTF1-201ENST00000217109 GLI2P10070 1586 aa11.76□□□□□ -0.53
CSTF1-201ENST00000217109 ISY1Q9ULR0 285 aaKnown RBP11.76□□□□□ -0.53
CSTF1-201ENST00000217109 MBD3O95983 291 aa11.76□□□□□ -0.53
CSTF1-201ENST00000217109 TMX3Q96JJ7 454 aa11.76□□□□□ -0.53
CSTF1-201ENST00000217109 FLT4P35916 1363 aa11.76□□□□□ -0.53
CSTF1-201ENST00000217109 H3BQV1 296 aa11.76□□□□□ -0.53
CSTF1-201ENST00000217109 HSP90AA2PQ14568 343 aaPredicted RBP11.76□□□□□ -0.53
CSTF1-201ENST00000217109 IFFO2Q5TF58 517 aa11.76□□□□□ -0.53
CSTF1-201ENST00000217109 TULP4Q9NRJ4 1543 aa11.75□□□□□ -0.53
CSTF1-201ENST00000217109 ABCA9Q8IUA7 1624 aa11.75□□□□□ -0.53
CSTF1-201ENST00000217109 CSPP1Q1MSJ5 1256 aa11.75□□□□□ -0.53
CSTF1-201ENST00000217109 JAKMIP1Q96N16 626 aaKnown RBP11.75□□□□□ -0.53
CSTF1-201ENST00000217109 DNAJC2Q99543 621 aaKnown RBP11.75□□□□□ -0.53
CSTF1-201ENST00000217109 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.75□□□□□ -0.53
CSTF1-201ENST00000217109 TTC21AQ8NDW8 1320 aa11.75□□□□□ -0.53
CSTF1-201ENST00000217109 PNMA6EA0A0J9YXQ4 647 aa11.75□□□□□ -0.53
CSTF1-201ENST00000217109 CCDC173Q0VFZ6 552 aa11.75□□□□□ -0.53
CSTF1-201ENST00000217109 INO80Q9ULG1 1556 aaPredicted RBP11.75□□□□□ -0.53
CSTF1-201ENST00000217109 ZNF853P0CG23 659 aa11.75□□□□□ -0.53
CSTF1-201ENST00000217109 CASTP20810 708 aaKnown RBP11.75□□□□□ -0.53
CSTF1-201ENST00000217109 ATP8B2P98198 1209 aa11.75□□□□□ -0.53
CSTF1-201ENST00000217109 RNF20Q5VTR2 975 aa11.75□□□□□ -0.53
CSTF1-201ENST00000217109 FAM184AQ8NB25 1140 aa11.75□□□□□ -0.53
CSTF1-201ENST00000217109 CCDC8Q9H0W5 538 aaPredicted RBP11.75□□□□□ -0.53
CSTF1-201ENST00000217109 STK3Q13188 491 aa11.74□□□□□ -0.53
CSTF1-201ENST00000217109 ATF3P18847 181 aa11.74□□□□□ -0.53
CSTF1-201ENST00000217109 RHPN1Q8TCX5 695 aa11.74□□□□□ -0.53
CSTF1-201ENST00000217109 JARID2Q92833 1246 aaPredicted RBP11.74□□□□□ -0.53
CSTF1-201ENST00000217109 ESYT1Q9BSJ8 1104 aa11.74□□□□□ -0.53
CSTF1-201ENST00000217109 QRICH2Q9H0J4 1663 aa11.74□□□□□ -0.53
CSTF1-201ENST00000217109 PRPF40BQ6NWY9 871 aaKnown RBP11.74□□□□□ -0.53
CSTF1-201ENST00000217109 HOXC9P31274 260 aa11.74□□□□□ -0.53
CSTF1-201ENST00000217109 BOLA2Q9H3K6 86 aa11.74□□□□□ -0.53
CSTF1-201ENST00000217109 DTNBO60941 627 aa11.73□□□□□ -0.53
CSTF1-201ENST00000217109 KLHL40Q2TBA0 621 aa11.73□□□□□ -0.53
CSTF1-201ENST00000217109 MAP3K2Q9Y2U5 619 aa11.73□□□□□ -0.53
CSTF1-201ENST00000217109 R3HCC1Q9Y3T6 440 aaKnown RBP11.73□□□□□ -0.53
CSTF1-201ENST00000217109 WDR33Q9C0J8 1336 aaKnown RBP11.73□□□□□ -0.53
CSTF1-201ENST00000217109 KCNH5Q8NCM2 988 aa11.73□□□□□ -0.53
CSTF1-201ENST00000217109 CYP46A1Q9Y6A2 500 aa11.73□□□□□ -0.53
CSTF1-201ENST00000217109 PLEKHG3A1L390 1219 aa11.73□□□□□ -0.53
CSTF1-201ENST00000217109 GLRX3O76003 335 aaKnown RBP11.72□□□□□ -0.53
CSTF1-201ENST00000217109 FERMT3Q86UX7 667 aa11.72□□□□□ -0.53
CSTF1-201ENST00000217109 CCDC83Q8IWF9 413 aa11.72□□□□□ -0.53
CSTF1-201ENST00000217109 DBF4Q9UBU7 674 aaPredicted RBP11.72□□□□□ -0.53
CSTF1-201ENST00000217109 RAB11FIP3O75154 756 aa11.72□□□□□ -0.53
CSTF1-201ENST00000217109 RRAGDQ9NQL2 400 aaPredicted RBP11.72□□□□□ -0.53
CSTF1-201ENST00000217109 KIDINS220Q9ULH0 1771 aa11.72□□□□□ -0.53
CSTF1-201ENST00000217109 TMEM2Q9UHN6 1383 aa11.72□□□□□ -0.53
CSTF1-201ENST00000217109 ERC1Q8IUD2 1116 aa11.72□□□□□ -0.53
CSTF1-201ENST00000217109 BICD2Q8TD16 824 aa11.72□□□□□ -0.53
CSTF1-201ENST00000217109 TSPY26PQ9H489 355 aa11.72□□□□□ -0.53
CSTF1-201ENST00000217109 LGR6Q9HBX8 967 aa11.72□□□□□ -0.53
CSTF1-201ENST00000217109 PIK3R4Q99570 1358 aa11.72□□□□□ -0.53
CSTF1-201ENST00000217109 ROBO2Q9HCK4 1378 aa11.72□□□□□ -0.53
CSTF1-201ENST00000217109 FAM135BQ49AJ0 1406 aa11.72□□□□□ -0.53
CSTF1-201ENST00000217109 CHAMP1Q96JM3 812 aa11.72□□□□□ -0.53
CSTF1-201ENST00000217109 FAM13BQ9NYF5 915 aa11.72□□□□□ -0.53
CSTF1-201ENST00000217109 PA2G4Q9UQ80 394 aaKnown RBP11.72□□□□□ -0.53
CSTF1-201ENST00000217109 RTL1A6NKG5 1358 aa11.71□□□□□ -0.53
CSTF1-201ENST00000217109 ARHGAP31Q2M1Z3 1444 aa11.71□□□□□ -0.53
CSTF1-201ENST00000217109 TATP17735 454 aaPredicted RBP11.71□□□□□ -0.53
CSTF1-201ENST00000217109 CHAF1AQ13111 956 aaPredicted RBP11.71□□□□□ -0.53
CSTF1-201ENST00000217109 PKP1Q13835 747 aa11.71□□□□□ -0.53
CSTF1-201ENST00000217109 PDRG1Q9NUG6 133 aa11.71□□□□□ -0.53
CSTF1-201ENST00000217109 BRPF1P55201 1214 aaPredicted RBP11.71□□□□□ -0.54
CSTF1-201ENST00000217109 SLC39A6Q13433 755 aa11.71□□□□□ -0.54
CSTF1-201ENST00000217109 SETBP1Q9Y6X0 1596 aa11.71□□□□□ -0.54
CSTF1-201ENST00000217109 PIP4K2AP48426 406 aaPredicted RBP11.71□□□□□ -0.54
CSTF1-201ENST00000217109 ZSCAN23Q3MJ62 389 aa11.71□□□□□ -0.54
CSTF1-201ENST00000217109 GNL2Q13823 731 aaKnown RBP11.7□□□□□ -0.54
CSTF1-201ENST00000217109 LMTK2Q8IWU2 1503 aa11.7□□□□□ -0.54
CSTF1-201ENST00000217109 CHMLP26374 656 aa11.7□□□□□ -0.54
CSTF1-201ENST00000217109 IL17REQ8NFR9 667 aa11.7□□□□□ -0.54
CSTF1-201ENST00000217109 TBX22Q9Y458 520 aa11.7□□□□□ -0.54
CSTF1-201ENST00000217109 PNPLA6Q8IY17 1366 aa11.7□□□□□ -0.54
CSTF1-201ENST00000217109 HTATSF1O43719 755 aaKnown RBP11.7□□□□□ -0.54
CSTF1-201ENST00000217109 EVA1CP58658 441 aa11.7□□□□□ -0.54
CSTF1-201ENST00000217109 CEBPZQ03701 1054 aaKnown RBP11.7□□□□□ -0.54
CSTF1-201ENST00000217109 CWF19L2Q2TBE0 894 aaKnown RBP11.7□□□□□ -0.54
CSTF1-201ENST00000217109 LARP1BQ659C4 914 aaKnown RBP11.7□□□□□ -0.54
CSTF1-201ENST00000217109 CFAP74Q9C0B2 1584 aa11.7□□□□□ -0.54
CSTF1-201ENST00000217109 FBXW7Q969H0 707 aa11.69□□□□□ -0.54
CSTF1-201ENST00000217109 NBPF7P0C2Y1 421 aaPredicted RBP11.69□□□□□ -0.54
CSTF1-201ENST00000217109 PSMA5P28066 241 aa11.69□□□□□ -0.54
CSTF1-201ENST00000217109 TCEANC2Q96MN5 208 aa11.69□□□□□ -0.54
CSTF1-201ENST00000217109 ADGRB1O14514 1584 aa11.69□□□□□ -0.54
CSTF1-201ENST00000217109 AATKQ6ZMQ8 1374 aa11.69□□□□□ -0.54
CSTF1-201ENST00000217109 MYD88Q99836 296 aa11.69□□□□□ -0.54
CSTF1-201ENST00000217109 CPA1P15085 419 aa11.69□□□□□ -0.54
CSTF1-201ENST00000217109 SF3A1Q15459 793 aaKnown RBP11.69□□□□□ -0.54
CSTF1-201ENST00000217109 ANKRD24Q8TF21 1146 aa11.69□□□□□ -0.54
CSTF1-201ENST00000217109 ECHDC1Q9NTX5 307 aa11.69□□□□□ -0.54
CSTF1-201ENST00000217109 NRXN1Q9ULB1 1477 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms